RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 ME3Q16798 604 aa12.08□□□□□ -0.48
PCCB-213ENST00000475214 DZIP1Q86YF9 867 aaKnown RBP12.08□□□□□ -0.48
PCCB-213ENST00000475214 LCORLQ8N3X6 602 aa12.08□□□□□ -0.48
PCCB-213ENST00000475214 MPNDQ8N594 471 aa12.08□□□□□ -0.48
PCCB-213ENST00000475214 NSUN4Q96CB9 384 aaKnown RBP12.08□□□□□ -0.48
PCCB-213ENST00000475214 CHMP4CQ96CF2 233 aa12.08□□□□□ -0.48
PCCB-213ENST00000475214 CD209Q9NNX6 404 aa12.08□□□□□ -0.48
PCCB-213ENST00000475214 POLLQ9UGP5 575 aa12.08□□□□□ -0.48
PCCB-213ENST00000475214 TPCN1Q9ULQ1 816 aa12.08□□□□□ -0.48
PCCB-213ENST00000475214 SMC3Q9UQE7 1217 aa12.08□□□□□ -0.48
PCCB-213ENST00000475214 GSG1L2A8MUP6 293 aa12.07□□□□□ -0.48
PCCB-213ENST00000475214 LDHBP07195 334 aaKnown RBP12.07□□□□□ -0.48
PCCB-213ENST00000475214 IL1R1P14778 569 aa12.07□□□□□ -0.48
PCCB-213ENST00000475214 MCM5P33992 734 aa12.07□□□□□ -0.48
PCCB-213ENST00000475214 FSTL1Q12841 308 aa12.07□□□□□ -0.48
PCCB-213ENST00000475214 CACNA1SQ13698 1873 aa12.07□□□□□ -0.48
PCCB-213ENST00000475214 DPP8Q6V1X1 898 aaPredicted RBP12.07□□□□□ -0.48
PCCB-213ENST00000475214 CCDC83Q8IWF9 413 aa12.07□□□□□ -0.48
PCCB-213ENST00000475214 GPR101Q96P66 508 aaPredicted RBP12.07□□□□□ -0.48
PCCB-213ENST00000475214 EYA3Q99504 573 aa12.07□□□□□ -0.48
PCCB-213ENST00000475214 MAST2Q6P0Q8 1798 aa12.07□□□□□ -0.48
PCCB-213ENST00000475214 WDR19Q8NEZ3 1342 aa12.07□□□□□ -0.48
PCCB-213ENST00000475214 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
PCCB-213ENST00000475214 DUOX1Q9NRD9 1551 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 DLEC1Q9Y238 1755 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 PRKAB2O43741 272 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 LARGE1O95461 756 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 LDHCP07864 332 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 PTMSP20962 102 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 KCNA4P22459 653 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 PRDX5P30044 214 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 MCM4P33991 863 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 DPY19L2Q6NUT2 758 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 ADGRA1Q86SQ6 560 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 SLC51AQ86UW1 340 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 FBXL16Q8N461 479 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 TBC1D22AQ8WUA7 517 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 BRF1Q92994 677 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 RIOK1Q9BRS2 568 aaKnown RBP12.06□□□□□ -0.48
PCCB-213ENST00000475214 NOL10Q9BSC4 688 aaKnown RBP12.06□□□□□ -0.48
PCCB-213ENST00000475214 AGXT2Q9BYV1 514 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 ZC3H12CQ9C0D7 883 aaKnown RBP12.06□□□□□ -0.48
PCCB-213ENST00000475214 COA1Q9GZY4 146 aa12.06□□□□□ -0.48
PCCB-213ENST00000475214 EPB41L4AQ9HCS5 686 aaPredicted RBP12.06□□□□□ -0.48
PCCB-213ENST00000475214 DDX11L8A8MPP1 907 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 G3V3G9 751 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 GOLGA6L22H0YM25 854 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 PRC1O43663 620 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 PDIA4P13667 645 aaKnown RBP12.05□□□□□ -0.48
PCCB-213ENST00000475214 DYNLL1P63167 89 aaKnown RBP12.05□□□□□ -0.48
PCCB-213ENST00000475214 RASSF7Q02833 373 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 COL9A3Q14050 684 aaPredicted RBP12.05□□□□□ -0.48
PCCB-213ENST00000475214 DCAF8Q5TAQ9 597 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 GIMAP6Q6P9H5 292 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 MB21D2Q8IYB1 491 aaPredicted RBP12.05□□□□□ -0.48
PCCB-213ENST00000475214 NECAB1Q8N987 351 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 JMYQ8N9B5 988 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 KLRG1Q96E93 195 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 LRRC2Q9BYS8 371 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 CRNKL1Q9BZJ0 848 aaKnown RBP12.05□□□□□ -0.48
PCCB-213ENST00000475214 RNF41Q9H4P4 317 aaPredicted RBP12.05□□□□□ -0.48
PCCB-213ENST00000475214 CNNM2Q9H8M5 875 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 JAG2Q9Y219 1238 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 SBF1O95248 1867 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 LTBP1Q14766 1721 aa12.05□□□□□ -0.48
PCCB-213ENST00000475214 GLTPD2A6NH11 291 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 RIMBP2O15034 1052 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 C21orf2O43822 256 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 BAG3O95817 575 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 GJB2P29033 226 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 HTRA3P83110 453 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 STK3Q13188 491 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 CLEC17AQ6ZS10 378 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 CERS3Q8IU89 383 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 TBC1D10CQ8IV04 446 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 SLF2Q8IX21 1173 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 ZNF384Q8TF68 577 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 ZNF274Q96GC6 653 aaPredicted RBP12.04□□□□□ -0.48
PCCB-213ENST00000475214 KRT23Q9C075 422 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 WDR33Q9C0J8 1336 aaKnown RBP12.04□□□□□ -0.48
PCCB-213ENST00000475214 LTBP3Q9NS15 1303 aa12.04□□□□□ -0.48
PCCB-213ENST00000475214 PFKFB2O60825 505 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 BRD1O95696 1058 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 VEGFAP15692 232 aaPredicted RBP12.03□□□□□ -0.48
PCCB-213ENST00000475214 CTDSPL2Q05D32 466 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 PPARAQ07869 468 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 APOBRQ0VD83 1088 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 AKNAD1Q5T1N1 836 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 CC2D2BQ6DHV5 1058 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 MFSD6Q6ZSS7 791 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 CHST3Q7LGC8 479 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 SDR42E1Q8WUS8 393 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 STAG1Q8WVM7 1258 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 GTF3C6Q969F1 213 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 NBPF3Q9H094 633 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 TAOK3Q9H2K8 898 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 RRAGCQ9HB90 399 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 AATFQ9NY61 560 aaKnown RBP eCLIP12.03□□□□□ -0.48
PCCB-213ENST00000475214 FAM205AQ6ZU69 1335 aa12.03□□□□□ -0.48
PCCB-213ENST00000475214 MINDY4BA8MYZ0 360 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms