RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 TNNQ9UQP3 1299 aa9.52□□□□□ -0.88
CNTNAP3B-205ENST00000476961 SUGT1Q9Y2Z0 365 aa9.52□□□□□ -0.88
CNTNAP3B-205ENST00000476961 TIMM44O43615 452 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 KIF5CO60282 957 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 SMC1AQ14683 1233 aaKnown RBP9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 NBPF15Q8N660 670 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 LSM14AQ8ND56 463 aaKnown RBP9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 FAM81AQ8TBF8 368 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 BABAM1Q9NWV8 329 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 PNMA2Q9UL42 364 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 PKD1L3Q7Z443 1732 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 JCADQ9P266 1359 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 ADAMTS7Q9UKP4 1686 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 CHUKO15111 745 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 PRPF40AO75400 957 aaKnown RBP9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 SLU7O95391 586 aaKnown RBP9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 CYP2E1P05181 493 aaPredicted RBP9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 IL2RBP14784 551 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 MPP3Q13368 585 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 TMCO3Q6UWJ1 677 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 IQCA1Q86XH1 822 aa9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 SYAP1Q96A49 352 aaPredicted RBP9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 PUF60Q9UHX1 559 aaKnown RBP9.52□□□□□ -0.89
CNTNAP3B-205ENST00000476961 KDM6AO15550 1401 aaPredicted RBP9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 SKAP2O75563 359 aaPredicted RBP9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 CLNS1AP54105 237 aaKnown RBP9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 PDE3AQ14432 1141 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 RRP12Q5JTH9 1297 aaKnown RBP9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 CEP135Q66GS9 1140 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 IFNL2Q8IZJ0 200 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 MRPL50Q8N5N7 158 aaKnown RBP9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 PANK1Q8TE04 598 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 DDX11Q96FC9 970 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 FAM81BQ96LP2 452 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 EPAS1Q99814 870 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 RGL1Q9NZL6 768 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 COG6Q9Y2V7 657 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 AK9Q5TCS8 1911 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 TEFQ10587 303 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 ZNF394Q53GI3 561 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 SYNE3Q6ZMZ3 975 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 KIAA1328Q86T90 577 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 TMEM110Q86TL2 294 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 NOB1Q9ULX3 412 aaKnown RBP9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 MAPK8IP1Q9UQF2 711 aa9.51□□□□□ -0.89
CNTNAP3B-205ENST00000476961 PLCH1Q4KWH8 1693 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 SPDYE3A6NKU9 549 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 ATP6V1G1O75348 118 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 MBD3O95983 291 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 NBPF7P0C2Y1 421 aaPredicted RBP9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 EIF4BP23588 611 aaKnown RBP9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 STIP1P31948 543 aaKnown RBP9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 ISM2Q6H9L7 571 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 ARMC9Q7Z3E5 817 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 OR8K1Q8NGG5 319 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 TRPV5Q9NQA5 729 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 NSFL1CQ9UNZ2 370 aaKnown RBP9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 PARP4Q9UKK3 1724 aaKnown RBP9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 KCNQ3O43525 872 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 RCSD1Q6JBY9 416 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 PARP9Q8IXQ6 854 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 CABS1Q96KC9 395 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 RTEL1Q9NZ71 1219 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 ITM2BQ9Y287 266 aa9.5□□□□□ -0.89
CNTNAP3B-205ENST00000476961 DISP2A7MBM2 1401 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 BTBD11A6QL63 1104 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 K7ELQ4 463 aaPredicted RBP9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 OPA1O60313 960 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 CCDC175P0C221 793 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 HSPA1LP34931 641 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 CDR1P51861 262 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 SESN3P58005 492 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 TMED1Q13445 227 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 WDR78Q5VTH9 848 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 RMDN2Q96LZ7 410 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 DUSP9Q99956 384 aaKnown RBP9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 FOXD4L1Q9NU39 408 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 ARGLU1Q9NWB6 273 aaPredicted RBP9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 CTDP1Q9Y5B0 961 aaPredicted RBP9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 SLIT2O94813 1529 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 NRAPQ86VF7 1730 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 PCDH11XQ9BZA7 1347 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 PCDH11YQ9BZA8 1340 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 ENO4A6NNW6 628 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 KRT38O76015 456 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 TRIM27P14373 513 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 HOXA10P31260 410 aaPredicted RBP9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 LIG3P49916 1009 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 SLC8A3P57103 927 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 EIF4A1P60842 406 aaKnown RBP9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 MECOMQ03112 1051 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 ERCC6LQ2NKX8 1250 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 KLHL10Q6JEL2 608 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 CLUAP1Q96AJ1 413 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 DCAF5Q96JK2 942 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 MTRQ99707 1265 aa9.49□□□□□ -0.89
CNTNAP3B-205ENST00000476961 SMARCA5O60264 1052 aaPredicted RBP9.48□□□□□ -0.89
CNTNAP3B-205ENST00000476961 E2F6O75461 281 aa9.48□□□□□ -0.89
CNTNAP3B-205ENST00000476961 SASH3O75995 380 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms