RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 CFHR5Q9BXR6 569 aa18.67■□□□□ 0.58
VARS-223ENST00000474643 ABCF2Q9UG63 623 aa18.67■□□□□ 0.58
VARS-223ENST00000474643 HPS5Q9UPZ3 1129 aa18.67■□□□□ 0.58
VARS-223ENST00000474643 CCL15-CCL14A0A0B4J2E2 113 aa18.66■□□□□ 0.58
VARS-223ENST00000474643 IGF2BP3O00425 579 aaKnown RBP eCLIP18.66■□□□□ 0.58
VARS-223ENST00000474643 PRDX5P30044 214 aa18.66■□□□□ 0.58
VARS-223ENST00000474643 GTF2A2P52657 109 aa18.66■□□□□ 0.58
VARS-223ENST00000474643 TCP10Q12799 353 aa18.66■□□□□ 0.58
VARS-223ENST00000474643 G3BP1Q13283 466 aaKnown RBP eCLIP18.66■□□□□ 0.583e-7■■■■■ 31.6
VARS-223ENST00000474643 OS9Q13438 667 aaPredicted RBP18.66■□□□□ 0.58
VARS-223ENST00000474643 CCL15Q16663 113 aa18.66■□□□□ 0.58
VARS-223ENST00000474643 SPTY2D1Q68D10 685 aaPredicted RBP18.66■□□□□ 0.58
VARS-223ENST00000474643 CCDC102BQ68D86 513 aa18.66■□□□□ 0.58
VARS-223ENST00000474643 PANK1Q8TE04 598 aa18.66■□□□□ 0.58
VARS-223ENST00000474643 DAGLAQ9Y4D2 1042 aa18.66■□□□□ 0.58
VARS-223ENST00000474643 A0A1B0GUL7 405 aa18.65■□□□□ 0.58
VARS-223ENST00000474643 RLBP1P12271 317 aa18.65■□□□□ 0.58
VARS-223ENST00000474643 ADORA1P30542 326 aa18.65■□□□□ 0.58
VARS-223ENST00000474643 GJA5P36382 358 aa18.65■□□□□ 0.58
VARS-223ENST00000474643 TFCP2Q12800 502 aa18.65■□□□□ 0.58
VARS-223ENST00000474643 FBXO46Q6PJ61 603 aaPredicted RBP18.65■□□□□ 0.58
VARS-223ENST00000474643 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.65■□□□□ 0.58
VARS-223ENST00000474643 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.65■□□□□ 0.58
VARS-223ENST00000474643 ERO1AQ96HE7 468 aa18.65■□□□□ 0.58
VARS-223ENST00000474643 ZNF341Q9BYN7 854 aa18.65■□□□□ 0.58
VARS-223ENST00000474643 USP40Q9NVE5 1235 aa18.65■□□□□ 0.58
VARS-223ENST00000474643 TRIM17Q9Y577 477 aa18.65■□□□□ 0.58
VARS-223ENST00000474643 OTOFQ9HC10 1997 aa18.64■□□□□ 0.58
VARS-223ENST00000474643 TIMM10P62072 90 aa18.64■□□□□ 0.57
VARS-223ENST00000474643 CRHR2Q13324 411 aa18.64■□□□□ 0.57
VARS-223ENST00000474643 FAM151AQ8WW52 585 aa18.64■□□□□ 0.57
VARS-223ENST00000474643 R3HDMLQ9H3Y0 253 aa18.64■□□□□ 0.57
VARS-223ENST00000474643 RPAP1Q9BWH6 1393 aaPredicted RBP18.64■□□□□ 0.57
VARS-223ENST00000474643 RGS19P49795 217 aa18.63■□□□□ 0.57
VARS-223ENST00000474643 ARHGEF6Q15052 776 aa18.63■□□□□ 0.57
VARS-223ENST00000474643 TAF1CQ15572 869 aaPredicted RBP18.63■□□□□ 0.57
VARS-223ENST00000474643 MIGA2Q7L4E1 593 aa18.63■□□□□ 0.57
VARS-223ENST00000474643 ERO1BQ86YB8 467 aa18.63■□□□□ 0.57
VARS-223ENST00000474643 ZSCAN29Q8IWY8 852 aaPredicted RBP18.63■□□□□ 0.57
VARS-223ENST00000474643 CNKSR2Q8WXI2 1034 aa18.63■□□□□ 0.57
VARS-223ENST00000474643 XAGE2Q96GT9 111 aa18.63■□□□□ 0.57
VARS-223ENST00000474643 ZFYVE28Q9HCC9 887 aa18.63■□□□□ 0.57
VARS-223ENST00000474643 SALL1Q9NSC2 1324 aa18.63■□□□□ 0.57
VARS-223ENST00000474643 SNAPC2Q13487 334 aa18.62■□□□□ 0.57
VARS-223ENST00000474643 MTX1Q13505 466 aa18.62■□□□□ 0.57
VARS-223ENST00000474643 RASGRF1Q13972 1273 aa18.62■□□□□ 0.57
VARS-223ENST00000474643 CDC42EP5Q6NZY7 148 aa18.62■□□□□ 0.57
VARS-223ENST00000474643 ZKSCAN4Q969J2 545 aaPredicted RBP18.62■□□□□ 0.57
VARS-223ENST00000474643 SPDYE5A6NIY4 337 aa18.61■□□□□ 0.57
VARS-223ENST00000474643 CETPP11597 493 aa18.61■□□□□ 0.57
VARS-223ENST00000474643 ERICH6Q7L0X2 663 aa18.61■□□□□ 0.57
VARS-223ENST00000474643 CD99L2Q8TCZ2 262 aa18.61■□□□□ 0.57
VARS-223ENST00000474643 C1orf115Q9H7X2 142 aa18.61■□□□□ 0.57
VARS-223ENST00000474643 AK9Q5TCS8 1911 aa18.61■□□□□ 0.57
VARS-223ENST00000474643 SP3Q02447 781 aa18.6■□□□□ 0.57
VARS-223ENST00000474643 EFCC1Q9HA90 598 aa18.6■□□□□ 0.57
VARS-223ENST00000474643 COG6Q9Y2V7 657 aa18.6■□□□□ 0.57
VARS-223ENST00000474643 SNCAIPQ9Y6H5 919 aa18.6■□□□□ 0.57
VARS-223ENST00000474643 TESPA1A2RU30 521 aaPredicted RBP18.59■□□□□ 0.57
VARS-223ENST00000474643 ZBTB7BO15156 539 aaPredicted RBP18.59■□□□□ 0.57
VARS-223ENST00000474643 GSTO1P78417 241 aa18.59■□□□□ 0.57
VARS-223ENST00000474643 NFIAQ12857 509 aa18.59■□□□□ 0.57
VARS-223ENST00000474643 PPIL2Q13356 520 aa18.59■□□□□ 0.57
VARS-223ENST00000474643 PICALMQ13492 652 aa18.59■□□□□ 0.57
VARS-223ENST00000474643 OTOP1Q7RTM1 612 aa18.59■□□□□ 0.57
VARS-223ENST00000474643 BRI3BPQ8WY22 251 aa18.59■□□□□ 0.57
VARS-223ENST00000474643 PTPN18Q99952 460 aa18.59■□□□□ 0.57
VARS-223ENST00000474643 NOL10Q9BSC4 688 aaKnown RBP18.59■□□□□ 0.57
VARS-223ENST00000474643 RAI14Q9P0K7 980 aa18.59■□□□□ 0.57
VARS-223ENST00000474643 DDX19BQ9UMR2 479 aa18.59■□□□□ 0.57
VARS-223ENST00000474643 PDS5AQ29RF7 1337 aaKnown RBP18.58■□□□□ 0.57
VARS-223ENST00000474643 KIF22Q14807 665 aa18.58■□□□□ 0.56
VARS-223ENST00000474643 MS4A4AQ96JQ5 239 aa18.58■□□□□ 0.56
VARS-223ENST00000474643 CHMP4BQ9H444 224 aaKnown RBP18.58■□□□□ 0.56
VARS-223ENST00000474643 PICK1Q9NRD5 415 aa18.58■□□□□ 0.56
VARS-223ENST00000474643 PNMA6EA0A0J9YXQ4 647 aa18.57■□□□□ 0.56
VARS-223ENST00000474643 IRF6O14896 467 aa18.57■□□□□ 0.56
VARS-223ENST00000474643 INPP5BP32019 993 aa18.57■□□□□ 0.56
VARS-223ENST00000474643 BTDP43251 543 aa18.57■□□□□ 0.56
VARS-223ENST00000474643 RGS3P49796 1198 aa18.57■□□□□ 0.56
VARS-223ENST00000474643 PPATQ06203 517 aa18.57■□□□□ 0.56
VARS-223ENST00000474643 TTC39AQ5SRH9 613 aa18.57■□□□□ 0.56
VARS-223ENST00000474643 SPATA5Q8NB90 893 aa18.57■□□□□ 0.56
VARS-223ENST00000474643 MROH7-TTC4A0A0A0MT08 1334 aa18.56■□□□□ 0.56
VARS-223ENST00000474643 LAMB1P07942 1786 aa18.56■□□□□ 0.56
VARS-223ENST00000474643 LDHCP07864 332 aa18.56■□□□□ 0.56
VARS-223ENST00000474643 UQCRFS1P1P0C7P4 283 aa18.56■□□□□ 0.56
VARS-223ENST00000474643 PDE3AQ14432 1141 aa18.56■□□□□ 0.56
VARS-223ENST00000474643 CCDC158Q5M9N0 1113 aa18.56■□□□□ 0.56
VARS-223ENST00000474643 FAM43AQ8N2R8 423 aa18.56■□□□□ 0.56
VARS-223ENST00000474643 LRP2BPQ9P2M1 347 aa18.56■□□□□ 0.56
VARS-223ENST00000474643 FAM198AQ9UFP1 575 aa18.56■□□□□ 0.56
VARS-223ENST00000474643 GAKO14976 1311 aa18.55■□□□□ 0.56
VARS-223ENST00000474643 ENTPD3O75355 529 aa18.55■□□□□ 0.56
VARS-223ENST00000474643 SURF6O75683 361 aaKnown RBP18.55■□□□□ 0.56
VARS-223ENST00000474643 MECOMQ03112 1051 aa18.55■□□□□ 0.56
VARS-223ENST00000474643 MYH2Q9UKX2 1941 aa18.55■□□□□ 0.56
VARS-223ENST00000474643 ATP8B2P98198 1209 aa18.54■□□□□ 0.56
VARS-223ENST00000474643 C20orf194Q5TEA3 1177 aa18.54■□□□□ 0.56
VARS-223ENST00000474643 ZCCHC17Q9NP64 241 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms