RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 PDS5AQ29RF7 1337 aaKnown RBP14.06□□□□□ -0.16
NUDCD3-206ENST00000475952 ATAD5Q96QE3 1844 aa14.06□□□□□ -0.16
NUDCD3-206ENST00000475952 COL6A3P12111 3177 aa14.06□□□□□ -0.16
NUDCD3-206ENST00000475952 MYH7P12883 1935 aa14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 TCP10L2B9ZVM9 353 aa14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 ZBTB7BO15156 539 aaPredicted RBP14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 LDHBP07195 334 aaKnown RBP14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 IREB2P48200 963 aaKnown RBP14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 TIMM10P62072 90 aa14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 ATP8B2P98198 1209 aa14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 POLA2Q14181 598 aa14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 MAP3K11Q16584 847 aa14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 GORABQ5T7V8 394 aa14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 NBPF12Q5TAG4 269 aaPredicted RBP14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 SSH3Q8TE77 659 aa14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 NEUROD6Q96NK8 337 aa14.05□□□□□ -0.16
NUDCD3-206ENST00000475952 UNCXA6NJT0 531 aa14.04□□□□□ -0.16
NUDCD3-206ENST00000475952 PRDX5P30044 214 aa14.04□□□□□ -0.16
NUDCD3-206ENST00000475952 SREBF2Q12772 1141 aa14.04□□□□□ -0.16
NUDCD3-206ENST00000475952 RASGRF1Q13972 1273 aa14.04□□□□□ -0.16
NUDCD3-206ENST00000475952 PANK1Q8TE04 598 aa14.04□□□□□ -0.16
NUDCD3-206ENST00000475952 RCAN3Q9UKA8 241 aa14.04□□□□□ -0.16
NUDCD3-206ENST00000475952 FZD1Q9UP38 647 aa14.04□□□□□ -0.16
NUDCD3-206ENST00000475952 RPAP1Q9BWH6 1393 aaPredicted RBP14.04□□□□□ -0.16
NUDCD3-206ENST00000475952 DOCK1Q14185 1865 aa14.04□□□□□ -0.16
NUDCD3-206ENST00000475952 DIXDC1Q155Q3 683 aa14.03□□□□□ -0.16
NUDCD3-206ENST00000475952 LDLRAD1Q5T700 205 aa14.03□□□□□ -0.16
NUDCD3-206ENST00000475952 FKBP1CQ5VVH2 108 aa14.03□□□□□ -0.16
NUDCD3-206ENST00000475952 FAM83AQ86UY5 434 aa14.03□□□□□ -0.16
NUDCD3-206ENST00000475952 TMEM39BQ9GZU3 492 aa14.03□□□□□ -0.16
NUDCD3-206ENST00000475952 DDX19BQ9UMR2 479 aa14.03□□□□□ -0.16
NUDCD3-206ENST00000475952 PTPRFP10586 1907 aa14.03□□□□□ -0.16
NUDCD3-206ENST00000475952 MYH1P12882 1939 aa14.02□□□□□ -0.16
NUDCD3-206ENST00000475952 SURF6O75683 361 aaKnown RBP14.02□□□□□ -0.17
NUDCD3-206ENST00000475952 CACNB3P54284 484 aa14.02□□□□□ -0.17
NUDCD3-206ENST00000475952 SPTY2D1Q68D10 685 aaPredicted RBP14.02□□□□□ -0.17
NUDCD3-206ENST00000475952 APOBEC3HQ6NTF7 200 aaKnown RBP14.02□□□□□ -0.17
NUDCD3-206ENST00000475952 DZIP1Q86YF9 867 aaKnown RBP14.02□□□□□ -0.17
NUDCD3-206ENST00000475952 SLF2Q8IX21 1173 aa14.02□□□□□ -0.17
NUDCD3-206ENST00000475952 ANKRD13AQ8IZ07 590 aa14.02□□□□□ -0.17
NUDCD3-206ENST00000475952 HOOK2Q96ED9 719 aa14.02□□□□□ -0.17
NUDCD3-206ENST00000475952 TEPSINQ96N21 525 aa14.02□□□□□ -0.17
NUDCD3-206ENST00000475952 GPR108Q9NPR9 543 aa14.02□□□□□ -0.17
NUDCD3-206ENST00000475952 ABCF2Q9UG63 623 aa14.02□□□□□ -0.17
NUDCD3-206ENST00000475952 DAGLAQ9Y4D2 1042 aa14.02□□□□□ -0.17
NUDCD3-206ENST00000475952 ZBTB48P10074 688 aaPredicted RBP14.01□□□□□ -0.17
NUDCD3-206ENST00000475952 ARID4AP29374 1257 aaPredicted RBP14.01□□□□□ -0.17
NUDCD3-206ENST00000475952 TNNI3KQ59H18 835 aa14.01□□□□□ -0.17
NUDCD3-206ENST00000475952 CEP85Q6P2H3 762 aa14.01□□□□□ -0.17
NUDCD3-206ENST00000475952 OTOP1Q7RTM1 612 aa14.01□□□□□ -0.17
NUDCD3-206ENST00000475952 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.01□□□□□ -0.17
NUDCD3-206ENST00000475952 SLC10A4Q96EP9 437 aa14.01□□□□□ -0.17
NUDCD3-206ENST00000475952 CHMP4BQ9H444 224 aaKnown RBP14.01□□□□□ -0.17
NUDCD3-206ENST00000475952 TRIM17Q9Y577 477 aa14.01□□□□□ -0.17
NUDCD3-206ENST00000475952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.01□□□□□ -0.17
NUDCD3-206ENST00000475952 FPGT-TNNI3KV9GXZ4 949 aa14.01□□□□□ -0.17
NUDCD3-206ENST00000475952 MYH8P13535 1937 aa14□□□□□ -0.17
NUDCD3-206ENST00000475952 USP2O75604 605 aaPredicted RBP14□□□□□ -0.17
NUDCD3-206ENST00000475952 UQCRFS1P1P0C7P4 283 aa14□□□□□ -0.17
NUDCD3-206ENST00000475952 CCDC158Q5M9N0 1113 aa14□□□□□ -0.17
NUDCD3-206ENST00000475952 SPRYD7Q5W111 196 aa14□□□□□ -0.17
NUDCD3-206ENST00000475952 ERICH6Q7L0X2 663 aa14□□□□□ -0.17
NUDCD3-206ENST00000475952 CDAN1Q8IWY9 1227 aa14□□□□□ -0.17
NUDCD3-206ENST00000475952 SPATA5Q8NB90 893 aa14□□□□□ -0.17
NUDCD3-206ENST00000475952 ZBTB4Q9P1Z0 1013 aaPredicted RBP14□□□□□ -0.17
NUDCD3-206ENST00000475952 NOP58Q9Y2X3 529 aaKnown RBP14□□□□□ -0.17
NUDCD3-206ENST00000475952 PHIPQ8WWQ0 1821 aa13.99□□□□□ -0.17
NUDCD3-206ENST00000475952 CUL9Q8IWT3 2517 aa13.99□□□□□ -0.17
NUDCD3-206ENST00000475952 GAKO14976 1311 aa13.99□□□□□ -0.17
NUDCD3-206ENST00000475952 MANSC4A6NHS7 340 aaPredicted RBP13.99□□□□□ -0.17
NUDCD3-206ENST00000475952 TTC39AQ5SRH9 613 aa13.99□□□□□ -0.17
NUDCD3-206ENST00000475952 DCAF15Q66K64 600 aa13.99□□□□□ -0.17
NUDCD3-206ENST00000475952 ERC1Q8IUD2 1116 aa13.99□□□□□ -0.17
NUDCD3-206ENST00000475952 WNK4Q96J92 1243 aa13.99□□□□□ -0.17
NUDCD3-206ENST00000475952 CLMNQ96JQ2 1002 aa13.99□□□□□ -0.17
NUDCD3-206ENST00000475952 HMG20BQ9P0W2 317 aa13.99□□□□□ -0.17
NUDCD3-206ENST00000475952 COG6Q9Y2V7 657 aa13.99□□□□□ -0.17
NUDCD3-206ENST00000475952 MROH7-TTC4A0A0A0MT08 1334 aa13.98□□□□□ -0.17
NUDCD3-206ENST00000475952 LAMA3Q16787 3333 aa13.98□□□□□ -0.17
NUDCD3-206ENST00000475952 ALDH1A1P00352 501 aa13.98□□□□□ -0.17
NUDCD3-206ENST00000475952 EN2P19622 333 aaPredicted RBP13.98□□□□□ -0.17
NUDCD3-206ENST00000475952 MCAMP43121 646 aa13.98□□□□□ -0.17
NUDCD3-206ENST00000475952 CDC42EP5Q6NZY7 148 aa13.98□□□□□ -0.17
NUDCD3-206ENST00000475952 FAM151AQ8WW52 585 aa13.98□□□□□ -0.17
NUDCD3-206ENST00000475952 USP40Q9NVE5 1235 aa13.98□□□□□ -0.17
NUDCD3-206ENST00000475952 CSADQ9Y600 493 aa13.98□□□□□ -0.17
NUDCD3-206ENST00000475952 NAV1Q8NEY1 1877 aa13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 SIPA1L1O43166 1804 aa13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 HMMRO75330 724 aa13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 INHBEP58166 350 aa13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 GSTO1P78417 241 aa13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 MAP3K9P80192 1104 aa13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 MECOMQ03112 1051 aa13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 TCP10Q12799 353 aa13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 HSP90AB4PQ58FF6 505 aa13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 IFNL1Q8IU54 200 aa13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 ARMC5Q96C12 935 aa13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 DBNDD2Q9BQY9 259 aa13.97□□□□□ -0.17
NUDCD3-206ENST00000475952 ELP3Q9H9T3 547 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms