RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 TDO2P48775 406 aa34.29■■■■□ 3.08
VEGFA-211ENST00000476772 MCM2P49736 904 aa34.29■■■■□ 3.08
VEGFA-211ENST00000476772 FER1L6Q2WGJ9 1857 aa34.29■■■■□ 3.08
VEGFA-211ENST00000476772 RPS6KB1P23443 525 aa34.28■■■■□ 3.08
VEGFA-211ENST00000476772 STRIP1Q5VSL9 837 aa34.28■■■■□ 3.08
VEGFA-211ENST00000476772 NOL8Q76FK4 1167 aaKnown RBP34.28■■■■□ 3.08
VEGFA-211ENST00000476772 SPRYD3Q8NCJ5 442 aa34.28■■■■□ 3.08
VEGFA-211ENST00000476772 BCS1LQ9Y276 419 aa34.28■■■■□ 3.08
VEGFA-211ENST00000476772 AK2P54819 239 aa34.28■■■■□ 3.08
VEGFA-211ENST00000476772 GOLGB1Q14789 3259 aaKnown RBP34.27■■■■□ 3.08
VEGFA-211ENST00000476772 CRNKL1Q9BZJ0 848 aaKnown RBP34.27■■■■□ 3.08
VEGFA-211ENST00000476772 NBPF3Q9H094 633 aa34.27■■■■□ 3.08
VEGFA-211ENST00000476772 COL4A5P29400 1685 aa34.27■■■■□ 3.08
VEGFA-211ENST00000476772 YDJCA8MPS7 323 aa34.26■■■■□ 3.08
VEGFA-211ENST00000476772 F8W031 263 aaPredicted RBP34.26■■■■□ 3.08
VEGFA-211ENST00000476772 SLF2Q8IX21 1173 aa34.26■■■■□ 3.08
VEGFA-211ENST00000476772 LARGE2Q8N3Y3 721 aa34.26■■■■□ 3.08
VEGFA-211ENST00000476772 USP17L3A6NCW0 530 aa34.25■■■■□ 3.07
VEGFA-211ENST00000476772 USP17L4A6NCW7 530 aa34.25■■■■□ 3.07
VEGFA-211ENST00000476772 DACT2Q5SW24 774 aa34.25■■■■□ 3.07
VEGFA-211ENST00000476772 USP17L1Q7RTZ2 530 aa34.25■■■■□ 3.07
VEGFA-211ENST00000476772 NOL10Q9BSC4 688 aaKnown RBP34.25■■■■□ 3.07
VEGFA-211ENST00000476772 GAKO14976 1311 aa34.25■■■■□ 3.07
VEGFA-211ENST00000476772 BAG3O95817 575 aa34.25■■■■□ 3.07
VEGFA-211ENST00000476772 PPP4CP60510 307 aa34.25■■■■□ 3.07
VEGFA-211ENST00000476772 FKBP1AP62942 108 aaKnown RBP34.25■■■■□ 3.07
VEGFA-211ENST00000476772 FAM163AQ96GL9 167 aaPredicted RBP34.25■■■■□ 3.07
VEGFA-211ENST00000476772 TCEANC2Q96MN5 208 aa34.25■■■■□ 3.07
VEGFA-211ENST00000476772 VPS33BQ9H267 617 aa34.25■■■■□ 3.07
VEGFA-211ENST00000476772 TTF2Q9UNY4 1162 aaKnown RBP34.25■■■■□ 3.07
VEGFA-211ENST00000476772 BTDP43251 543 aa34.24■■■■□ 3.07
VEGFA-211ENST00000476772 TBC1D10CQ8IV04 446 aa34.24■■■■□ 3.07
VEGFA-211ENST00000476772 BAZ2AQ9UIF9 1905 aaKnown RBP34.23■■■■□ 3.07
VEGFA-211ENST00000476772 PSME4Q14997 1843 aa34.23■■■■□ 3.07
VEGFA-211ENST00000476772 GPR75-ASB3A0A0A6YYF3 556 aa34.23■■■■□ 3.07
VEGFA-211ENST00000476772 SH3RF3Q8TEJ3 882 aaPredicted RBP34.23■■■■□ 3.07
VEGFA-211ENST00000476772 TIAM2Q8IVF5 1701 aa34.23■■■■□ 3.07
VEGFA-211ENST00000476772 HMGB1P09429 215 aaKnown RBP34.22■■■■□ 3.07
VEGFA-211ENST00000476772 TMX3Q96JJ7 454 aa34.22■■■■□ 3.07
VEGFA-211ENST00000476772 TAOK3Q9H2K8 898 aa34.22■■■■□ 3.07
VEGFA-211ENST00000476772 IARSP41252 1262 aaKnown RBP34.22■■■■□ 3.07
VEGFA-211ENST00000476772 GIMAP6Q6P9H5 292 aa34.22■■■■□ 3.07
VEGFA-211ENST00000476772 ARFGEF1Q9Y6D6 1849 aa34.21■■■■□ 3.07
VEGFA-211ENST00000476772 NFKBIEO00221 500 aa34.21■■■■□ 3.07
VEGFA-211ENST00000476772 SLKQ9H2G2 1235 aaPredicted RBP34.21■■■■□ 3.07
VEGFA-211ENST00000476772 DAGLAQ9Y4D2 1042 aa34.21■■■■□ 3.07
VEGFA-211ENST00000476772 ADAMTSL1Q8N6G6 1762 aa34.2■■■■□ 3.07
VEGFA-211ENST00000476772 LARP6Q9BRS8 491 aaKnown RBP34.2■■■■□ 3.07
VEGFA-211ENST00000476772 DCP1AQ9NPI6 582 aaPredicted RBP34.2■■■■□ 3.07
VEGFA-211ENST00000476772 ATP8A2Q9NTI2 1148 aa34.2■■■■□ 3.07
VEGFA-211ENST00000476772 CTDSPL2Q05D32 466 aa34.19■■■■□ 3.06
VEGFA-211ENST00000476772 DHX32Q7L7V1 743 aaKnown RBP34.19■■■■□ 3.06
VEGFA-211ENST00000476772 CERS3Q8IU89 383 aa34.19■■■■□ 3.06
VEGFA-211ENST00000476772 ALDH8A1Q9H2A2 487 aaPredicted RBP34.19■■■■□ 3.06
VEGFA-211ENST00000476772 HSP90AA1P07900 732 aaKnown RBP34.19■■■■□ 3.06
VEGFA-211ENST00000476772 SCNN1DP51172 638 aa34.19■■■■□ 3.06
VEGFA-211ENST00000476772 FOXD4L1Q9NU39 408 aa34.19■■■■□ 3.06
VEGFA-211ENST00000476772 CDK5RAP2Q96SN8 1893 aa34.18■■■■□ 3.06
VEGFA-211ENST00000476772 PPARAQ07869 468 aa34.18■■■■□ 3.06
VEGFA-211ENST00000476772 KIAA0825Q8IV33 1275 aa34.18■■■■□ 3.06
VEGFA-211ENST00000476772 NCOA7Q8NI08 942 aa34.18■■■■□ 3.06
VEGFA-211ENST00000476772 FHDC1Q9C0D6 1143 aaPredicted RBP34.18■■■■□ 3.06
VEGFA-211ENST00000476772 LIMCH1Q9UPQ0 1083 aa34.18■■■■□ 3.06
VEGFA-211ENST00000476772 NIM1KQ8IY84 436 aa34.17■■■■□ 3.06
VEGFA-211ENST00000476772 MINDY4BA8MYZ0 360 aa34.16■■■■□ 3.06
VEGFA-211ENST00000476772 LAMB1P07942 1786 aa34.16■■■■□ 3.06
VEGFA-211ENST00000476772 USP5P45974 858 aa34.16■■■■□ 3.06
VEGFA-211ENST00000476772 EXOSC10Q01780 885 aaKnown RBP34.16■■■■□ 3.06
VEGFA-211ENST00000476772 TOB2Q14106 344 aaPredicted RBP34.16■■■■□ 3.06
VEGFA-211ENST00000476772 RALYLQ86SE5 291 aaKnown RBP34.16■■■■□ 3.06
VEGFA-211ENST00000476772 MB21D2Q8IYB1 491 aaPredicted RBP34.16■■■■□ 3.06
VEGFA-211ENST00000476772 NEDD4P46934 1319 aa34.16■■■■□ 3.06
VEGFA-211ENST00000476772 RHBDL3P58872 404 aa34.15■■■■□ 3.06
VEGFA-211ENST00000476772 CTR9Q6PD62 1173 aa34.15■■■■□ 3.06
VEGFA-211ENST00000476772 Q6ZUG5 572 aa34.15■■■■□ 3.06
VEGFA-211ENST00000476772 LRRC2Q9BYS8 371 aa34.15■■■■□ 3.06
VEGFA-211ENST00000476772 TACC3Q9Y6A5 838 aa34.15■■■■□ 3.06
VEGFA-211ENST00000476772 NAV1Q8NEY1 1877 aa34.15■■■■□ 3.06
VEGFA-211ENST00000476772 PLCG2P16885 1265 aa34.15■■■■□ 3.06
VEGFA-211ENST00000476772 TRDNQ13061 729 aa34.15■■■■□ 3.06
VEGFA-211ENST00000476772 ANKRD1Q15327 319 aa34.15■■■■□ 3.06
VEGFA-211ENST00000476772 TEKT1Q969V4 418 aa34.15■■■■□ 3.06
VEGFA-211ENST00000476772 ANAPC4Q9UJX5 808 aa34.15■■■■□ 3.06
VEGFA-211ENST00000476772 CYP2D7A0A087X1C5 515 aa34.14■■■■□ 3.06
VEGFA-211ENST00000476772 USP17L12C9JPN9 530 aa34.14■■■■□ 3.06
VEGFA-211ENST00000476772 USP17L21D6R901 530 aa34.14■■■■□ 3.06
VEGFA-211ENST00000476772 AKNAD1Q5T1N1 836 aa34.14■■■■□ 3.06
VEGFA-211ENST00000476772 HHIPL2Q6UWX4 724 aa34.14■■■■□ 3.06
VEGFA-211ENST00000476772 CHST3Q7LGC8 479 aa34.14■■■■□ 3.06
VEGFA-211ENST00000476772 TEX11Q8IYF3 940 aa34.14■■■■□ 3.06
VEGFA-211ENST00000476772 TGFBRAP1Q8WUH2 860 aa34.14■■■■□ 3.06
VEGFA-211ENST00000476772 INCENPQ9NQS7 918 aa34.14■■■■□ 3.06
VEGFA-211ENST00000476772 MKRN1Q9UHC7 482 aaKnown RBP34.14■■■■□ 3.06
VEGFA-211ENST00000476772 ZNRF3Q9ULT6 936 aa34.14■■■■□ 3.06
VEGFA-211ENST00000476772 SMIM22K7EJ46 135 aa34.13■■■■□ 3.05
VEGFA-211ENST00000476772 RAD17O75943 681 aa34.13■■■■□ 3.05
VEGFA-211ENST00000476772 STAG1Q8WVM7 1258 aa34.13■■■■□ 3.05
VEGFA-211ENST00000476772 LTBP3Q9NS15 1303 aa34.13■■■■□ 3.05
VEGFA-211ENST00000476772 CRKP46108 304 aa34.12■■■■□ 3.05
VEGFA-211ENST00000476772 CUL4AQ13619 759 aa34.12■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms