RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 SGSM2O43147 1006 aa18.21■□□□□ 0.51
MCF2L-224ENST00000475524 EPB41L2O43491 1005 aaKnown RBP18.21■□□□□ 0.51
MCF2L-224ENST00000475524 MYO1BO43795 1136 aa18.21■□□□□ 0.51
MCF2L-224ENST00000475524 NPM3O75607 178 aaKnown RBP18.21■□□□□ 0.51
MCF2L-224ENST00000475524 KIF4BQ2VIQ3 1234 aa18.21■□□□□ 0.51
MCF2L-224ENST00000475524 FKBP1CQ5VVH2 108 aa18.21■□□□□ 0.51
MCF2L-224ENST00000475524 CWC27Q6UX04 472 aaKnown RBP18.21■□□□□ 0.51
MCF2L-224ENST00000475524 FAM227BQ96M60 508 aa18.21■□□□□ 0.51
MCF2L-224ENST00000475524 ESYT1Q9BSJ8 1104 aa18.21■□□□□ 0.51
MCF2L-224ENST00000475524 PUS7LQ9H0K6 701 aaKnown RBP18.21■□□□□ 0.51
MCF2L-224ENST00000475524 CCDC171Q6TFL3 1326 aa18.21■□□□□ 0.51
MCF2L-224ENST00000475524 GPAA1O43292 621 aa18.2■□□□□ 0.5
MCF2L-224ENST00000475524 RBM5P52756 815 aaKnown RBP eCLIP18.2■□□□□ 0.5
MCF2L-224ENST00000475524 USP50Q70EL3 339 aaPredicted RBP18.2■□□□□ 0.5
MCF2L-224ENST00000475524 STRBPQ96SI9 672 aaKnown RBP18.2■□□□□ 0.5
MCF2L-224ENST00000475524 DDX60LQ5H9U9 1706 aaKnown RBP18.2■□□□□ 0.5
MCF2L-224ENST00000475524 M0R2C6 588 aa18.19■□□□□ 0.5
MCF2L-224ENST00000475524 WNT10BO00744 389 aa18.19■□□□□ 0.5
MCF2L-224ENST00000475524 MBD4O95243 580 aa18.19■□□□□ 0.5
MCF2L-224ENST00000475524 CHGBP05060 677 aa18.19■□□□□ 0.5
MCF2L-224ENST00000475524 EPS15P42566 896 aa18.19■□□□□ 0.5
MCF2L-224ENST00000475524 RHBDL3P58872 404 aa18.19■□□□□ 0.5
MCF2L-224ENST00000475524 GIMAP6Q6P9H5 292 aa18.19■□□□□ 0.5
MCF2L-224ENST00000475524 PNMA8AQ86V59 439 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-224ENST00000475524 NAV1Q8NEY1 1877 aa18.19■□□□□ 0.5
MCF2L-224ENST00000475524 PRMT6Q96LA8 375 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-224ENST00000475524 CRNKL1Q9BZJ0 848 aaKnown RBP18.19■□□□□ 0.5
MCF2L-224ENST00000475524 AATFQ9NY61 560 aaKnown RBP eCLIP18.19■□□□□ 0.5
MCF2L-224ENST00000475524 COL2A1P02458 1487 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-224ENST00000475524 PITPNM2Q9BZ72 1349 aa18.19■□□□□ 0.5
MCF2L-224ENST00000475524 VEGFAP15692 232 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-224ENST00000475524 EPHX2P34913 555 aa18.18■□□□□ 0.5
MCF2L-224ENST00000475524 SPDYE2Q495Y8 402 aa18.18■□□□□ 0.5
MCF2L-224ENST00000475524 CDC42EP5Q6NZY7 148 aa18.18■□□□□ 0.5
MCF2L-224ENST00000475524 MIGA1Q8NAN2 632 aa18.18■□□□□ 0.5
MCF2L-224ENST00000475524 ZC3H15Q8WU90 426 aaKnown RBP18.18■□□□□ 0.5
MCF2L-224ENST00000475524 SEC62Q99442 399 aaKnown RBP18.18■□□□□ 0.5
MCF2L-224ENST00000475524 IDI2Q9BXS1 227 aa18.18■□□□□ 0.5
MCF2L-224ENST00000475524 ATP8A2Q9NTI2 1148 aa18.18■□□□□ 0.5
MCF2L-224ENST00000475524 TMOD2Q9NZR1 351 aa18.18■□□□□ 0.5
MCF2L-224ENST00000475524 ZMYM6O95789 1325 aa18.18■□□□□ 0.5
MCF2L-224ENST00000475524 SHTN1A0MZ66 631 aa18.17■□□□□ 0.5
MCF2L-224ENST00000475524 POTECB2RU33 542 aa18.17■□□□□ 0.5
MCF2L-224ENST00000475524 REC8O95072 547 aa18.17■□□□□ 0.5
MCF2L-224ENST00000475524 SLFNL1Q499Z3 407 aa18.17■□□□□ 0.5
MCF2L-224ENST00000475524 C8orf34Q49A92 452 aa18.17■□□□□ 0.5
MCF2L-224ENST00000475524 SAMD7Q7Z3H4 446 aa18.17■□□□□ 0.5
MCF2L-224ENST00000475524 LCORLQ8N3X6 602 aa18.17■□□□□ 0.5
MCF2L-224ENST00000475524 DSCC1Q9BVC3 393 aa18.17■□□□□ 0.5
MCF2L-224ENST00000475524 TAF1DQ9H5J8 278 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-224ENST00000475524 USP40Q9NVE5 1235 aa18.17■□□□□ 0.5
MCF2L-224ENST00000475524 DYNLL1P63167 89 aaKnown RBP18.16■□□□□ 0.5
MCF2L-224ENST00000475524 TNFAIP1Q13829 316 aa18.16■□□□□ 0.5
MCF2L-224ENST00000475524 ALX1Q15699 326 aa18.16■□□□□ 0.5
MCF2L-224ENST00000475524 ZNF589Q86UQ0 364 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-224ENST00000475524 ARMT1Q9H993 441 aa18.16■□□□□ 0.5
MCF2L-224ENST00000475524 TAOK2Q9UL54 1235 aa18.16■□□□□ 0.5
MCF2L-224ENST00000475524 LAMB1P07942 1786 aa18.16■□□□□ 0.5
MCF2L-224ENST00000475524 LAMA4Q16363 1823 aa18.16■□□□□ 0.5
MCF2L-224ENST00000475524 MYH1P12882 1939 aa18.15■□□□□ 0.5
MCF2L-224ENST00000475524 PATL2C9JE40 543 aaKnown RBP18.15■□□□□ 0.5
MCF2L-224ENST00000475524 ENTPD3O75355 529 aa18.15■□□□□ 0.5
MCF2L-224ENST00000475524 TBC1D10BQ4KMP7 808 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-224ENST00000475524 KIAA1211Q6ZU35 1233 aa18.15■□□□□ 0.5
MCF2L-224ENST00000475524 FAM83AQ86UY5 434 aa18.15■□□□□ 0.5
MCF2L-224ENST00000475524 TEX11Q8IYF3 940 aa18.15■□□□□ 0.5
MCF2L-224ENST00000475524 TRPM4Q8TD43 1214 aa18.15■□□□□ 0.5
MCF2L-224ENST00000475524 SH3RF3Q8TEJ3 882 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-224ENST00000475524 DDRGK1Q96HY6 314 aa18.15■□□□□ 0.5
MCF2L-224ENST00000475524 TDRD3Q9H7E2 651 aaKnown RBP18.15■□□□□ 0.5
MCF2L-224ENST00000475524 ZNF70Q9UC06 446 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-224ENST00000475524 PGAP2Q9UHJ9 254 aa18.15■□□□□ 0.5
MCF2L-224ENST00000475524 WDHD1O75717 1129 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-224ENST00000475524 EGFRP00533 1210 aa18.14■□□□□ 0.49
MCF2L-224ENST00000475524 NBPF9Q3BBW0 867 aa18.14■□□□□ 0.49
MCF2L-224ENST00000475524 APOBEC3FQ8IUX4 373 aaKnown RBP18.14■□□□□ 0.49
MCF2L-224ENST00000475524 NACAP1Q9BZK3 213 aa18.14■□□□□ 0.49
MCF2L-224ENST00000475524 IL25Q9H293 177 aa18.14■□□□□ 0.49
MCF2L-224ENST00000475524 MKRN1Q9UHC7 482 aaKnown RBP18.14■□□□□ 0.49
MCF2L-224ENST00000475524 PCDHAC2Q9Y5I4 1007 aa18.14■□□□□ 0.49
MCF2L-224ENST00000475524 SLC4A4Q9Y6R1 1079 aa18.14■□□□□ 0.49
MCF2L-224ENST00000475524 GSG1L2A8MUP6 293 aa18.13■□□□□ 0.49
MCF2L-224ENST00000475524 HSPD1P10809 573 aaKnown RBP18.13■□□□□ 0.49
MCF2L-224ENST00000475524 TNNI2P48788 182 aa18.13■□□□□ 0.49
MCF2L-224ENST00000475524 HIRAP54198 1017 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-224ENST00000475524 CCDC129Q6ZRS4 1044 aa18.13■□□□□ 0.49
MCF2L-224ENST00000475524 PPP2R3BQ9Y5P8 575 aa18.13■□□□□ 0.49
MCF2L-224ENST00000475524 ATRNL1Q5VV63 1379 aa18.13■□□□□ 0.49
MCF2L-224ENST00000475524 BAZ2AQ9UIF9 1905 aaKnown RBP18.13■□□□□ 0.49
MCF2L-224ENST00000475524 USP5P45974 858 aa18.12■□□□□ 0.49
MCF2L-224ENST00000475524 RBM26Q5T8P6 1007 aaKnown RBP18.12■□□□□ 0.49
MCF2L-224ENST00000475524 MAP4K1Q92918 833 aa18.12■□□□□ 0.49
MCF2L-224ENST00000475524 LSG1Q9H089 658 aaKnown RBP18.12■□□□□ 0.49
MCF2L-224ENST00000475524 DCP1AQ9NPI6 582 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-224ENST00000475524 CTNNA3Q9UI47 895 aa18.12■□□□□ 0.49
MCF2L-224ENST00000475524 FLT1P17948 1338 aa18.12■□□□□ 0.49
MCF2L-224ENST00000475524 FOXP2O15409 715 aa18.11■□□□□ 0.49
MCF2L-224ENST00000475524 SBK1Q52WX2 424 aa18.11■□□□□ 0.49
MCF2L-224ENST00000475524 TGFBRAP1Q8WUH2 860 aa18.11■□□□□ 0.49
MCF2L-224ENST00000475524 FAM151AQ8WW52 585 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms