RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 MVPQ14764 893 aaKnown RBP25.2■■□□□ 1.62
PDLIM4-206ENST00000474421 FAM151AQ8WW52 585 aa25.2■■□□□ 1.62
PDLIM4-206ENST00000474421 R3HDMLQ9H3Y0 253 aa25.2■■□□□ 1.62
PDLIM4-206ENST00000474421 A0A1B0GUL7 405 aa25.19■■□□□ 1.62
PDLIM4-206ENST00000474421 TFCP2Q12800 502 aa25.19■■□□□ 1.62
PDLIM4-206ENST00000474421 DIXDC1Q155Q3 683 aa25.19■■□□□ 1.62
PDLIM4-206ENST00000474421 AK9Q5TCS8 1911 aa25.18■■□□□ 1.62
PDLIM4-206ENST00000474421 GTF2A2P52657 109 aa25.18■■□□□ 1.62
PDLIM4-206ENST00000474421 CDC42EP5Q6NZY7 148 aa25.18■■□□□ 1.62
PDLIM4-206ENST00000474421 SLF2Q8IX21 1173 aa25.18■■□□□ 1.62
PDLIM4-206ENST00000474421 XAGE2Q96GT9 111 aa25.18■■□□□ 1.62
PDLIM4-206ENST00000474421 WRNIP1Q96S55 665 aa25.18■■□□□ 1.62
PDLIM4-206ENST00000474421 TNNQ9UQP3 1299 aa25.18■■□□□ 1.62
PDLIM4-206ENST00000474421 SPTY2D1Q68D10 685 aaPredicted RBP25.17■■□□□ 1.62
PDLIM4-206ENST00000474421 MS4A4AQ96JQ5 239 aa25.17■■□□□ 1.62
PDLIM4-206ENST00000474421 ZNF341Q9BYN7 854 aa25.17■■□□□ 1.62
PDLIM4-206ENST00000474421 HPS5Q9UPZ3 1129 aa25.17■■□□□ 1.62
PDLIM4-206ENST00000474421 MYH2Q9UKX2 1941 aa25.17■■□□□ 1.62
PDLIM4-206ENST00000474421 SPDYE5A6NIY4 337 aa25.16■■□□□ 1.62
PDLIM4-206ENST00000474421 G3BP1Q13283 466 aaKnown RBP eCLIP25.16■■□□□ 1.62
PDLIM4-206ENST00000474421 RASGRF1Q13972 1273 aa25.16■■□□□ 1.62
PDLIM4-206ENST00000474421 FBXO46Q6PJ61 603 aaPredicted RBP25.16■■□□□ 1.62
PDLIM4-206ENST00000474421 ERO1BQ86YB8 467 aa25.16■■□□□ 1.62
PDLIM4-206ENST00000474421 DZIP1Q86YF9 867 aaKnown RBP25.16■■□□□ 1.62
PDLIM4-206ENST00000474421 TMEM57Q8N5G2 664 aa25.16■■□□□ 1.62
PDLIM4-206ENST00000474421 OTUD5Q96G74 571 aa25.16■■□□□ 1.62
PDLIM4-206ENST00000474421 PTPN18Q99952 460 aa25.16■■□□□ 1.62
PDLIM4-206ENST00000474421 USP40Q9NVE5 1235 aa25.16■■□□□ 1.62
PDLIM4-206ENST00000474421 CRHR2Q13324 411 aa25.15■■□□□ 1.62
PDLIM4-206ENST00000474421 FTSJ3Q8IY81 847 aaKnown RBP25.15■■□□□ 1.62
PDLIM4-206ENST00000474421 NEUROD6Q96NK8 337 aa25.15■■□□□ 1.62
PDLIM4-206ENST00000474421 CCL15-CCL14A0A0B4J2E2 113 aa25.14■■□□□ 1.62
PDLIM4-206ENST00000474421 CCL15Q16663 113 aa25.14■■□□□ 1.62
PDLIM4-206ENST00000474421 GORABQ5T7V8 394 aa25.14■■□□□ 1.62
PDLIM4-206ENST00000474421 CNKSR2Q8WXI2 1034 aa25.14■■□□□ 1.62
PDLIM4-206ENST00000474421 ERO1AQ96HE7 468 aa25.14■■□□□ 1.62
PDLIM4-206ENST00000474421 ABCF2Q9UG63 623 aa25.14■■□□□ 1.62
PDLIM4-206ENST00000474421 SNCAIPQ9Y6H5 919 aa25.14■■□□□ 1.62
PDLIM4-206ENST00000474421 PNMA6EA0A0J9YXQ4 647 aa25.13■■□□□ 1.61
PDLIM4-206ENST00000474421 WDHD1O75717 1129 aaPredicted RBP25.13■■□□□ 1.61
PDLIM4-206ENST00000474421 TCP10Q12799 353 aa25.13■■□□□ 1.61
PDLIM4-206ENST00000474421 BRI3BPQ8WY22 251 aa25.13■■□□□ 1.61
PDLIM4-206ENST00000474421 GAKO14976 1311 aa25.12■■□□□ 1.61
PDLIM4-206ENST00000474421 CETPP11597 493 aa25.12■■□□□ 1.61
PDLIM4-206ENST00000474421 NFIAQ12857 509 aa25.12■■□□□ 1.61
PDLIM4-206ENST00000474421 MIGA2Q7L4E1 593 aa25.12■■□□□ 1.61
PDLIM4-206ENST00000474421 ZKSCAN4Q969J2 545 aaPredicted RBP25.12■■□□□ 1.61
PDLIM4-206ENST00000474421 FAM163AQ96GL9 167 aaPredicted RBP25.12■■□□□ 1.61
PDLIM4-206ENST00000474421 PPIL2Q13356 520 aa25.11■■□□□ 1.61
PDLIM4-206ENST00000474421 SNAPC2Q13487 334 aa25.11■■□□□ 1.61
PDLIM4-206ENST00000474421 ERICH6Q7L0X2 663 aa25.11■■□□□ 1.61
PDLIM4-206ENST00000474421 ZFYVE28Q9HCC9 887 aa25.11■■□□□ 1.61
PDLIM4-206ENST00000474421 FAM198AQ9UFP1 575 aa25.11■■□□□ 1.61
PDLIM4-206ENST00000474421 ZBED9Q6R2W3 1325 aa25.11■■□□□ 1.61
PDLIM4-206ENST00000474421 SOX10P56693 466 aa25.1■■□□□ 1.61
PDLIM4-206ENST00000474421 SP3Q02447 781 aa25.1■■□□□ 1.61
PDLIM4-206ENST00000474421 PPATQ06203 517 aa25.1■■□□□ 1.61
PDLIM4-206ENST00000474421 IDI2Q9BXS1 227 aa25.1■■□□□ 1.61
PDLIM4-206ENST00000474421 ZCCHC17Q9NP64 241 aaKnown RBP25.1■■□□□ 1.61
PDLIM4-206ENST00000474421 ZNF112Q9UJU3 913 aa25.1■■□□□ 1.61
PDLIM4-206ENST00000474421 TRIM17Q9Y577 477 aa25.1■■□□□ 1.61
PDLIM4-206ENST00000474421 ENTPD3O75355 529 aa25.09■■□□□ 1.61
PDLIM4-206ENST00000474421 TAF1CQ15572 869 aaPredicted RBP25.09■■□□□ 1.61
PDLIM4-206ENST00000474421 UQCRFS1P1P0C7P4 283 aa25.08■■□□□ 1.61
PDLIM4-206ENST00000474421 ARID4AP29374 1257 aaPredicted RBP25.08■■□□□ 1.61
PDLIM4-206ENST00000474421 ATP8B2P98198 1209 aa25.08■■□□□ 1.61
PDLIM4-206ENST00000474421 POLA2Q14181 598 aa25.08■■□□□ 1.61
PDLIM4-206ENST00000474421 ARHGEF6Q15052 776 aa25.08■■□□□ 1.61
PDLIM4-206ENST00000474421 OTOP1Q7RTM1 612 aa25.08■■□□□ 1.61
PDLIM4-206ENST00000474421 ITPRIPQ8IWB1 547 aa25.08■■□□□ 1.61
PDLIM4-206ENST00000474421 SPATA5Q8NB90 893 aa25.08■■□□□ 1.61
PDLIM4-206ENST00000474421 SSH3Q8TE77 659 aa25.08■■□□□ 1.61
PDLIM4-206ENST00000474421 GPR108Q9NPR9 543 aa25.08■■□□□ 1.61
PDLIM4-206ENST00000474421 HMG20BQ9P0W2 317 aa25.08■■□□□ 1.61
PDLIM4-206ENST00000474421 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.08■■□□□ 1.61
PDLIM4-206ENST00000474421 IRF6O14896 467 aa25.07■■□□□ 1.6
PDLIM4-206ENST00000474421 INPP5BP32019 993 aa25.07■■□□□ 1.6
PDLIM4-206ENST00000474421 RGS3P49796 1198 aa25.07■■□□□ 1.6
PDLIM4-206ENST00000474421 GSTO1P78417 241 aa25.07■■□□□ 1.6
PDLIM4-206ENST00000474421 OS9Q13438 667 aaPredicted RBP25.07■■□□□ 1.6
PDLIM4-206ENST00000474421 MROH7-TTC4A0A0A0MT08 1334 aa25.07■■□□□ 1.6
PDLIM4-206ENST00000474421 LDHCP07864 332 aa25.06■■□□□ 1.6
PDLIM4-206ENST00000474421 BTDP43251 543 aa25.06■■□□□ 1.6
PDLIM4-206ENST00000474421 MECOMQ03112 1051 aa25.06■■□□□ 1.6
PDLIM4-206ENST00000474421 NOL9Q5SY16 702 aaKnown RBP25.06■■□□□ 1.6
PDLIM4-206ENST00000474421 FAM43AQ8N2R8 423 aa25.06■■□□□ 1.6
PDLIM4-206ENST00000474421 CD99L2Q8TCZ2 262 aa25.06■■□□□ 1.6
PDLIM4-206ENST00000474421 EFCC1Q9HA90 598 aa25.06■■□□□ 1.6
PDLIM4-206ENST00000474421 DOCK2Q92608 1830 aa25.06■■□□□ 1.6
PDLIM4-206ENST00000474421 MAP4K4O95819 1239 aaPredicted RBP25.05■■□□□ 1.6
PDLIM4-206ENST00000474421 ZSCAN29Q8IWY8 852 aaPredicted RBP25.05■■□□□ 1.6
PDLIM4-206ENST00000474421 RFX7Q2KHR2 1363 aa25.05■■□□□ 1.6
PDLIM4-206ENST00000474421 GPR75-ASB3A0A0A6YYF3 556 aa25.04■■□□□ 1.6
PDLIM4-206ENST00000474421 ZFPM1Q8IX07 1006 aa25.04■■□□□ 1.6
PDLIM4-206ENST00000474421 BTBD19C9JJ37 291 aa25.03■■□□□ 1.6
PDLIM4-206ENST00000474421 ZBTB7BO15156 539 aaPredicted RBP25.03■■□□□ 1.6
PDLIM4-206ENST00000474421 SURF6O75683 361 aaKnown RBP25.03■■□□□ 1.6
PDLIM4-206ENST00000474421 CCDC158Q5M9N0 1113 aa25.03■■□□□ 1.6
PDLIM4-206ENST00000474421 NPM3O75607 178 aaKnown RBP25.02■■□□□ 1.6
PDLIM4-206ENST00000474421 RLBP1P12271 317 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms