RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 KIAA1468Q9P260 1216 aa24.47■■□□□ 1.51
LIMS2-214ENST00000476932 RREB1Q92766 1687 aa24.47■■□□□ 1.51
LIMS2-214ENST00000476932 ARID5BQ14865 1188 aa24.47■■□□□ 1.51
LIMS2-214ENST00000476932 GLIPR1L2Q4G1C9 344 aa24.47■■□□□ 1.51
LIMS2-214ENST00000476932 DPCR1Q3MIW9 517 aa24.46■■□□□ 1.51
LIMS2-214ENST00000476932 ALG1Q9BT22 464 aa24.46■■□□□ 1.51
LIMS2-214ENST00000476932 LY9Q9HBG7 655 aa24.46■■□□□ 1.51
LIMS2-214ENST00000476932 TACC3Q9Y6A5 838 aa24.46■■□□□ 1.51
LIMS2-214ENST00000476932 FAM177BA6PVY3 158 aa24.46■■□□□ 1.51
LIMS2-214ENST00000476932 RASGRF1Q13972 1273 aa24.46■■□□□ 1.51
LIMS2-214ENST00000476932 NTRK3Q16288 839 aa24.46■■□□□ 1.51
LIMS2-214ENST00000476932 LRRC8AQ8IWT6 810 aa24.46■■□□□ 1.51
LIMS2-214ENST00000476932 SPATA5Q8NB90 893 aa24.46■■□□□ 1.51
LIMS2-214ENST00000476932 SYTL4Q96C24 671 aaPredicted RBP24.46■■□□□ 1.51
LIMS2-214ENST00000476932 SNAP23O00161 211 aa24.45■■□□□ 1.5
LIMS2-214ENST00000476932 WDHD1O75717 1129 aaPredicted RBP24.45■■□□□ 1.5
LIMS2-214ENST00000476932 SYNE3Q6ZMZ3 975 aa24.45■■□□□ 1.5
LIMS2-214ENST00000476932 AIDAQ96BJ3 306 aa24.45■■□□□ 1.5
LIMS2-214ENST00000476932 TMEM87BQ96K49 555 aa24.45■■□□□ 1.5
LIMS2-214ENST00000476932 INCENPQ9NQS7 918 aa24.45■■□□□ 1.5
LIMS2-214ENST00000476932 FAM217BQ9NTX9 383 aaPredicted RBP24.45■■□□□ 1.5
LIMS2-214ENST00000476932 KRT40Q6A162 431 aa24.45■■□□□ 1.5
LIMS2-214ENST00000476932 SGMS1Q86VZ5 419 aa24.45■■□□□ 1.5
LIMS2-214ENST00000476932 VPS37DQ86XT2 251 aa24.45■■□□□ 1.5
LIMS2-214ENST00000476932 PHKBQ93100 1093 aa24.45■■□□□ 1.5
LIMS2-214ENST00000476932 FBXW7Q969H0 707 aa24.45■■□□□ 1.5
LIMS2-214ENST00000476932 RANBP6O60518 1105 aaKnown RBP24.44■■□□□ 1.5
LIMS2-214ENST00000476932 PFKFB1P16118 471 aa24.44■■□□□ 1.5
LIMS2-214ENST00000476932 CMA1P23946 247 aa24.44■■□□□ 1.5
LIMS2-214ENST00000476932 CHAF1AQ13111 956 aaPredicted RBP24.44■■□□□ 1.5
LIMS2-214ENST00000476932 SLC39A14Q15043 492 aa24.44■■□□□ 1.5
LIMS2-214ENST00000476932 MICU3Q86XE3 530 aa24.44■■□□□ 1.5
LIMS2-214ENST00000476932 AK7Q96M32 723 aa24.44■■□□□ 1.5
LIMS2-214ENST00000476932 NAT10Q9H0A0 1025 aaKnown RBP24.44■■□□□ 1.5
LIMS2-214ENST00000476932 MYH14Q7Z406 1995 aaKnown RBP24.44■■□□□ 1.5
LIMS2-214ENST00000476932 COL22A1Q8NFW1 1626 aaPredicted RBP24.44■■□□□ 1.5
LIMS2-214ENST00000476932 CDKL5O76039 1030 aa24.44■■□□□ 1.5
LIMS2-214ENST00000476932 ZNF202O95125 648 aa24.44■■□□□ 1.5
LIMS2-214ENST00000476932 SUSD4Q5VX71 490 aa24.44■■□□□ 1.5
LIMS2-214ENST00000476932 C16orf45Q96MC5 204 aaPredicted RBP24.44■■□□□ 1.5
LIMS2-214ENST00000476932 BPIFA3Q9BQP9 254 aa24.44■■□□□ 1.5
LIMS2-214ENST00000476932 BCL2L12Q9HB09 334 aa24.44■■□□□ 1.5
LIMS2-214ENST00000476932 EIF5P55010 431 aaKnown RBP24.43■■□□□ 1.5
LIMS2-214ENST00000476932 IFNL3Q8IZI9 196 aa24.43■■□□□ 1.5
LIMS2-214ENST00000476932 MAGEB6Q8N7X4 407 aa24.43■■□□□ 1.5
LIMS2-214ENST00000476932 MBD4O95243 580 aa24.42■■□□□ 1.5
LIMS2-214ENST00000476932 SLC5A1P13866 664 aa24.42■■□□□ 1.5
LIMS2-214ENST00000476932 RBM6P78332 1123 aaKnown RBP24.42■■□□□ 1.5
LIMS2-214ENST00000476932 COL4A1P02462 1669 aa24.42■■□□□ 1.5
LIMS2-214ENST00000476932 PATL2C9JE40 543 aaKnown RBP24.42■■□□□ 1.5
LIMS2-214ENST00000476932 EXOC5O00471 708 aa24.42■■□□□ 1.5
LIMS2-214ENST00000476932 ZBTB43O43298 467 aa24.42■■□□□ 1.5
LIMS2-214ENST00000476932 PTPAQ15257 358 aa24.42■■□□□ 1.5
LIMS2-214ENST00000476932 NBPF11Q86T75 865 aa24.42■■□□□ 1.5
LIMS2-214ENST00000476932 MYL10Q9BUA6 226 aa24.42■■□□□ 1.5
LIMS2-214ENST00000476932 A0A1B0GUL6 1792 aa24.42■■□□□ 1.5
LIMS2-214ENST00000476932 CTIFO43310 598 aaKnown RBP24.41■■□□□ 1.5
LIMS2-214ENST00000476932 INTS5Q6P9B9 1019 aaKnown RBP24.41■■□□□ 1.5
LIMS2-214ENST00000476932 SEC31BQ9NQW1 1179 aa24.41■■□□□ 1.5
LIMS2-214ENST00000476932 SLC3A2P08195 630 aaKnown RBP24.41■■□□□ 1.5
LIMS2-214ENST00000476932 MARCKSP29966 332 aaPredicted RBP24.41■■□□□ 1.5
LIMS2-214ENST00000476932 CCZ1BP86790 482 aa24.41■■□□□ 1.5
LIMS2-214ENST00000476932 CCZ1P86791 482 aaPredicted RBP24.41■■□□□ 1.5
LIMS2-214ENST00000476932 CTDSPL2Q05D32 466 aa24.41■■□□□ 1.5
LIMS2-214ENST00000476932 MAP3K14Q99558 947 aa24.41■■□□□ 1.5
LIMS2-214ENST00000476932 ARMT1Q9H993 441 aa24.41■■□□□ 1.5
LIMS2-214ENST00000476932 CICQ96RK0 1608 aaPredicted RBP24.41■■□□□ 1.5
LIMS2-214ENST00000476932 NID2Q14112 1375 aa24.4■■□□□ 1.5
LIMS2-214ENST00000476932 GOLGA8AA7E2F4 631 aa24.4■■□□□ 1.5
LIMS2-214ENST00000476932 UBE2Q2LH0YL09 131 aa24.4■■□□□ 1.5
LIMS2-214ENST00000476932 NEMFO60524 1076 aa24.4■■□□□ 1.5
LIMS2-214ENST00000476932 LIFRP42702 1097 aa24.4■■□□□ 1.5
LIMS2-214ENST00000476932 TMEM67Q5HYA8 995 aa24.4■■□□□ 1.5
LIMS2-214ENST00000476932 HPSEQ9Y251 543 aa24.4■■□□□ 1.5
LIMS2-214ENST00000476932 BCL9LQ86UU0 1499 aa24.4■■□□□ 1.5
LIMS2-214ENST00000476932 GSG1L2A8MUP6 293 aa24.4■■□□□ 1.5
LIMS2-214ENST00000476932 U2AF2P26368 475 aaKnown RBP eCLIP24.4■■□□□ 1.5
LIMS2-214ENST00000476932 ZSWIM5Q9P217 1185 aa24.4■■□□□ 1.5
LIMS2-214ENST00000476932 NLRP12P59046 1061 aa24.39■■□□□ 1.5
LIMS2-214ENST00000476932 MAP3K12Q12852 859 aa24.39■■□□□ 1.5
LIMS2-214ENST00000476932 NAPBQ9H115 298 aa24.39■■□□□ 1.5
LIMS2-214ENST00000476932 CASZ1Q86V15 1759 aa24.39■■□□□ 1.49
LIMS2-214ENST00000476932 STK36Q9NRP7 1315 aa24.39■■□□□ 1.49
LIMS2-214ENST00000476932 CCDC69A6NI79 296 aa24.38■■□□□ 1.49
LIMS2-214ENST00000476932 PPP6R2O75170 966 aa24.38■■□□□ 1.49
LIMS2-214ENST00000476932 CPLX2Q6PUV4 134 aaKnown RBP24.38■■□□□ 1.49
LIMS2-214ENST00000476932 SHC4Q6S5L8 630 aa24.38■■□□□ 1.49
LIMS2-214ENST00000476932 USP27XA6NNY8 438 aa24.38■■□□□ 1.49
LIMS2-214ENST00000476932 BIN1O00499 593 aa24.38■■□□□ 1.49
LIMS2-214ENST00000476932 TNNT1P13805 278 aa24.38■■□□□ 1.49
LIMS2-214ENST00000476932 IARSP41252 1262 aaKnown RBP24.38■■□□□ 1.49
LIMS2-214ENST00000476932 NCAPHQ15003 741 aa24.38■■□□□ 1.49
LIMS2-214ENST00000476932 NFXL1Q6ZNB6 911 aa24.38■■□□□ 1.49
LIMS2-214ENST00000476932 FILIP1Q7Z7B0 1213 aa24.38■■□□□ 1.49
LIMS2-214ENST00000476932 FAM237AA0A1B0GTK4 181 aa24.37■■□□□ 1.49
LIMS2-214ENST00000476932 PRKAB2O43741 272 aa24.37■■□□□ 1.49
LIMS2-214ENST00000476932 TIGD1Q96MW7 591 aa24.37■■□□□ 1.49
LIMS2-214ENST00000476932 AKNAD1Q5T1N1 836 aa24.37■■□□□ 1.49
LIMS2-214ENST00000476932 LCORLQ8N3X6 602 aa24.37■■□□□ 1.49
LIMS2-214ENST00000476932 CCDC87Q9NVE4 849 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms