RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 HELLSQ9NRZ9 838 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 DIAPH3Q9NSV4 1193 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 DAGLAQ9Y4D2 1042 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 PCDHAC2Q9Y5I4 1007 aa12.07□□□□□ -0.48
COL8A1-206ENST00000474648 GLTPD2A6NH11 291 aa12.06□□□□□ -0.48
COL8A1-206ENST00000474648 SGSM2O43147 1006 aa12.06□□□□□ -0.48
COL8A1-206ENST00000474648 MMP14P50281 582 aa12.06□□□□□ -0.48
COL8A1-206ENST00000474648 DYNLL1P63167 89 aaKnown RBP12.06□□□□□ -0.48
COL8A1-206ENST00000474648 SLF2Q8IX21 1173 aa12.06□□□□□ -0.48
COL8A1-206ENST00000474648 MIGA1Q8NAN2 632 aa12.06□□□□□ -0.48
COL8A1-206ENST00000474648 ZBED3Q96IU2 234 aaPredicted RBP12.06□□□□□ -0.48
COL8A1-206ENST00000474648 ZDHHC15Q96MV8 337 aa12.06□□□□□ -0.48
COL8A1-206ENST00000474648 STRBPQ96SI9 672 aaKnown RBP12.06□□□□□ -0.48
COL8A1-206ENST00000474648 RIOK1Q9BRS2 568 aaKnown RBP12.06□□□□□ -0.48
COL8A1-206ENST00000474648 ESYT1Q9BSJ8 1104 aa12.06□□□□□ -0.48
COL8A1-206ENST00000474648 CNOT7Q9UIV1 285 aaKnown RBP12.06□□□□□ -0.48
COL8A1-206ENST00000474648 SERPINA10Q9UK55 444 aa12.06□□□□□ -0.48
COL8A1-206ENST00000474648 MROH7-TTC4A0A0A0MT08 1334 aa12.06□□□□□ -0.48
COL8A1-206ENST00000474648 MAST3O60307 1309 aa12.06□□□□□ -0.48
COL8A1-206ENST00000474648 ZNF646O15015 1829 aaPredicted RBP12.05□□□□□ -0.48
COL8A1-206ENST00000474648 SEC24BO95487 1268 aa12.05□□□□□ -0.48
COL8A1-206ENST00000474648 RHBDL3P58872 404 aa12.05□□□□□ -0.48
COL8A1-206ENST00000474648 CFAP100Q494V2 611 aa12.05□□□□□ -0.48
COL8A1-206ENST00000474648 DPY19L2Q6NUT2 758 aa12.05□□□□□ -0.48
COL8A1-206ENST00000474648 CCDC129Q6ZRS4 1044 aa12.05□□□□□ -0.48
COL8A1-206ENST00000474648 ZNF589Q86UQ0 364 aaPredicted RBP12.05□□□□□ -0.48
COL8A1-206ENST00000474648 MICALL2Q8IY33 904 aa12.05□□□□□ -0.48
COL8A1-206ENST00000474648 MTMR14Q8NCE2 650 aa12.05□□□□□ -0.48
COL8A1-206ENST00000474648 TEKT1Q969V4 418 aa12.05□□□□□ -0.48
COL8A1-206ENST00000474648 L3MBTL3Q96JM7 780 aaPredicted RBP12.05□□□□□ -0.48
COL8A1-206ENST00000474648 PRMT6Q96LA8 375 aaPredicted RBP12.05□□□□□ -0.48
COL8A1-206ENST00000474648 GPRC5DQ9NZD1 345 aa12.05□□□□□ -0.48
COL8A1-206ENST00000474648 HDAC9Q9UKV0 1011 aa12.05□□□□□ -0.48
COL8A1-206ENST00000474648 MAGEB6P1A0A0J9YX57 407 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 POTECB2RU33 542 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 FOXP2O15409 715 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 GABBR2O75899 941 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 MBD4O95243 580 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 EGFRP00533 1210 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 EPS15P42566 896 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 BTDP43251 543 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 LCORLQ8N3X6 602 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 OGFOD1Q8N543 542 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 RUFY2Q8WXA3 655 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 PHF12Q96QT6 1004 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 ARMT1Q9H993 441 aa12.04□□□□□ -0.48
COL8A1-206ENST00000474648 AATFQ9NY61 560 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL8A1-206ENST00000474648 GPAA1O43292 621 aa12.03□□□□□ -0.48
COL8A1-206ENST00000474648 PRKAB2O43741 272 aa12.03□□□□□ -0.48
COL8A1-206ENST00000474648 BAG3O95817 575 aa12.03□□□□□ -0.48
COL8A1-206ENST00000474648 VPS53Q5VIR6 699 aa12.03□□□□□ -0.48
COL8A1-206ENST00000474648 CDC42EP5Q6NZY7 148 aa12.03□□□□□ -0.48
COL8A1-206ENST00000474648 CASC1Q6TDU7 716 aa12.03□□□□□ -0.48
COL8A1-206ENST00000474648 SAMD7Q7Z3H4 446 aa12.03□□□□□ -0.48
COL8A1-206ENST00000474648 SH3RF3Q8TEJ3 882 aaPredicted RBP12.03□□□□□ -0.48
COL8A1-206ENST00000474648 BACH2Q9BYV9 841 aa12.03□□□□□ -0.48
COL8A1-206ENST00000474648 MYOZ2Q9NPC6 264 aa12.03□□□□□ -0.48
COL8A1-206ENST00000474648 CCDC88AQ3V6T2 1871 aa12.03□□□□□ -0.48
COL8A1-206ENST00000474648 RAD50Q92878 1312 aa12.03□□□□□ -0.48
COL8A1-206ENST00000474648 DICER1Q9UPY3 1922 aaKnown RBP12.03□□□□□ -0.48
COL8A1-206ENST00000474648 H7C1D1 291 aa12.02□□□□□ -0.49
COL8A1-206ENST00000474648 WNT10BO00744 389 aa12.02□□□□□ -0.49
COL8A1-206ENST00000474648 RBM5P52756 815 aaKnown RBP eCLIP12.02□□□□□ -0.49
COL8A1-206ENST00000474648 HIRAP54198 1017 aaPredicted RBP12.02□□□□□ -0.49
COL8A1-206ENST00000474648 PTH1RQ03431 593 aa12.02□□□□□ -0.49
COL8A1-206ENST00000474648 DLGAP5Q15398 846 aa12.02□□□□□ -0.49
COL8A1-206ENST00000474648 TBC1D10BQ4KMP7 808 aaPredicted RBP12.02□□□□□ -0.49
COL8A1-206ENST00000474648 RBM26Q5T8P6 1007 aaKnown RBP12.02□□□□□ -0.49
COL8A1-206ENST00000474648 AIDAQ96BJ3 306 aa12.02□□□□□ -0.49
COL8A1-206ENST00000474648 LSG1Q9H089 658 aaKnown RBP12.02□□□□□ -0.49
COL8A1-206ENST00000474648 USP40Q9NVE5 1235 aa12.02□□□□□ -0.49
COL8A1-206ENST00000474648 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
COL8A1-206ENST00000474648 PSME4Q14997 1843 aa12.02□□□□□ -0.49
COL8A1-206ENST00000474648 DOCK2Q92608 1830 aa12.02□□□□□ -0.49
COL8A1-206ENST00000474648 MYO5AQ9Y4I1 1855 aaKnown RBP12.02□□□□□ -0.49
COL8A1-206ENST00000474648 GSG1L2A8MUP6 293 aa12.01□□□□□ -0.49
COL8A1-206ENST00000474648 PATL2C9JE40 543 aaKnown RBP12.01□□□□□ -0.49
COL8A1-206ENST00000474648 HSPD1P10809 573 aaKnown RBP12.01□□□□□ -0.49
COL8A1-206ENST00000474648 NBPF9Q3BBW0 867 aa12.01□□□□□ -0.49
COL8A1-206ENST00000474648 TRPM4Q8TD43 1214 aa12.01□□□□□ -0.49
COL8A1-206ENST00000474648 TDRD3Q9H7E2 651 aaKnown RBP12.01□□□□□ -0.49
COL8A1-206ENST00000474648 MKRN1Q9UHC7 482 aaKnown RBP12.01□□□□□ -0.49
COL8A1-206ENST00000474648 WDHD1O75717 1129 aaPredicted RBP12□□□□□ -0.49
COL8A1-206ENST00000474648 PLCG2P16885 1265 aa12□□□□□ -0.49
COL8A1-206ENST00000474648 CERS3Q8IU89 383 aa12□□□□□ -0.49
COL8A1-206ENST00000474648 MAP4K1Q92918 833 aa12□□□□□ -0.49
COL8A1-206ENST00000474648 NOL10Q9BSC4 688 aaKnown RBP12□□□□□ -0.49
COL8A1-206ENST00000474648 USP26Q9BXU7 913 aa12□□□□□ -0.49
COL8A1-206ENST00000474648 ADARB2Q9NS39 739 aaKnown RBP12□□□□□ -0.49
COL8A1-206ENST00000474648 ZNF70Q9UC06 446 aaPredicted RBP12□□□□□ -0.49
COL8A1-206ENST00000474648 SLC4A4Q9Y6R1 1079 aa12□□□□□ -0.49
COL8A1-206ENST00000474648 ASTN2O75129 1339 aaPredicted RBP12□□□□□ -0.49
COL8A1-206ENST00000474648 MYH13Q9UKX3 1938 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 GNAT2P19087 354 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 LMOD1P29536 600 aaPredicted RBP11.99□□□□□ -0.49
COL8A1-206ENST00000474648 CACNB3P54284 484 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 MFAP1P55081 439 aaKnown RBP11.99□□□□□ -0.49
COL8A1-206ENST00000474648 NFIAQ12857 509 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 ALX1Q15699 326 aa11.99□□□□□ -0.49
COL8A1-206ENST00000474648 KIF4BQ2VIQ3 1234 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms