RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 NIM1KQ8IY84 436 aa24.29■■□□□ 1.48
CDHR3-210ENST00000474330 MYH2Q9UKX2 1941 aa24.29■■□□□ 1.48
CDHR3-210ENST00000474330 RPAP1Q9BWH6 1393 aaPredicted RBP24.29■■□□□ 1.48
CDHR3-210ENST00000474330 LDHCP07864 332 aa24.28■■□□□ 1.48
CDHR3-210ENST00000474330 CYP21A2P08686 494 aa24.28■■□□□ 1.48
CDHR3-210ENST00000474330 TM6SF1Q9BZW5 370 aa24.28■■□□□ 1.48
CDHR3-210ENST00000474330 ZNRF3Q9ULT6 936 aa24.28■■□□□ 1.48
CDHR3-210ENST00000474330 EIF6P56537 245 aaKnown RBP24.28■■□□□ 1.48
CDHR3-210ENST00000474330 FKBP1AP62942 108 aaKnown RBP24.28■■□□□ 1.48
CDHR3-210ENST00000474330 ALX1Q15699 326 aa24.28■■□□□ 1.48
CDHR3-210ENST00000474330 STRIP1Q5VSL9 837 aa24.28■■□□□ 1.48
CDHR3-210ENST00000474330 TBC1D2Q9BYX2 928 aa24.28■■□□□ 1.48
CDHR3-210ENST00000474330 FBXW7Q969H0 707 aa24.27■■□□□ 1.48
CDHR3-210ENST00000474330 ZMYM6O95789 1325 aa24.27■■□□□ 1.48
CDHR3-210ENST00000474330 YDJCA8MPS7 323 aa24.26■■□□□ 1.47
CDHR3-210ENST00000474330 GSG1L2A8MUP6 293 aa24.26■■□□□ 1.47
CDHR3-210ENST00000474330 APPP05067 770 aa24.26■■□□□ 1.47
CDHR3-210ENST00000474330 HSPA6P17066 643 aa24.26■■□□□ 1.47
CDHR3-210ENST00000474330 CXCL9Q07325 125 aa24.26■■□□□ 1.47
CDHR3-210ENST00000474330 KRT32Q14532 448 aa24.26■■□□□ 1.47
CDHR3-210ENST00000474330 ADCK5Q3MIX3 580 aa24.26■■□□□ 1.47
CDHR3-210ENST00000474330 CERS5Q8N5B7 392 aa24.26■■□□□ 1.47
CDHR3-210ENST00000474330 FAM163AQ96GL9 167 aaPredicted RBP24.26■■□□□ 1.47
CDHR3-210ENST00000474330 SLC4A4Q9Y6R1 1079 aa24.26■■□□□ 1.47
CDHR3-210ENST00000474330 ST18O60284 1047 aa24.25■■□□□ 1.47
CDHR3-210ENST00000474330 POTEIP0CG38 1075 aa24.25■■□□□ 1.47
CDHR3-210ENST00000474330 POTEJP0CG39 1038 aa24.25■■□□□ 1.47
CDHR3-210ENST00000474330 NEK4P51957 841 aa24.25■■□□□ 1.47
CDHR3-210ENST00000474330 DYNLL1P63167 89 aaKnown RBP24.25■■□□□ 1.47
CDHR3-210ENST00000474330 FSTL1Q12841 308 aa24.25■■□□□ 1.47
CDHR3-210ENST00000474330 SLF2Q8IX21 1173 aa24.25■■□□□ 1.47
CDHR3-210ENST00000474330 IFNL3Q8IZI9 196 aa24.25■■□□□ 1.47
CDHR3-210ENST00000474330 TAF1DQ9H5J8 278 aaPredicted RBP24.25■■□□□ 1.47
CDHR3-210ENST00000474330 KCNQ5Q9NR82 932 aa24.25■■□□□ 1.47
CDHR3-210ENST00000474330 GJA3Q9Y6H8 435 aa24.25■■□□□ 1.47
CDHR3-210ENST00000474330 USP17L3A6NCW0 530 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 USP17L4A6NCW7 530 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 PSMA5P28066 241 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 DIXDC1Q155Q3 683 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 IMMTQ16891 758 aaKnown RBP24.24■■□□□ 1.47
CDHR3-210ENST00000474330 USP17L1Q7RTZ2 530 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 JAKMIP1Q96N16 626 aaKnown RBP24.24■■□□□ 1.47
CDHR3-210ENST00000474330 ZSWIM6Q9HCJ5 1215 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 AATFQ9NY61 560 aaKnown RBP eCLIP24.24■■□□□ 1.47
CDHR3-210ENST00000474330 TAF6LQ9Y6J9 622 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 MROH7-TTC4A0A0A0MT08 1334 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 IQCA1LA6NCM1 817 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 PRKAB2O43741 272 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 PPP4CP60510 307 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 DACT2Q5SW24 774 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 HSCBQ8IWL3 235 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 NACAP1Q9BZK3 213 aa24.24■■□□□ 1.47
CDHR3-210ENST00000474330 EPB41L4AQ9HCS5 686 aaPredicted RBP24.24■■□□□ 1.47
CDHR3-210ENST00000474330 CD2BP2O95400 341 aaKnown RBP24.23■■□□□ 1.47
CDHR3-210ENST00000474330 SMC1BQ8NDV3 1235 aa24.23■■□□□ 1.47
CDHR3-210ENST00000474330 UPF3BQ9BZI7 483 aaKnown RBP24.23■■□□□ 1.47
CDHR3-210ENST00000474330 DAXXQ9UER7 740 aaPredicted RBP24.23■■□□□ 1.47
CDHR3-210ENST00000474330 LAMA4Q16363 1823 aa24.22■■□□□ 1.47
CDHR3-210ENST00000474330 BAG3O95817 575 aa24.22■■□□□ 1.47
CDHR3-210ENST00000474330 CASTP20810 708 aaKnown RBP24.22■■□□□ 1.47
CDHR3-210ENST00000474330 SCNN1DP51172 638 aa24.22■■□□□ 1.47
CDHR3-210ENST00000474330 CERS3Q8IU89 383 aa24.22■■□□□ 1.47
CDHR3-210ENST00000474330 NAPBQ9H115 298 aa24.22■■□□□ 1.47
CDHR3-210ENST00000474330 HACL1Q9UJ83 578 aa24.22■■□□□ 1.47
CDHR3-210ENST00000474330 GAKO14976 1311 aa24.22■■□□□ 1.47
CDHR3-210ENST00000474330 GPR75-ASB3A0A0A6YYF3 556 aa24.21■■□□□ 1.47
CDHR3-210ENST00000474330 ZNF213O14771 459 aa24.21■■□□□ 1.47
CDHR3-210ENST00000474330 NOL10Q9BSC4 688 aaKnown RBP24.21■■□□□ 1.47
CDHR3-210ENST00000474330 MXD3Q9BW11 206 aa24.21■■□□□ 1.47
CDHR3-210ENST00000474330 ADAMTSL1Q8N6G6 1762 aa24.21■■□□□ 1.47
CDHR3-210ENST00000474330 RAD17O75943 681 aa24.21■■□□□ 1.47
CDHR3-210ENST00000474330 GIMAP6Q6P9H5 292 aa24.21■■□□□ 1.47
CDHR3-210ENST00000474330 RUFY3Q7L099 469 aa24.21■■□□□ 1.47
CDHR3-210ENST00000474330 SDR42E1Q8WUS8 393 aa24.21■■□□□ 1.47
CDHR3-210ENST00000474330 CRNKL1Q9BZJ0 848 aaKnown RBP24.21■■□□□ 1.47
CDHR3-210ENST00000474330 TTF2Q9UNY4 1162 aaKnown RBP24.21■■□□□ 1.47
CDHR3-210ENST00000474330 EPHX2P34913 555 aa24.2■■□□□ 1.46
CDHR3-210ENST00000474330 NEK1Q96PY6 1258 aa24.2■■□□□ 1.46
CDHR3-210ENST00000474330 CYP46A1Q9Y6A2 500 aa24.2■■□□□ 1.46
CDHR3-210ENST00000474330 EPS15P42566 896 aa24.19■■□□□ 1.46
CDHR3-210ENST00000474330 SLC4A3P48751 1232 aa24.19■■□□□ 1.46
CDHR3-210ENST00000474330 MCM2P49736 904 aa24.19■■□□□ 1.46
CDHR3-210ENST00000474330 STOX1Q6ZVD7 989 aa24.19■■□□□ 1.46
CDHR3-210ENST00000474330 TTC14Q96N46 770 aa24.19■■□□□ 1.46
CDHR3-210ENST00000474330 MRIQ9BWK5 157 aa24.19■■□□□ 1.46
CDHR3-210ENST00000474330 MYO3BQ8WXR4 1341 aa24.18■■□□□ 1.46
CDHR3-210ENST00000474330 E7EWF7 191 aa24.18■■□□□ 1.46
CDHR3-210ENST00000474330 K7ELQ4 463 aaPredicted RBP24.18■■□□□ 1.46
CDHR3-210ENST00000474330 BTDP43251 543 aa24.18■■□□□ 1.46
CDHR3-210ENST00000474330 TDO2P48775 406 aa24.18■■□□□ 1.46
CDHR3-210ENST00000474330 HAND2P61296 217 aa24.18■■□□□ 1.46
CDHR3-210ENST00000474330 CIAPIN1Q6FI81 312 aa24.18■■□□□ 1.46
CDHR3-210ENST00000474330 BLOC1S2Q6QNY1 142 aa24.18■■□□□ 1.46
CDHR3-210ENST00000474330 ATP8A2Q9NTI2 1148 aa24.18■■□□□ 1.46
CDHR3-210ENST00000474330 F8W031 263 aaPredicted RBP24.17■■□□□ 1.46
CDHR3-210ENST00000474330 PSMD14O00487 310 aa24.17■■□□□ 1.46
CDHR3-210ENST00000474330 HHIPL2Q6UWX4 724 aa24.17■■□□□ 1.46
CDHR3-210ENST00000474330 BAZ2AQ9UIF9 1905 aaKnown RBP24.17■■□□□ 1.46
CDHR3-210ENST00000474330 VIL1P09327 827 aaKnown RBP24.17■■□□□ 1.46
CDHR3-210ENST00000474330 HMGB1P09429 215 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms