RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 SSU72Q9NP77 194 aaKnown RBP1.98□□□□□ -2.09
HDAC9-222ENST00000474742 CCDC87Q9NVE4 849 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 CNTN3Q9P232 1028 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 SALL4Q9UJQ4 1053 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 SOX13Q9UN79 622 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 USTQ9Y2C2 406 aa1.98□□□□□ -2.09
HDAC9-222ENST00000474742 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.98□□□□□ -2.09
HDAC9-222ENST00000474742 ICMTO60725 284 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 RNGTTO60942 597 aaKnown RBP1.97□□□□□ -2.09
HDAC9-222ENST00000474742 PHACTR2O75167 634 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 DLGAP3O95886 979 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 PDGFAP04085 211 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 FAM87AP0C7U9 286 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 CD8BP10966 210 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 ITIH2P19823 946 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 CFPP27918 469 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 CTSWP56202 376 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 HNRNPUQ00839 825 aaKnown RBP eCLIP1.97□□□□□ -2.09
HDAC9-222ENST00000474742 PRKCQQ04759 706 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 IKZF1Q13422 519 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 AOC3Q16853 763 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 SYDE1Q6ZW31 735 aaPredicted RBP1.97□□□□□ -2.09
HDAC9-222ENST00000474742 ERICH6Q7L0X2 663 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 LRRN4CLQ8ND94 238 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 BHLHE22Q8NFJ8 381 aaPredicted RBP1.97□□□□□ -2.09
HDAC9-222ENST00000474742 EDEM1Q92611 657 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 EZH1Q92800 747 aaPredicted RBP1.97□□□□□ -2.09
HDAC9-222ENST00000474742 NXPE3Q969Y0 559 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 HRASLS5Q96KN8 279 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 HHIPQ96QV1 700 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 ZKSCAN3Q9BRR0 538 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 CHRDQ9H2X0 955 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 SOX17Q9H6I2 414 aaPredicted RBP1.97□□□□□ -2.09
HDAC9-222ENST00000474742 MBNL3Q9NUK0 354 aaKnown RBP1.97□□□□□ -2.09
HDAC9-222ENST00000474742 FAM105AQ9NUU6 356 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 VAV3Q9UKW4 847 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 POLIQ9UNA4 740 aa1.97□□□□□ -2.09
HDAC9-222ENST00000474742 TMEM265A0A087WTH1 108 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 NFKBIEO00221 500 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 TSPAN15O95858 294 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 ABL1P00519 1130 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 TMEM253P0C7T8 217 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 ESRRAP11474 423 aaPredicted RBP1.96□□□□□ -2.1
HDAC9-222ENST00000474742 CD96P40200 585 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 BUD31P41223 144 aaPredicted RBP1.96□□□□□ -2.1
HDAC9-222ENST00000474742 AFMP43652 599 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 FKBP4Q02790 459 aaKnown RBP eCLIP1.96□□□□□ -2.1
HDAC9-222ENST00000474742 PCDH1Q08174 1060 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 CDK5R2Q13319 367 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 IFI16Q16666 785 aaKnown RBP1.96□□□□□ -2.1
HDAC9-222ENST00000474742 NOM1Q5C9Z4 860 aaKnown RBP1.96□□□□□ -2.1
HDAC9-222ENST00000474742 TMEM67Q5HYA8 995 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 CIAPIN1Q6FI81 312 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 XKR5Q6UX68 686 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 VN1R5Q7Z5H4 357 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 GLIS3Q8NEA6 775 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 GATA6Q92908 595 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 LIN37Q96GY3 246 aaPredicted RBP1.96□□□□□ -2.1
HDAC9-222ENST00000474742 KRTAP4-5Q9BYR2 181 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 ACSS3Q9H6R3 686 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 LMCD1Q9NZU5 365 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 FOXD3Q9UJU5 478 aaPredicted RBP1.96□□□□□ -2.1
HDAC9-222ENST00000474742 ADAMTS6Q9UKP5 1117 aa1.96□□□□□ -2.1
HDAC9-222ENST00000474742 TCAF2A6NFQ2 919 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 SOWAHDA6NJG2 315 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 NPIPB6E9PJ23 425 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 H3BRB1 525 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 EREGO14944 169 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 DYNC1LI2O43237 492 aaPredicted RBP1.95□□□□□ -2.1
HDAC9-222ENST00000474742 TNFRSF21O75509 655 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 SLFN14P0C7P3 912 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 MZF1P28698 734 aaPredicted RBP1.95□□□□□ -2.1
HDAC9-222ENST00000474742 MESP2Q0VG99 397 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 PEAR1Q5VY43 1037 aaPredicted RBP1.95□□□□□ -2.1
HDAC9-222ENST00000474742 USPL1Q5W0Q7 1092 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 SLC23A3Q6PIS1 610 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 SIAH1Q8IUQ4 282 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 GJD3Q8N144 294 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 DIRC2Q96SL1 478 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 CLEC4MQ9H2X3 399 aaPredicted RBP1.95□□□□□ -2.1
HDAC9-222ENST00000474742 TUT1Q9H6E5 874 aaKnown RBP1.95□□□□□ -2.1
HDAC9-222ENST00000474742 PRDM7Q9NQW5 492 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 LATS2Q9NRM7 1088 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 C1GALT1Q9NS00 363 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 EGFL7Q9UHF1 273 aa1.95□□□□□ -2.1
HDAC9-222ENST00000474742 GNEQ9Y223 722 aaKnown RBP1.95□□□□□ -2.1
HDAC9-222ENST00000474742 A0A096LPE4 126 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 A0A1W2PPZ6 126 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 METTL12A8MUP2 240 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 GPR182O15218 404 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 AOC2O75106 756 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 FAM13AO94988 1023 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 BRD1O95696 1058 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 POLR3DP05423 398 aaPredicted RBP1.94□□□□□ -2.1
HDAC9-222ENST00000474742 CEACAM5P06731 702 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 INHBBP09529 407 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 C1QTNF9P0C862 333 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 ZP2Q05996 745 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 ORC1Q13415 861 aa1.94□□□□□ -2.1
HDAC9-222ENST00000474742 SF3B2Q13435 895 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms