RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 WDR66Q8TBY9 1149 aa8.76□□□□□ -1.01
HDAC3-207ENST00000475549 FAM198AQ9UFP1 575 aa8.76□□□□□ -1.01
HDAC3-207ENST00000475549 DAGLAQ9Y4D2 1042 aa8.76□□□□□ -1.01
HDAC3-207ENST00000475549 SNCAIPQ9Y6H5 919 aa8.76□□□□□ -1.01
HDAC3-207ENST00000475549 BRCA2P51587 3418 aa8.76□□□□□ -1.01
HDAC3-207ENST00000475549 MKI67P46013 3256 aaKnown RBP8.76□□□□□ -1.01
HDAC3-207ENST00000475549 SPDYE5A6NIY4 337 aa8.75□□□□□ -1.01
HDAC3-207ENST00000475549 SLURP2P0DP57 97 aa8.75□□□□□ -1.01
HDAC3-207ENST00000475549 TCP10Q12799 353 aa8.75□□□□□ -1.01
HDAC3-207ENST00000475549 TFCP2Q12800 502 aa8.75□□□□□ -1.01
HDAC3-207ENST00000475549 MTX1Q13505 466 aa8.75□□□□□ -1.01
HDAC3-207ENST00000475549 CCDC102BQ68D86 513 aa8.75□□□□□ -1.01
HDAC3-207ENST00000475549 OTOP1Q7RTM1 612 aa8.75□□□□□ -1.01
HDAC3-207ENST00000475549 ZNF384Q8TF68 577 aa8.75□□□□□ -1.01
HDAC3-207ENST00000475549 OTUD5Q96G74 571 aa8.75□□□□□ -1.01
HDAC3-207ENST00000475549 SALL1Q9NSC2 1324 aa8.75□□□□□ -1.01
HDAC3-207ENST00000475549 CCL15-CCL14A0A0B4J2E2 113 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 IRF6O14896 467 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 SRGAP3O43295 1099 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 INPP5BP32019 993 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 GTF2A2P52657 109 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 RASGRF1Q13972 1273 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 CCL15Q16663 113 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 ATF7IPQ6VMQ6 1270 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 CD99L2Q8TCZ2 262 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 FAM151AQ8WW52 585 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 CLUAP1Q96AJ1 413 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 XAGE2Q96GT9 111 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 WRNIP1Q96S55 665 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 USP40Q9NVE5 1235 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 ZNF112Q9UJU3 913 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 TRIM17Q9Y577 477 aa8.74□□□□□ -1.01
HDAC3-207ENST00000475549 PNMA6EA0A0J9YXQ4 647 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 A0A1B0GUL7 405 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 BTBD19C9JJ37 291 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 SEMA3EO15041 775 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 LDHBP07195 334 aaKnown RBP8.73□□□□□ -1.01
HDAC3-207ENST00000475549 SP3Q02447 781 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 MOGSQ13724 837 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 OTUD7BQ6GQQ9 843 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 PI16Q6UXB8 463 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 SH3BP5LQ7L8J4 393 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 ERO1BQ86YB8 467 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 MIER1Q8N108 512 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 FRAT1Q92837 279 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-207ENST00000475549 GNL3LQ9NVN8 582 aaKnown RBP8.73□□□□□ -1.01
HDAC3-207ENST00000475549 DENND2AQ9ULE3 1009 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 PTPN22Q9Y2R2 807 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 CSADQ9Y600 493 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 MAST3O60307 1309 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 ATRNL1Q5VV63 1379 aa8.73□□□□□ -1.01
HDAC3-207ENST00000475549 PHF20L1A8MW92 1017 aa8.72□□□□□ -1.01
HDAC3-207ENST00000475549 GNAI3P08754 354 aa8.72□□□□□ -1.01
HDAC3-207ENST00000475549 CTGFP29279 349 aa8.72□□□□□ -1.01
HDAC3-207ENST00000475549 MAP3K10Q02779 954 aa8.72□□□□□ -1.01
HDAC3-207ENST00000475549 PPATQ06203 517 aa8.72□□□□□ -1.01
HDAC3-207ENST00000475549 TBC1D9Q6ZT07 1266 aa8.72□□□□□ -1.01
HDAC3-207ENST00000475549 FAM163AQ96GL9 167 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-207ENST00000475549 IDI2Q9BXS1 227 aa8.72□□□□□ -1.01
HDAC3-207ENST00000475549 ARHGAP39Q9C0H5 1083 aa8.72□□□□□ -1.01
HDAC3-207ENST00000475549 DDX4Q9NQI0 724 aaKnown RBP8.72□□□□□ -1.01
HDAC3-207ENST00000475549 TMOD2Q9NZR1 351 aa8.72□□□□□ -1.01
HDAC3-207ENST00000475549 HDAC5Q9UQL6 1122 aa8.72□□□□□ -1.01
HDAC3-207ENST00000475549 GAKO14976 1311 aa8.72□□□□□ -1.01
HDAC3-207ENST00000475549 RPAP1Q9BWH6 1393 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-207ENST00000475549 POTEFA5A3E0 1075 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 DDTLA6NHG4 134 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-207ENST00000475549 IPO8O15397 1037 aaKnown RBP8.71□□□□□ -1.02
HDAC3-207ENST00000475549 TLR2O60603 784 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 WDHD1O75717 1129 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-207ENST00000475549 GNAI2P04899 355 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 CETPP11597 493 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 RGS3P49796 1198 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 RHBDL3P58872 404 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 PPIL2Q13356 520 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 SNAPC2Q13487 334 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 TAF1CQ15572 869 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-207ENST00000475549 TMEM57Q8N5G2 664 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-207ENST00000475549 ERO1AQ96HE7 468 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 ZNF341Q9BYN7 854 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 EFCC1Q9HA90 598 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 ZFYVE28Q9HCC9 887 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 HMG20BQ9P0W2 317 aa8.71□□□□□ -1.02
HDAC3-207ENST00000475549 PDS5AQ29RF7 1337 aaKnown RBP8.71□□□□□ -1.02
HDAC3-207ENST00000475549 GPR75-ASB3A0A0A6YYF3 556 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 ENTPD3O75355 529 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 RLBP1P12271 317 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 MECOMQ03112 1051 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 POLA2Q14181 598 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 DCAF15Q66K64 600 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 GPAT2Q6NUI2 795 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 C17orf99Q6UX52 265 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 SPATA5Q8NB90 893 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 ARMC5Q96C12 935 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 NEUROD6Q96NK8 337 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-207ENST00000475549 ABCF2Q9UG63 623 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 KCNH4Q9UQ05 1017 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 AKAP2Q9Y2D5 859 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms