RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 BRMS1Q9HCU9 246 aa21.34■■□□□ 1.01
ECHDC1-214ENST00000474289 HPSEQ9Y251 543 aa21.34■■□□□ 1.01
ECHDC1-214ENST00000474289 CDC27P30260 824 aa21.34■■□□□ 1.01
ECHDC1-214ENST00000474289 GUCY2CP25092 1073 aa21.33■■□□□ 1.01
ECHDC1-214ENST00000474289 PDE4BQ07343 736 aa21.33■■□□□ 1.01
ECHDC1-214ENST00000474289 SLC39A14Q15043 492 aa21.33■■□□□ 1.01
ECHDC1-214ENST00000474289 AKAP4Q5JQC9 854 aa21.33■■□□□ 1.01
ECHDC1-214ENST00000474289 TBX22Q9Y458 520 aa21.33■■□□□ 1.01
ECHDC1-214ENST00000474289 POTEB2H3BUK9 544 aa21.33■■□□□ 1
ECHDC1-214ENST00000474289 ERLIN1O75477 346 aa21.33■■□□□ 1
ECHDC1-214ENST00000474289 KIF23Q02241 960 aaPredicted RBP21.33■■□□□ 1
ECHDC1-214ENST00000474289 SHC4Q6S5L8 630 aa21.33■■□□□ 1
ECHDC1-214ENST00000474289 MKRN1Q9UHC7 482 aaKnown RBP21.33■■□□□ 1
ECHDC1-214ENST00000474289 ANKARQ7Z5J8 1434 aa21.32■■□□□ 1
ECHDC1-214ENST00000474289 BMP6P22004 513 aa21.32■■□□□ 1
ECHDC1-214ENST00000474289 CORO7P57737 925 aa21.32■■□□□ 1
ECHDC1-214ENST00000474289 LRRC31Q6UY01 552 aa21.32■■□□□ 1
ECHDC1-214ENST00000474289 METTL16Q86W50 562 aaKnown RBP21.32■■□□□ 1
ECHDC1-214ENST00000474289 FOXP4Q8IVH2 680 aaPredicted RBP21.32■■□□□ 1
ECHDC1-214ENST00000474289 CEP112Q8N8E3 955 aa21.32■■□□□ 1
ECHDC1-214ENST00000474289 LZTFL1Q9NQ48 299 aa21.32■■□□□ 1
ECHDC1-214ENST00000474289 COPRSQ9NQ92 184 aa21.32■■□□□ 1
ECHDC1-214ENST00000474289 CDC23Q9UJX2 597 aa21.32■■□□□ 1
ECHDC1-214ENST00000474289 RGPD2P0DJD1 1756 aa21.32■■□□□ 1
ECHDC1-214ENST00000474289 ANKRD65E5RJM6 399 aa21.31■■□□□ 1
ECHDC1-214ENST00000474289 CCDC175P0C221 793 aa21.31■■□□□ 1
ECHDC1-214ENST00000474289 HSPD1P10809 573 aaKnown RBP21.31■■□□□ 1
ECHDC1-214ENST00000474289 PPM1EQ8WY54 764 aa21.31■■□□□ 1
ECHDC1-214ENST00000474289 PXDNQ92626 1479 aa21.31■■□□□ 1
ECHDC1-214ENST00000474289 PHACTR2O75167 634 aa21.3■■□□□ 1
ECHDC1-214ENST00000474289 DDX58O95786 925 aaKnown RBP21.3■■□□□ 1
ECHDC1-214ENST00000474289 PTPN12Q05209 780 aaKnown RBP21.3■■□□□ 1
ECHDC1-214ENST00000474289 CASP8Q14790 479 aa21.3■■□□□ 1
ECHDC1-214ENST00000474289 A0A0U1RQJ8 604 aa21.3■■□□□ 1
ECHDC1-214ENST00000474289 SOWAHDA6NJG2 315 aa21.3■■□□□ 1
ECHDC1-214ENST00000474289 RNMTO43148 476 aaKnown RBP21.3■■□□□ 1
ECHDC1-214ENST00000474289 CNNM3Q8NE01 707 aa21.3■■□□□ 1
ECHDC1-214ENST00000474289 FAM71BQ8TC56 605 aa21.3■■□□□ 1
ECHDC1-214ENST00000474289 ATRIPQ8WXE1 791 aa21.3■■□□□ 1
ECHDC1-214ENST00000474289 CCDC102AQ96A19 550 aa21.3■■□□□ 1
ECHDC1-214ENST00000474289 HELLSQ9NRZ9 838 aa21.3■■□□□ 1
ECHDC1-214ENST00000474289 CCDC9Q9Y3X0 531 aaKnown RBP21.3■■□□□ 1
ECHDC1-214ENST00000474289 PCDHA5Q9Y5H7 936 aa21.3■■□□□ 1
ECHDC1-214ENST00000474289 KCNA6P17658 529 aa21.29■■□□□ 1
ECHDC1-214ENST00000474289 VSNL1P62760 191 aa21.29■■□□□ 1
ECHDC1-214ENST00000474289 FBXL16Q8N461 479 aa21.29■■□□□ 1
ECHDC1-214ENST00000474289 TOMM22Q9NS69 142 aa21.29■■□□□ 1
ECHDC1-214ENST00000474289 USP54Q70EL1 1684 aa21.29■■□□□ 1
ECHDC1-214ENST00000474289 PALLDQ8WX93 1383 aa21.29■■□□□ 1
ECHDC1-214ENST00000474289 RFX5P48382 616 aaPredicted RBP21.29■■□□□ 1
ECHDC1-214ENST00000474289 HSP90B2PQ58FF3 399 aa21.29■■□□□ 1
ECHDC1-214ENST00000474289 DRC1Q96MC2 740 aa21.29■■□□□ 1
ECHDC1-214ENST00000474289 LMO7Q8WWI1 1683 aa21.29■■□□□ 1
ECHDC1-214ENST00000474289 NEURL1BA8MQ27 555 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 TFRCP02786 760 aaKnown RBP21.28■■□□□ 1
ECHDC1-214ENST00000474289 RHOXF2BP0C7M4 288 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 ZNF18P17022 549 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 LONRF3Q496Y0 759 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 TTLL5Q6EMB2 1281 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 RAB11FIP4Q86YS3 637 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 RHOXF2Q9BQY4 288 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 HPS5Q9UPZ3 1129 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 HEG1Q9ULI3 1381 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 GOLIM4O00461 696 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 ATP2B1P20020 1258 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 RIC3Q7Z5B4 369 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 NFE2L3Q9Y4A8 694 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 ADGRG1Q9Y653 693 aa21.28■■□□□ 1
ECHDC1-214ENST00000474289 FAM237AA0A1B0GTK4 181 aa21.27■■□□□ 1
ECHDC1-214ENST00000474289 GOLGA8BA8MQT2 603 aa21.27■■□□□ 1
ECHDC1-214ENST00000474289 GCKRQ14397 625 aa21.27■■□□□ 1
ECHDC1-214ENST00000474289 CLIC6Q96NY7 704 aa21.27■■□□□ 1
ECHDC1-214ENST00000474289 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.27■■□□□ 1
ECHDC1-214ENST00000474289 PLEKHA4Q9H4M7 779 aa21.27■■□□□ 1
ECHDC1-214ENST00000474289 FAM204AQ9H8W3 233 aa21.27■■□□□ 1
ECHDC1-214ENST00000474289 KIF5CO60282 957 aa21.27■■□□□ 1
ECHDC1-214ENST00000474289 PPP6R2O75170 966 aa21.27■■□□□ 1
ECHDC1-214ENST00000474289 FMR1Q06787 632 aaKnown RBP eCLIP21.27■■□□□ 1
ECHDC1-214ENST00000474289 PLEKHO1Q53GL0 409 aaPredicted RBP21.27■■□□□ 1
ECHDC1-214ENST00000474289 ZMYM1Q5SVZ6 1142 aa21.27■■□□□ 1
ECHDC1-214ENST00000474289 RESP18Q5W5W9 173 aa21.27■■□□□ 1
ECHDC1-214ENST00000474289 LOC102724159A0A0B4J2E5 919 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 KLF18A0A0U1RQI7 1052 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 PTPAQ15257 358 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 PWP2Q15269 919 aaKnown RBP21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 RAD9BQ6WBX8 426 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 NCAPGQ9BPX3 1015 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 DDX21Q9NR30 783 aaKnown RBP eCLIP21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 RAI14Q9P0K7 980 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 MAST3O60307 1309 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 LRRIQ3A6PVS8 624 aaPredicted RBP21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 CPLX1O14810 134 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 FOXN1O15353 648 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 C1orf141Q5JVX7 400 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 CCDC102BQ68D86 513 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 JMYQ8N9B5 988 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 TEX13AQ9BXU3 409 aaPredicted RBP21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 PAG1Q9NWQ8 432 aa21.26■□□□□ 0.99
ECHDC1-214ENST00000474289 PDIA6Q15084 440 aa21.25■□□□□ 0.99
ECHDC1-214ENST00000474289 KIF4BQ2VIQ3 1234 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms