RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 VPS37CA5D8V6 355 aaPredicted RBP21.25■□□□□ 0.99
VARS2-206ENST00000473916 PRPF40AO75400 957 aaKnown RBP21.25■□□□□ 0.99
VARS2-206ENST00000473916 ATP2B4P23634 1241 aa21.25■□□□□ 0.99
VARS2-206ENST00000473916 ZNF804AQ7Z570 1209 aa21.25■□□□□ 0.99
VARS2-206ENST00000473916 SENP2Q9HC62 589 aa21.25■□□□□ 0.99
VARS2-206ENST00000473916 AATFQ9NY61 560 aaKnown RBP eCLIP21.25■□□□□ 0.99
VARS2-206ENST00000473916 DUOX1Q9NRD9 1551 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 F13A1P00488 732 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 C15orf52Q6ZUT6 534 aaKnown RBP21.24■□□□□ 0.99
VARS2-206ENST00000473916 CDC37L1Q7L3B6 337 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 GDPD2Q9HCC8 539 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 PODXL2Q9NZ53 605 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 KIAA1551Q9HCM1 1747 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 CYP2D7A0A087X1C5 515 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 EVX2Q03828 476 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 TRDNQ13061 729 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 LARP1BQ659C4 914 aaKnown RBP21.24■□□□□ 0.99
VARS2-206ENST00000473916 DEFB132Q7Z7B7 95 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 FBXL16Q8N461 479 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 NACAP1Q9BZK3 213 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 CD209Q9NNX6 404 aa21.24■□□□□ 0.99
VARS2-206ENST00000473916 C6orf229H3BNL8 230 aa21.23■□□□□ 0.99
VARS2-206ENST00000473916 NSUN7Q8NE18 718 aaKnown RBP21.23■□□□□ 0.99
VARS2-206ENST00000473916 MYH2Q9UKX2 1941 aa21.23■□□□□ 0.99
VARS2-206ENST00000473916 KLF18A0A0U1RQI7 1052 aa21.22■□□□□ 0.99
VARS2-206ENST00000473916 ATP6V0A2Q9Y487 856 aa21.22■□□□□ 0.99
VARS2-206ENST00000473916 NPR1P16066 1061 aa21.22■□□□□ 0.99
VARS2-206ENST00000473916 EVCP57679 992 aa21.22■□□□□ 0.99
VARS2-206ENST00000473916 AKNAD1Q5T1N1 836 aa21.22■□□□□ 0.99
VARS2-206ENST00000473916 DZIP1Q86YF9 867 aaKnown RBP21.22■□□□□ 0.99
VARS2-206ENST00000473916 SP8Q8IXZ3 490 aa21.22■□□□□ 0.99
VARS2-206ENST00000473916 ZNF274Q96GC6 653 aaPredicted RBP21.22■□□□□ 0.99
VARS2-206ENST00000473916 HPS5Q9UPZ3 1129 aa21.22■□□□□ 0.99
VARS2-206ENST00000473916 MINDY4BA8MYZ0 360 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 KDM4AO75164 1064 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 PPARAQ07869 468 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 DIXDC1Q155Q3 683 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 RRP12Q5JTH9 1297 aaKnown RBP21.21■□□□□ 0.99
VARS2-206ENST00000473916 FERMT3Q86UX7 667 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 QSER1Q2KHR3 1735 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 PTPDC1A2A3K4 754 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 RIMBP2O15034 1052 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 PDE6BP35913 854 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 FOSBP53539 338 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 SMARCC2Q8TAQ2 1214 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 STK32BQ9NY57 414 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 ZSWIM5Q9P217 1185 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 CNPY2Q9Y2B0 182 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 WDR19Q8NEZ3 1342 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 SALL1Q9NSC2 1324 aa21.21■□□□□ 0.99
VARS2-206ENST00000473916 GOLGA8BA8MQT2 603 aa21.2■□□□□ 0.98
VARS2-206ENST00000473916 SH2B2O14492 632 aaPredicted RBP21.2■□□□□ 0.98
VARS2-206ENST00000473916 LDHBP07195 334 aaKnown RBP21.2■□□□□ 0.98
VARS2-206ENST00000473916 WDR66Q8TBY9 1149 aa21.2■□□□□ 0.98
VARS2-206ENST00000473916 STAG1Q8WVM7 1258 aa21.2■□□□□ 0.98
VARS2-206ENST00000473916 DDX49Q9Y6V7 483 aaKnown RBP21.2■□□□□ 0.98
VARS2-206ENST00000473916 LAMB1P07942 1786 aa21.2■□□□□ 0.98
VARS2-206ENST00000473916 SLX4Q8IY92 1834 aa21.2■□□□□ 0.98
VARS2-206ENST00000473916 ZBTB22O15209 634 aa21.19■□□□□ 0.98
VARS2-206ENST00000473916 IL1R1P14778 569 aa21.19■□□□□ 0.98
VARS2-206ENST00000473916 MFSD6Q6ZSS7 791 aa21.19■□□□□ 0.98
VARS2-206ENST00000473916 GPT2Q8TD30 523 aa21.19■□□□□ 0.98
VARS2-206ENST00000473916 TOMM22Q9NS69 142 aa21.19■□□□□ 0.98
VARS2-206ENST00000473916 PTMSP20962 102 aa21.19■□□□□ 0.98
VARS2-206ENST00000473916 IGDCC4Q8TDY8 1250 aa21.19■□□□□ 0.98
VARS2-206ENST00000473916 ZNF622Q969S3 477 aaKnown RBP eCLIP21.19■□□□□ 0.98
VARS2-206ENST00000473916 ZKSCAN3Q9BRR0 538 aa21.19■□□□□ 0.98
VARS2-206ENST00000473916 ANGEL1Q9UNK9 670 aaKnown RBP21.19■□□□□ 0.98
VARS2-206ENST00000473916 RXRAP19793 462 aa21.18■□□□□ 0.98
VARS2-206ENST00000473916 SPTY2D1Q68D10 685 aaPredicted RBP21.18■□□□□ 0.98
VARS2-206ENST00000473916 MASTLQ96GX5 879 aa21.18■□□□□ 0.98
VARS2-206ENST00000473916 CDK5RAP2Q96SN8 1893 aa21.18■□□□□ 0.98
VARS2-206ENST00000473916 CHRNA5P30532 468 aa21.17■□□□□ 0.98
VARS2-206ENST00000473916 SKOR2Q2VWA4 1001 aaPredicted RBP21.17■□□□□ 0.98
VARS2-206ENST00000473916 FAM173BQ6P4H8 233 aa21.17■□□□□ 0.98
VARS2-206ENST00000473916 CTR9Q6PD62 1173 aa21.17■□□□□ 0.98
VARS2-206ENST00000473916 C2CD5Q86YS7 1000 aa21.17■□□□□ 0.98
VARS2-206ENST00000473916 LLPHQ9BRT6 129 aaKnown RBP21.17■□□□□ 0.98
VARS2-206ENST00000473916 LY9Q9HBG7 655 aa21.17■□□□□ 0.98
VARS2-206ENST00000473916 DNM1Q05193 864 aaKnown RBP21.17■□□□□ 0.98
VARS2-206ENST00000473916 KLHL40Q2TBA0 621 aa21.17■□□□□ 0.98
VARS2-206ENST00000473916 SLC4A8Q2Y0W8 1093 aa21.17■□□□□ 0.98
VARS2-206ENST00000473916 TMC4Q7Z404 712 aa21.17■□□□□ 0.98
VARS2-206ENST00000473916 MYL10Q9BUA6 226 aa21.17■□□□□ 0.98
VARS2-206ENST00000473916 CYP2D6P10635 497 aa21.16■□□□□ 0.98
VARS2-206ENST00000473916 NCLP19338 710 aaKnown RBP21.16■□□□□ 0.98
VARS2-206ENST00000473916 PDCP20941 246 aa21.16■□□□□ 0.98
VARS2-206ENST00000473916 DCP1AQ9NPI6 582 aaPredicted RBP21.16■□□□□ 0.98
VARS2-206ENST00000473916 USP17L12C9JPN9 530 aa21.16■□□□□ 0.98
VARS2-206ENST00000473916 USP17L21D6R901 530 aa21.16■□□□□ 0.98
VARS2-206ENST00000473916 GADD45BO75293 160 aaPredicted RBP21.16■□□□□ 0.98
VARS2-206ENST00000473916 TMEM67Q5HYA8 995 aa21.16■□□□□ 0.98
VARS2-206ENST00000473916 USP48Q86UV5 1035 aa21.16■□□□□ 0.98
VARS2-206ENST00000473916 MPNDQ8N594 471 aa21.16■□□□□ 0.98
VARS2-206ENST00000473916 SH3RF3Q8TEJ3 882 aaPredicted RBP21.16■□□□□ 0.98
VARS2-206ENST00000473916 KRT23Q9C075 422 aa21.16■□□□□ 0.98
VARS2-206ENST00000473916 CNNM2Q9H8M5 875 aa21.16■□□□□ 0.98
VARS2-206ENST00000473916 ECM29Q5VYK3 1845 aa21.15■□□□□ 0.98
VARS2-206ENST00000473916 PRDM1O75626 825 aa21.15■□□□□ 0.98
VARS2-206ENST00000473916 FDPSP14324 419 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms