RNA–Protein interactions for RNA: ENST00000474178.1

RAB3GAP2-204, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 4

Gene RAB3GAP2, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-204ENST00000474178 TNNI2P48788 182 aa12.72□□□□□ -0.37
RAB3GAP2-204ENST00000474178 UBXN2AP68543 259 aa12.72□□□□□ -0.37
RAB3GAP2-204ENST00000474178 RALBP1Q15311 655 aa12.72□□□□□ -0.37
RAB3GAP2-204ENST00000474178 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
RAB3GAP2-204ENST00000474178 BIN2Q9UBW5 565 aaPredicted RBP12.72□□□□□ -0.37
RAB3GAP2-204ENST00000474178 AK9Q5TCS8 1911 aa12.72□□□□□ -0.37
RAB3GAP2-204ENST00000474178 PHIPQ8WWQ0 1821 aa12.72□□□□□ -0.37
RAB3GAP2-204ENST00000474178 ELNP15502 786 aa12.71□□□□□ -0.37
RAB3GAP2-204ENST00000474178 BCAMP50895 628 aa12.71□□□□□ -0.37
RAB3GAP2-204ENST00000474178 PPATQ06203 517 aa12.71□□□□□ -0.37
RAB3GAP2-204ENST00000474178 GPAT2Q6NUI2 795 aa12.71□□□□□ -0.37
RAB3GAP2-204ENST00000474178 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
RAB3GAP2-204ENST00000474178 MIGA2Q7L4E1 593 aa12.71□□□□□ -0.37
RAB3GAP2-204ENST00000474178 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
RAB3GAP2-204ENST00000474178 PAWRQ96IZ0 340 aaKnown RBP12.71□□□□□ -0.37
RAB3GAP2-204ENST00000474178 FAM84BQ96KN1 310 aaPredicted RBP12.71□□□□□ -0.37
RAB3GAP2-204ENST00000474178 KCNH4Q9UQ05 1017 aa12.71□□□□□ -0.37
RAB3GAP2-204ENST00000474178 CUL9Q8IWT3 2517 aa12.71□□□□□ -0.37
RAB3GAP2-204ENST00000474178 CACNA1FO60840 1977 aa12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 MYBBP1AQ9BQG0 1328 aaKnown RBP12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 APAF1O14727 1248 aa12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 ADCY3O60266 1144 aa12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 INHAP05111 366 aa12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 CYP2C8P10632 490 aa12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 IFIT5Q13325 482 aaKnown RBP12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 MKRN4PQ13434 485 aaPredicted RBP12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 DEFB118Q96PH6 123 aa12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 CRISPLD2Q9H0B8 497 aa12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 PAK6Q9NQU5 681 aaPredicted RBP12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 ZMYND8Q9ULU4 1186 aaPredicted RBP12.7□□□□□ -0.38
RAB3GAP2-204ENST00000474178 MYH13Q9UKX3 1938 aa12.69□□□□□ -0.38
RAB3GAP2-204ENST00000474178 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
RAB3GAP2-204ENST00000474178 TFRCP02786 760 aaKnown RBP12.69□□□□□ -0.38
RAB3GAP2-204ENST00000474178 FLT3LGP49771 235 aa12.69□□□□□ -0.38
RAB3GAP2-204ENST00000474178 FCGRTP55899 365 aa12.69□□□□□ -0.38
RAB3GAP2-204ENST00000474178 WDR43Q15061 677 aaKnown RBP eCLIP12.69□□□□□ -0.38
RAB3GAP2-204ENST00000474178 C7orf61Q8IZ16 206 aa12.69□□□□□ -0.38
RAB3GAP2-204ENST00000474178 IQSEC3Q9UPP2 1182 aaPredicted RBP12.69□□□□□ -0.38
RAB3GAP2-204ENST00000474178 CHMP3Q9Y3E7 222 aa12.69□□□□□ -0.38
RAB3GAP2-204ENST00000474178 PLXNB2O15031 1838 aa12.69□□□□□ -0.38
RAB3GAP2-204ENST00000474178 RPAP1Q9BWH6 1393 aaPredicted RBP12.69□□□□□ -0.38
RAB3GAP2-204ENST00000474178 DOCK2Q92608 1830 aa12.68□□□□□ -0.38
RAB3GAP2-204ENST00000474178 SYN1P17600 705 aa12.68□□□□□ -0.38
RAB3GAP2-204ENST00000474178 HIBADHP31937 336 aaKnown RBP12.68□□□□□ -0.38
RAB3GAP2-204ENST00000474178 LRIT3Q3SXY7 679 aa12.68□□□□□ -0.38
RAB3GAP2-204ENST00000474178 APOBEC3HQ6NTF7 200 aaKnown RBP12.68□□□□□ -0.38
RAB3GAP2-204ENST00000474178 LMBR1LQ6UX01 489 aa12.68□□□□□ -0.38
RAB3GAP2-204ENST00000474178 LDHAL6AQ6ZMR3 332 aa12.68□□□□□ -0.38
RAB3GAP2-204ENST00000474178 FAM83AQ86UY5 434 aa12.68□□□□□ -0.38
RAB3GAP2-204ENST00000474178 LINS1Q8NG48 757 aa12.68□□□□□ -0.38
RAB3GAP2-204ENST00000474178 DNAAF4Q8WXU2 420 aa12.68□□□□□ -0.38
RAB3GAP2-204ENST00000474178 PUS3Q9BZE2 481 aaKnown RBP12.68□□□□□ -0.38
RAB3GAP2-204ENST00000474178 ZNF112Q9UJU3 913 aa12.68□□□□□ -0.38
RAB3GAP2-204ENST00000474178 MAGEA10P43363 369 aaPredicted RBP12.67□□□□□ -0.38
RAB3GAP2-204ENST00000474178 HDLBPQ00341 1268 aaKnown RBP12.67□□□□□ -0.38
RAB3GAP2-204ENST00000474178 FLIIQ13045 1269 aa12.67□□□□□ -0.38
RAB3GAP2-204ENST00000474178 UBE4AQ14139 1066 aa12.67□□□□□ -0.38
RAB3GAP2-204ENST00000474178 ZDHHC15Q96MV8 337 aa12.67□□□□□ -0.38
RAB3GAP2-204ENST00000474178 STK31Q9BXU1 1019 aa12.67□□□□□ -0.38
RAB3GAP2-204ENST00000474178 ZNF341Q9BYN7 854 aa12.67□□□□□ -0.38
RAB3GAP2-204ENST00000474178 MYH16Q9H6N6 1097 aa12.67□□□□□ -0.38
RAB3GAP2-204ENST00000474178 CHAF1AQ13111 956 aaPredicted RBP12.66□□□□□ -0.38
RAB3GAP2-204ENST00000474178 DCAF15Q66K64 600 aa12.66□□□□□ -0.38
RAB3GAP2-204ENST00000474178 FBXO33Q7Z6M2 555 aa12.66□□□□□ -0.38
RAB3GAP2-204ENST00000474178 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.66□□□□□ -0.38
RAB3GAP2-204ENST00000474178 PXYLP1Q8TE99 480 aa12.66□□□□□ -0.38
RAB3GAP2-204ENST00000474178 TEKT1Q969V4 418 aa12.66□□□□□ -0.38
RAB3GAP2-204ENST00000474178 PARK7Q99497 189 aaKnown RBP12.66□□□□□ -0.38
RAB3GAP2-204ENST00000474178 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
RAB3GAP2-204ENST00000474178 SPINK5Q9NQ38 1064 aaPredicted RBP12.66□□□□□ -0.38
RAB3GAP2-204ENST00000474178 CNNM1Q9NRU3 951 aa12.66□□□□□ -0.38
RAB3GAP2-204ENST00000474178 SPTBN5Q9NRC6 3674 aaKnown RBP12.65□□□□□ -0.38
RAB3GAP2-204ENST00000474178 CALD1Q05682 793 aaKnown RBP12.65□□□□□ -0.38
RAB3GAP2-204ENST00000474178 IRF5Q13568 498 aa12.65□□□□□ -0.38
RAB3GAP2-204ENST00000474178 TWISTNBQ3B726 338 aaPredicted RBP12.65□□□□□ -0.38
RAB3GAP2-204ENST00000474178 NOL9Q5SY16 702 aaKnown RBP12.65□□□□□ -0.38
RAB3GAP2-204ENST00000474178 FKBP1CQ5VVH2 108 aa12.65□□□□□ -0.38
RAB3GAP2-204ENST00000474178 NECAB2Q7Z6G3 386 aa12.65□□□□□ -0.38
RAB3GAP2-204ENST00000474178 TDHQ8IZJ6 230 aa12.65□□□□□ -0.38
RAB3GAP2-204ENST00000474178 GUCD1Q96NT3 240 aa12.65□□□□□ -0.38
RAB3GAP2-204ENST00000474178 DOCK1Q14185 1865 aa12.65□□□□□ -0.38
RAB3GAP2-204ENST00000474178 VCANP13611 3396 aa12.64□□□□□ -0.39
RAB3GAP2-204ENST00000474178 F6X3S4 739 aa12.64□□□□□ -0.39
RAB3GAP2-204ENST00000474178 TRIM32Q13049 653 aa12.64□□□□□ -0.39
RAB3GAP2-204ENST00000474178 FKBP5Q13451 457 aaPredicted RBP12.64□□□□□ -0.39
RAB3GAP2-204ENST00000474178 CCDC57Q2TAC2 916 aa12.64□□□□□ -0.39
RAB3GAP2-204ENST00000474178 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.64□□□□□ -0.39
RAB3GAP2-204ENST00000474178 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
RAB3GAP2-204ENST00000474178 COL2A1P02458 1487 aaPredicted RBP12.64□□□□□ -0.39
RAB3GAP2-204ENST00000474178 FRMPD3Q5JV73 1810 aa12.63□□□□□ -0.39
RAB3GAP2-204ENST00000474178 TNPO2O14787 897 aaKnown RBP12.63□□□□□ -0.39
RAB3GAP2-204ENST00000474178 SLURP2P0DP57 97 aa12.63□□□□□ -0.39
RAB3GAP2-204ENST00000474178 TCP10Q12799 353 aa12.63□□□□□ -0.39
RAB3GAP2-204ENST00000474178 NFIAQ12857 509 aa12.63□□□□□ -0.39
RAB3GAP2-204ENST00000474178 TAF7LQ5H9L4 462 aa12.63□□□□□ -0.39
RAB3GAP2-204ENST00000474178 BEND3Q5T5X7 828 aa12.63□□□□□ -0.39
RAB3GAP2-204ENST00000474178 FAM151AQ8WW52 585 aa12.63□□□□□ -0.39
RAB3GAP2-204ENST00000474178 HOOK2Q96ED9 719 aa12.63□□□□□ -0.39
RAB3GAP2-204ENST00000474178 MRIQ9BWK5 157 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms