RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 PCDHB15Q9Y5E8 787 aa19.2■□□□□ 0.66
CPSF3-203ENST00000475482 IREB2P48200 963 aaKnown RBP19.19■□□□□ 0.66
CPSF3-203ENST00000475482 G3BP1Q13283 466 aaKnown RBP eCLIP19.19■□□□□ 0.66
CPSF3-203ENST00000475482 RPAP2Q8IXW5 612 aaPredicted RBP19.19■□□□□ 0.66
CPSF3-203ENST00000475482 SLC10A4Q96EP9 437 aa19.19■□□□□ 0.66
CPSF3-203ENST00000475482 NOP58Q9Y2X3 529 aaKnown RBP19.19■□□□□ 0.66
CPSF3-203ENST00000475482 RPAP1Q9BWH6 1393 aaPredicted RBP19.19■□□□□ 0.66
CPSF3-203ENST00000475482 LDHBP07195 334 aaKnown RBP19.18■□□□□ 0.66
CPSF3-203ENST00000475482 ZBTB48P10074 688 aaPredicted RBP19.18■□□□□ 0.66
CPSF3-203ENST00000475482 CACNB3P54284 484 aa19.18■□□□□ 0.66
CPSF3-203ENST00000475482 DIXDC1Q155Q3 683 aa19.18■□□□□ 0.66
CPSF3-203ENST00000475482 ANKRD13AQ8IZ07 590 aa19.18■□□□□ 0.66
CPSF3-203ENST00000475482 ZGPATQ8N5A5 531 aaKnown RBP19.18■□□□□ 0.66
CPSF3-203ENST00000475482 CFHR5Q9BXR6 569 aa19.18■□□□□ 0.66
CPSF3-203ENST00000475482 GPR108Q9NPR9 543 aa19.18■□□□□ 0.66
CPSF3-203ENST00000475482 WNK4Q96J92 1243 aa19.17■□□□□ 0.66
CPSF3-203ENST00000475482 C1orf115Q9H7X2 142 aa19.17■□□□□ 0.66
CPSF3-203ENST00000475482 GAKO14976 1311 aa19.17■□□□□ 0.66
CPSF3-203ENST00000475482 ARID4AP29374 1257 aaPredicted RBP19.16■□□□□ 0.66
CPSF3-203ENST00000475482 INHBEP58166 350 aa19.16■□□□□ 0.66
CPSF3-203ENST00000475482 SREBF2Q12772 1141 aa19.16■□□□□ 0.66
CPSF3-203ENST00000475482 NOM1Q5C9Z4 860 aaKnown RBP19.16■□□□□ 0.66
CPSF3-203ENST00000475482 CDC42EP5Q6NZY7 148 aa19.16■□□□□ 0.66
CPSF3-203ENST00000475482 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.16■□□□□ 0.66
CPSF3-203ENST00000475482 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.16■□□□□ 0.66
CPSF3-203ENST00000475482 FAM163AQ96GL9 167 aaPredicted RBP19.16■□□□□ 0.66
CPSF3-203ENST00000475482 TMOD2Q9NZR1 351 aa19.16■□□□□ 0.66
CPSF3-203ENST00000475482 HMMRO75330 724 aa19.15■□□□□ 0.66
CPSF3-203ENST00000475482 GJA5P36382 358 aa19.15■□□□□ 0.66
CPSF3-203ENST00000475482 MKRN3Q13064 507 aaKnown RBP19.15■□□□□ 0.66
CPSF3-203ENST00000475482 ABHD8Q96I13 439 aa19.15■□□□□ 0.66
CPSF3-203ENST00000475482 NEUROD6Q96NK8 337 aa19.15■□□□□ 0.66
CPSF3-203ENST00000475482 HMG20BQ9P0W2 317 aa19.15■□□□□ 0.66
CPSF3-203ENST00000475482 MANSC4A6NHS7 340 aaPredicted RBP19.14■□□□□ 0.65
CPSF3-203ENST00000475482 IGHDP01880 384 aa19.14■□□□□ 0.65
CPSF3-203ENST00000475482 MAP3K9P80192 1104 aa19.14■□□□□ 0.65
CPSF3-203ENST00000475482 CEP85Q6P2H3 762 aa19.14■□□□□ 0.65
CPSF3-203ENST00000475482 FAM151AQ8WW52 585 aa19.14■□□□□ 0.65
CPSF3-203ENST00000475482 TESPA1A2RU30 521 aaPredicted RBP19.13■□□□□ 0.65
CPSF3-203ENST00000475482 SURF6O75683 361 aaKnown RBP19.13■□□□□ 0.65
CPSF3-203ENST00000475482 CAPN15O75808 1086 aa19.13■□□□□ 0.65
CPSF3-203ENST00000475482 TNNI3KQ59H18 835 aa19.13■□□□□ 0.65
CPSF3-203ENST00000475482 SPTY2D1Q68D10 685 aaPredicted RBP19.13■□□□□ 0.65
CPSF3-203ENST00000475482 ZNF384Q8TF68 577 aa19.13■□□□□ 0.65
CPSF3-203ENST00000475482 GCC1Q96CN9 775 aa19.13■□□□□ 0.65
CPSF3-203ENST00000475482 FPGT-TNNI3KV9GXZ4 949 aa19.13■□□□□ 0.65
CPSF3-203ENST00000475482 RFX7Q2KHR2 1363 aa19.13■□□□□ 0.65
CPSF3-203ENST00000475482 MCAMP43121 646 aa19.12■□□□□ 0.65
CPSF3-203ENST00000475482 NFIAQ12857 509 aa19.12■□□□□ 0.65
CPSF3-203ENST00000475482 SPATA5Q8NB90 893 aa19.12■□□□□ 0.65
CPSF3-203ENST00000475482 HOOK2Q96ED9 719 aa19.12■□□□□ 0.65
CPSF3-203ENST00000475482 IDI2Q9BXS1 227 aa19.12■□□□□ 0.65
CPSF3-203ENST00000475482 MCOLN1Q9GZU1 580 aa19.12■□□□□ 0.65
CPSF3-203ENST00000475482 FAM198AQ9UFP1 575 aa19.12■□□□□ 0.65
CPSF3-203ENST00000475482 ABCF2Q9UG63 623 aa19.12■□□□□ 0.65
CPSF3-203ENST00000475482 AK9Q5TCS8 1911 aa19.12■□□□□ 0.65
CPSF3-203ENST00000475482 TBC1D8O95759 1140 aa19.11■□□□□ 0.65
CPSF3-203ENST00000475482 ALDH1A1P00352 501 aa19.11■□□□□ 0.65
CPSF3-203ENST00000475482 VGLL4Q14135 290 aa19.11■□□□□ 0.65
CPSF3-203ENST00000475482 PI16Q6UXB8 463 aa19.11■□□□□ 0.65
CPSF3-203ENST00000475482 IFNL1Q8IU54 200 aa19.11■□□□□ 0.65
CPSF3-203ENST00000475482 MS4A4AQ96JQ5 239 aa19.11■□□□□ 0.65
CPSF3-203ENST00000475482 ZNF512BQ96KM6 892 aaPredicted RBP19.11■□□□□ 0.65
CPSF3-203ENST00000475482 USP40Q9NVE5 1235 aa19.11■□□□□ 0.65
CPSF3-203ENST00000475482 IGF2BP3O00425 579 aaKnown RBP eCLIP19.1■□□□□ 0.65
CPSF3-203ENST00000475482 UQCRFS1P1P0C7P4 283 aa19.1■□□□□ 0.65
CPSF3-203ENST00000475482 MECOMQ03112 1051 aa19.1■□□□□ 0.65
CPSF3-203ENST00000475482 GORABQ5T7V8 394 aa19.1■□□□□ 0.65
CPSF3-203ENST00000475482 ERICH6Q7L0X2 663 aa19.1■□□□□ 0.65
CPSF3-203ENST00000475482 SLF2Q8IX21 1173 aa19.1■□□□□ 0.65
CPSF3-203ENST00000475482 OPTNQ96CV9 577 aa19.1■□□□□ 0.65
CPSF3-203ENST00000475482 DBNDD2Q9BQY9 259 aa19.1■□□□□ 0.65
CPSF3-203ENST00000475482 R3HDMLQ9H3Y0 253 aa19.1■□□□□ 0.65
CPSF3-203ENST00000475482 ELP3Q9H9T3 547 aa19.1■□□□□ 0.65
CPSF3-203ENST00000475482 ZNF112Q9UJU3 913 aa19.1■□□□□ 0.65
CPSF3-203ENST00000475482 MROH7-TTC4A0A0A0MT08 1334 aa19.09■□□□□ 0.65
CPSF3-203ENST00000475482 GPR75-ASB3A0A0A6YYF3 556 aa19.09■□□□□ 0.65
CPSF3-203ENST00000475482 GPR25O00155 361 aa19.09■□□□□ 0.65
CPSF3-203ENST00000475482 DGKZQ13574 1117 aa19.09■□□□□ 0.65
CPSF3-203ENST00000475482 DCAF15Q66K64 600 aa19.09■□□□□ 0.65
CPSF3-203ENST00000475482 DZIP1Q86YF9 867 aaKnown RBP19.09■□□□□ 0.65
CPSF3-203ENST00000475482 SMC5Q8IY18 1101 aa19.09■□□□□ 0.65
CPSF3-203ENST00000475482 ZNF296Q8WUU4 475 aaPredicted RBP19.09■□□□□ 0.65
CPSF3-203ENST00000475482 NSUN4Q96CB9 384 aaKnown RBP19.09■□□□□ 0.65
CPSF3-203ENST00000475482 PTPN18Q99952 460 aa19.09■□□□□ 0.65
CPSF3-203ENST00000475482 SNCAIPQ9Y6H5 919 aa19.09■□□□□ 0.65
CPSF3-203ENST00000475482 ATRNL1Q5VV63 1379 aa19.08■□□□□ 0.65
CPSF3-203ENST00000475482 MYO5AQ9Y4I1 1855 aaKnown RBP19.08■□□□□ 0.65
CPSF3-203ENST00000475482 SPDYE5A6NIY4 337 aa19.08■□□□□ 0.64
CPSF3-203ENST00000475482 ENTPD3O75355 529 aa19.08■□□□□ 0.64
CPSF3-203ENST00000475482 WDHD1O75717 1129 aaPredicted RBP19.08■□□□□ 0.64
CPSF3-203ENST00000475482 RHBDL3P58872 404 aa19.08■□□□□ 0.64
CPSF3-203ENST00000475482 TCP10Q12799 353 aa19.08■□□□□ 0.64
CPSF3-203ENST00000475482 OS9Q13438 667 aaPredicted RBP19.08■□□□□ 0.64
CPSF3-203ENST00000475482 TBC1D9Q6ZT07 1266 aa19.08■□□□□ 0.64
CPSF3-203ENST00000475482 ZFPM1Q8IX07 1006 aa19.08■□□□□ 0.64
CPSF3-203ENST00000475482 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.64
CPSF3-203ENST00000475482 EAF2Q96CJ1 260 aaPredicted RBP19.08■□□□□ 0.64
CPSF3-203ENST00000475482 DBNLQ9UJU6 430 aaKnown RBP19.08■□□□□ 0.64
CPSF3-203ENST00000475482 CSADQ9Y600 493 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms