RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 PDS5AQ29RF7 1337 aaKnown RBP14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 UNCXA6NJT0 531 aa14.17□□□□□ -0.14
HLA-DOB-208ENST00000475235 NCLP19338 710 aaKnown RBP14.17□□□□□ -0.14
HLA-DOB-208ENST00000475235 MAP3K11Q16584 847 aa14.17□□□□□ -0.14
HLA-DOB-208ENST00000475235 XAGE2Q96GT9 111 aa14.17□□□□□ -0.14
HLA-DOB-208ENST00000475235 ANGEL1Q9UNK9 670 aaKnown RBP14.17□□□□□ -0.14
HLA-DOB-208ENST00000475235 AOX1Q06278 1338 aa14.17□□□□□ -0.14
HLA-DOB-208ENST00000475235 ARAP2Q8WZ64 1704 aa14.16□□□□□ -0.14
HLA-DOB-208ENST00000475235 LDHBP07195 334 aaKnown RBP14.16□□□□□ -0.14
HLA-DOB-208ENST00000475235 ADORA1P30542 326 aa14.16□□□□□ -0.14
HLA-DOB-208ENST00000475235 PRKG1Q13976 671 aa14.16□□□□□ -0.14
HLA-DOB-208ENST00000475235 NEUROD6Q96NK8 337 aa14.16□□□□□ -0.14
HLA-DOB-208ENST00000475235 ZIC5Q96T25 663 aa14.16□□□□□ -0.14
HLA-DOB-208ENST00000475235 SAGE1Q9NXZ1 904 aa14.16□□□□□ -0.14
HLA-DOB-208ENST00000475235 RCAN3Q9UKA8 241 aa14.16□□□□□ -0.14
HLA-DOB-208ENST00000475235 OS9Q13438 667 aaPredicted RBP14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 LDLRAD1Q5T700 205 aa14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 GORABQ5T7V8 394 aa14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 FKBP1CQ5VVH2 108 aa14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 APOBEC3HQ6NTF7 200 aaKnown RBP14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 PANK1Q8TE04 598 aa14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 CHMP4BQ9H444 224 aaKnown RBP14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 C1orf115Q9H7X2 142 aa14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 GPR108Q9NPR9 543 aa14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 TCP10L2B9ZVM9 353 aa14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 SURF6O75683 361 aaKnown RBP14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 IREB2P48200 963 aaKnown RBP14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 RASGRF1Q13972 1273 aa14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 NBPF12Q5TAG4 269 aaPredicted RBP14.15□□□□□ -0.14
HLA-DOB-208ENST00000475235 PRDX5P30044 214 aa14.14□□□□□ -0.15
HLA-DOB-208ENST00000475235 SPTY2D1Q68D10 685 aaPredicted RBP14.14□□□□□ -0.15
HLA-DOB-208ENST00000475235 FAM83AQ86UY5 434 aa14.14□□□□□ -0.15
HLA-DOB-208ENST00000475235 SLF2Q8IX21 1173 aa14.14□□□□□ -0.15
HLA-DOB-208ENST00000475235 HOOK2Q96ED9 719 aa14.14□□□□□ -0.15
HLA-DOB-208ENST00000475235 CSRNP1Q96S65 589 aa14.14□□□□□ -0.15
HLA-DOB-208ENST00000475235 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.14□□□□□ -0.15
HLA-DOB-208ENST00000475235 DDX19BQ9UMR2 479 aa14.14□□□□□ -0.15
HLA-DOB-208ENST00000475235 NOP58Q9Y2X3 529 aaKnown RBP14.14□□□□□ -0.15
HLA-DOB-208ENST00000475235 SSC5DA1L4H1 1573 aa14.13□□□□□ -0.15
HLA-DOB-208ENST00000475235 POLR2AP24928 1970 aaKnown RBP14.13□□□□□ -0.15
HLA-DOB-208ENST00000475235 CEP85Q6P2H3 762 aa14.13□□□□□ -0.15
HLA-DOB-208ENST00000475235 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.13□□□□□ -0.15
HLA-DOB-208ENST00000475235 TEPSINQ96N21 525 aa14.13□□□□□ -0.15
HLA-DOB-208ENST00000475235 UQCRFS1P1P0C7P4 283 aa14.12□□□□□ -0.15
HLA-DOB-208ENST00000475235 SREBF2Q12772 1141 aa14.12□□□□□ -0.15
HLA-DOB-208ENST00000475235 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.12□□□□□ -0.15
HLA-DOB-208ENST00000475235 DZIP1Q86YF9 867 aaKnown RBP14.12□□□□□ -0.15
HLA-DOB-208ENST00000475235 ANKRD13AQ8IZ07 590 aa14.12□□□□□ -0.15
HLA-DOB-208ENST00000475235 SLC10A4Q96EP9 437 aa14.12□□□□□ -0.15
HLA-DOB-208ENST00000475235 TMEM39BQ9GZU3 492 aa14.12□□□□□ -0.15
HLA-DOB-208ENST00000475235 ABCF2Q9UG63 623 aa14.12□□□□□ -0.15
HLA-DOB-208ENST00000475235 TSKSQ9UJT2 592 aa14.12□□□□□ -0.15
HLA-DOB-208ENST00000475235 DAGLAQ9Y4D2 1042 aa14.12□□□□□ -0.15
HLA-DOB-208ENST00000475235 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.12□□□□□ -0.15
HLA-DOB-208ENST00000475235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.12□□□□□ -0.15
HLA-DOB-208ENST00000475235 USP2O75604 605 aaPredicted RBP14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 ZBTB48P10074 688 aaPredicted RBP14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 CACNB3P54284 484 aa14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 DIXDC1Q155Q3 683 aa14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 TNNI3KQ59H18 835 aa14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 CCDC158Q5M9N0 1113 aa14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 SPRYD7Q5W111 196 aa14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 SPATA5Q8NB90 893 aa14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 RNF186Q9NXI6 227 aa14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 FZD1Q9UP38 647 aa14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 FPGT-TNNI3KV9GXZ4 949 aa14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 RPAP1Q9BWH6 1393 aaPredicted RBP14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 ECM29Q5VYK3 1845 aa14.11□□□□□ -0.15
HLA-DOB-208ENST00000475235 TM4SF4P48230 202 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 HSP90AB4PQ58FF6 505 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 ERC1Q8IUD2 1116 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 RPAP2Q8IXW5 612 aaPredicted RBP14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 HMG20BQ9P0W2 317 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 COG6Q9Y2V7 657 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 MANSC4A6NHS7 340 aaPredicted RBP14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 IGSF3O75054 1194 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 TRPA1O75762 1119 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 INHBEP58166 350 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 PDE3AQ14432 1141 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 CDC42EP5Q6NZY7 148 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 FAM151AQ8WW52 585 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 FAM163AQ96GL9 167 aaPredicted RBP14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 USP40Q9NVE5 1235 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 GAKO14976 1311 aa14.1□□□□□ -0.15
HLA-DOB-208ENST00000475235 HMMRO75330 724 aa14.09□□□□□ -0.15
HLA-DOB-208ENST00000475235 GSTO1P78417 241 aa14.09□□□□□ -0.15
HLA-DOB-208ENST00000475235 MKRN3Q13064 507 aaKnown RBP14.09□□□□□ -0.15
HLA-DOB-208ENST00000475235 TTC39AQ5SRH9 613 aa14.09□□□□□ -0.15
HLA-DOB-208ENST00000475235 DCAF15Q66K64 600 aa14.09□□□□□ -0.15
HLA-DOB-208ENST00000475235 CDAN1Q8IWY9 1227 aa14.09□□□□□ -0.15
HLA-DOB-208ENST00000475235 WNK4Q96J92 1243 aa14.09□□□□□ -0.15
HLA-DOB-208ENST00000475235 ZBTB40Q9NUA8 1239 aa14.09□□□□□ -0.15
HLA-DOB-208ENST00000475235 ALDH1A1P00352 501 aa14.08□□□□□ -0.16
HLA-DOB-208ENST00000475235 MAP3K9P80192 1104 aa14.08□□□□□ -0.16
HLA-DOB-208ENST00000475235 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.08□□□□□ -0.16
HLA-DOB-208ENST00000475235 CLMNQ96JQ2 1002 aa14.08□□□□□ -0.16
HLA-DOB-208ENST00000475235 ZNF512BQ96KM6 892 aaPredicted RBP14.08□□□□□ -0.16
HLA-DOB-208ENST00000475235 DBNDD2Q9BQY9 259 aa14.08□□□□□ -0.16
HLA-DOB-208ENST00000475235 CSADQ9Y600 493 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms