RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CABP4P57796 275 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 APOBRQ0VD83 1088 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 MSL1Q68DK7 614 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 CCDC174Q6PII3 467 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 NUTM1Q86Y26 1132 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 MIPOL1Q8TD10 442 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 AOX1Q06278 1338 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 ADGRB3O60242 1522 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 N4BP1O75113 896 aaKnown RBP12.99□□□□□ -0.33
U2AF1-209ENST00000475639 POLR3DP05423 398 aaPredicted RBP12.99□□□□□ -0.33
U2AF1-209ENST00000475639 WDR78Q5VTH9 848 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 SMC1BQ8NDV3 1235 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 NAPBQ9H115 298 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 AKAP2Q9Y2D5 859 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 LRRC31Q6UY01 552 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 ZSWIM4Q9H7M6 989 aa12.99□□□□□ -0.33
U2AF1-209ENST00000475639 OPA1O60313 960 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 PI4K2BQ8TCG2 481 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 CALML4Q96GE6 196 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 EHMT1Q9H9B1 1298 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 MINDY4BA8MYZ0 360 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 HMGB1P09429 215 aaKnown RBP12.98□□□□□ -0.33
U2AF1-209ENST00000475639 PLEKHA4Q9H4M7 779 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 PUF60Q9UHX1 559 aaKnown RBP12.98□□□□□ -0.33
U2AF1-209ENST00000475639 PTH1RQ03431 593 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 ZNF530Q6P9A1 599 aaPredicted RBP12.98□□□□□ -0.33
U2AF1-209ENST00000475639 OTUD6BQ8N6M0 293 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 PAIP2Q9BPZ3 127 aaKnown RBP12.98□□□□□ -0.33
U2AF1-209ENST00000475639 ABCC1P33527 1531 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 PPLO60437 1756 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 MAP2K2P36507 400 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 PRPHP41219 470 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 PRPF40BQ6NWY9 871 aaKnown RBP12.98□□□□□ -0.33
U2AF1-209ENST00000475639 STRN4Q9NRL3 753 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 IFNKQ9P0W0 207 aa12.98□□□□□ -0.33
U2AF1-209ENST00000475639 ABCC3O15438 1527 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 MCM6Q14566 821 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 G2E3Q7L622 706 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 EFCAB13Q8IY85 973 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 GOLPH3LQ9H4A5 285 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 MED4Q9NPJ6 270 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 FAN1Q9Y2M0 1017 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 ZFYVE16Q7Z3T8 1539 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 CCDC151A5D8V7 595 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 PPP2R3AQ06190 1150 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 CCDC121Q6ZUS5 278 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 USP37Q86T82 979 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 TADA2BQ86TJ2 420 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 FSIP1Q8NA03 581 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 N4BP3O15049 544 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 GMNNO75496 209 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 IFIT1P09914 478 aaKnown RBP12.97□□□□□ -0.33
U2AF1-209ENST00000475639 CYLC1P35663 651 aaPredicted RBP12.97□□□□□ -0.33
U2AF1-209ENST00000475639 MRPS9P82933 396 aaKnown RBP12.97□□□□□ -0.33
U2AF1-209ENST00000475639 KANK3Q6NY19 840 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
U2AF1-209ENST00000475639 RABGGTAQ92696 567 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 TM6SF1Q9BZW5 370 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
U2AF1-209ENST00000475639 CTAGE15A4D2H0 777 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 KIF1CO43896 1103 aaKnown RBP12.97□□□□□ -0.33
U2AF1-209ENST00000475639 CTAGE8P0CG41 777 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 CTAGE6Q86UF2 777 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 CTAGE4Q8IX94 777 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 AFAP1Q8N556 730 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 SELENOOQ9BVL4 669 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 LRRC27Q9C0I9 530 aa12.97□□□□□ -0.33
U2AF1-209ENST00000475639 SYCP3Q8IZU3 236 aa12.96□□□□□ -0.33
U2AF1-209ENST00000475639 LUC7L2Q9Y383 392 aaKnown RBP12.96□□□□□ -0.33
U2AF1-209ENST00000475639 MRFAP1Q9Y605 127 aa12.96□□□□□ -0.33
U2AF1-209ENST00000475639 RAB11FIP3O75154 756 aa12.96□□□□□ -0.33
U2AF1-209ENST00000475639 ATP6V1AP38606 617 aa12.96□□□□□ -0.33
U2AF1-209ENST00000475639 CCDC14Q49A88 953 aa12.96□□□□□ -0.33
U2AF1-209ENST00000475639 KAT2BQ92831 832 aa12.96□□□□□ -0.33
U2AF1-209ENST00000475639 WDR24Q96S15 920 aa12.96□□□□□ -0.33
U2AF1-209ENST00000475639 MRC2Q9UBG0 1479 aa12.96□□□□□ -0.33
U2AF1-209ENST00000475639 GIGYF1O75420 1035 aaPredicted RBP12.96□□□□□ -0.34
U2AF1-209ENST00000475639 IL13P35225 146 aa12.96□□□□□ -0.34
U2AF1-209ENST00000475639 NLRP5P59047 1200 aa12.96□□□□□ -0.34
U2AF1-209ENST00000475639 ATP8B2P98198 1209 aa12.96□□□□□ -0.34
U2AF1-209ENST00000475639 FAM212AQ96EL1 285 aa12.96□□□□□ -0.34
U2AF1-209ENST00000475639 CWC25Q9NXE8 425 aaPredicted RBP12.96□□□□□ -0.34
U2AF1-209ENST00000475639 RASAL2Q9UJF2 1139 aa12.96□□□□□ -0.34
U2AF1-209ENST00000475639 VWA3AA6NCI4 1184 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 CCDC82Q8N4S0 544 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 ZCCHC11Q5TAX3 1644 aaKnown RBP12.95□□□□□ -0.34
U2AF1-209ENST00000475639 A0A1B0GUA9 196 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 SPAG1Q07617 926 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 SULT6B1Q6IMI4 303 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 TTC16Q8NEE8 873 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 TXNDC16Q9P2K2 825 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 SATB1Q01826 763 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 BEND6Q5SZJ8 279 aaPredicted RBP12.95□□□□□ -0.34
U2AF1-209ENST00000475639 CCDC102BQ68D86 513 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 MICALL1Q8N3F8 863 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 CCDC63Q8NA47 563 aa12.95□□□□□ -0.34
U2AF1-209ENST00000475639 CPSF2Q9P2I0 782 aaKnown RBP12.95□□□□□ -0.34
U2AF1-209ENST00000475639 CHD2O14647 1828 aaKnown RBP12.95□□□□□ -0.34
U2AF1-209ENST00000475639 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
U2AF1-209ENST00000475639 A0A087WZG4 1122 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms