RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 DNAAF4Q8WXU2 420 aa20.66■□□□□ 0.9
HPS4-210ENST00000473782 COL25A1Q9BXS0 654 aaPredicted RBP20.66■□□□□ 0.9
HPS4-210ENST00000473782 STK31Q9BXU1 1019 aa20.66■□□□□ 0.9
HPS4-210ENST00000473782 MYH16Q9H6N6 1097 aa20.66■□□□□ 0.9
HPS4-210ENST00000473782 BIN2Q9UBW5 565 aaPredicted RBP20.66■□□□□ 0.9
HPS4-210ENST00000473782 ZNF112Q9UJU3 913 aa20.66■□□□□ 0.9
HPS4-210ENST00000473782 ALPK3Q96L96 1907 aa20.66■□□□□ 0.9
HPS4-210ENST00000473782 HDLBPQ00341 1268 aaKnown RBP20.65■□□□□ 0.9
HPS4-210ENST00000473782 UBE4AQ14139 1066 aa20.65■□□□□ 0.9
HPS4-210ENST00000473782 LMBR1LQ6UX01 489 aa20.65■□□□□ 0.9
HPS4-210ENST00000473782 LDHAL6AQ6ZMR3 332 aa20.65■□□□□ 0.9
HPS4-210ENST00000473782 MIGA2Q7L4E1 593 aa20.65■□□□□ 0.9
HPS4-210ENST00000473782 CRISPLD2Q9H0B8 497 aa20.65■□□□□ 0.9
HPS4-210ENST00000473782 STXBP5LQ9Y2K9 1186 aa20.65■□□□□ 0.9
HPS4-210ENST00000473782 CYP2C8P10632 490 aa20.64■□□□□ 0.89
HPS4-210ENST00000473782 FBXO33Q7Z6M2 555 aa20.64■□□□□ 0.89
HPS4-210ENST00000473782 ZDHHC15Q96MV8 337 aa20.64■□□□□ 0.89
HPS4-210ENST00000473782 PAK6Q9NQU5 681 aaPredicted RBP20.64■□□□□ 0.89
HPS4-210ENST00000473782 MTMR10Q9NXD2 777 aa20.64■□□□□ 0.89
HPS4-210ENST00000473782 CHMP3Q9Y3E7 222 aa20.64■□□□□ 0.89
HPS4-210ENST00000473782 ELNP15502 786 aa20.63■□□□□ 0.89
HPS4-210ENST00000473782 FCGRTP55899 365 aa20.63■□□□□ 0.89
HPS4-210ENST00000473782 FKBP1CQ5VVH2 108 aa20.63■□□□□ 0.89
HPS4-210ENST00000473782 DIS3LQ8TF46 1054 aaKnown RBP20.63■□□□□ 0.89
HPS4-210ENST00000473782 MRIQ9BWK5 157 aa20.63■□□□□ 0.89
HPS4-210ENST00000473782 PUS3Q9BZE2 481 aaKnown RBP20.63■□□□□ 0.89
HPS4-210ENST00000473782 RPAP1Q9BWH6 1393 aaPredicted RBP20.62■□□□□ 0.89
HPS4-210ENST00000473782 ADCY3O60266 1144 aa20.62■□□□□ 0.89
HPS4-210ENST00000473782 INHAP05111 366 aa20.62■□□□□ 0.89
HPS4-210ENST00000473782 PAWRQ96IZ0 340 aaKnown RBP20.62■□□□□ 0.89
HPS4-210ENST00000473782 DEFB118Q96PH6 123 aa20.62■□□□□ 0.89
HPS4-210ENST00000473782 ZNF341Q9BYN7 854 aa20.62■□□□□ 0.89
HPS4-210ENST00000473782 IQSEC3Q9UPP2 1182 aaPredicted RBP20.62■□□□□ 0.89
HPS4-210ENST00000473782 TFRCP02786 760 aaKnown RBP20.61■□□□□ 0.89
HPS4-210ENST00000473782 FLT3LGP49771 235 aa20.61■□□□□ 0.89
HPS4-210ENST00000473782 TWISTNBQ3B726 338 aaPredicted RBP20.61■□□□□ 0.89
HPS4-210ENST00000473782 LRIT3Q3SXY7 679 aa20.61■□□□□ 0.89
HPS4-210ENST00000473782 BEND3Q5T5X7 828 aa20.61■□□□□ 0.89
HPS4-210ENST00000473782 TEKT1Q969V4 418 aa20.61■□□□□ 0.89
HPS4-210ENST00000473782 CNNM1Q9NRU3 951 aa20.61■□□□□ 0.89
HPS4-210ENST00000473782 BCAMP50895 628 aa20.6■□□□□ 0.89
HPS4-210ENST00000473782 FKBP5Q13451 457 aaPredicted RBP20.6■□□□□ 0.89
HPS4-210ENST00000473782 DCAF15Q66K64 600 aa20.6■□□□□ 0.89
HPS4-210ENST00000473782 PXYLP1Q8TE99 480 aa20.6■□□□□ 0.89
HPS4-210ENST00000473782 MGAMO43451 1857 aa20.6■□□□□ 0.89
HPS4-210ENST00000473782 IRF5Q13568 498 aa20.59■□□□□ 0.89
HPS4-210ENST00000473782 CCDC57Q2TAC2 916 aa20.59■□□□□ 0.89
HPS4-210ENST00000473782 NOL9Q5SY16 702 aaKnown RBP20.59■□□□□ 0.89
HPS4-210ENST00000473782 PARK7Q99497 189 aaKnown RBP20.59■□□□□ 0.89
HPS4-210ENST00000473782 ZMYND8Q9ULU4 1186 aaPredicted RBP20.59■□□□□ 0.89
HPS4-210ENST00000473782 LAMA2P24043 3122 aaKnown RBP20.59■□□□□ 0.89
HPS4-210ENST00000473782 EYSQ5T1H1 3165 aa20.58■□□□□ 0.89
HPS4-210ENST00000473782 CHAF1AQ13111 956 aaPredicted RBP20.58■□□□□ 0.89
HPS4-210ENST00000473782 HOOK2Q96ED9 719 aa20.58■□□□□ 0.89
HPS4-210ENST00000473782 F6X3S4 739 aa20.57■□□□□ 0.88
HPS4-210ENST00000473782 CAPN2P17655 700 aa20.57■□□□□ 0.88
HPS4-210ENST00000473782 KAZALD1Q96I82 304 aa20.57■□□□□ 0.88
HPS4-210ENST00000473782 CXCL11O14625 94 aa20.56■□□□□ 0.88
HPS4-210ENST00000473782 C7orf61Q8IZ16 206 aa20.56■□□□□ 0.88
HPS4-210ENST00000473782 FAM151AQ8WW52 585 aa20.56■□□□□ 0.88
HPS4-210ENST00000473782 MAGEA10P43363 369 aaPredicted RBP20.55■□□□□ 0.88
HPS4-210ENST00000473782 TAF7LQ5H9L4 462 aa20.55■□□□□ 0.88
HPS4-210ENST00000473782 HHIPL2Q6UWX4 724 aa20.55■□□□□ 0.88
HPS4-210ENST00000473782 NECAB2Q7Z6G3 386 aa20.55■□□□□ 0.88
HPS4-210ENST00000473782 TBC1D22AQ8WUA7 517 aa20.55■□□□□ 0.88
HPS4-210ENST00000473782 TMOD2Q9NZR1 351 aa20.55■□□□□ 0.88
HPS4-210ENST00000473782 A0A0G2JLL6 359 aaPredicted RBP20.54■□□□□ 0.88
HPS4-210ENST00000473782 NFIAQ12857 509 aa20.54■□□□□ 0.88
HPS4-210ENST00000473782 PRRT2Q7Z6L0 340 aaPredicted RBP20.54■□□□□ 0.88
HPS4-210ENST00000473782 PHF20L1A8MW92 1017 aa20.53■□□□□ 0.88
HPS4-210ENST00000473782 GRM8O00222 908 aa20.53■□□□□ 0.88
HPS4-210ENST00000473782 SYN1P17600 705 aa20.53■□□□□ 0.88
HPS4-210ENST00000473782 ZFPM1Q8IX07 1006 aa20.53■□□□□ 0.88
HPS4-210ENST00000473782 TDHQ8IZJ6 230 aa20.53■□□□□ 0.88
HPS4-210ENST00000473782 VGLL2Q8N8G2 317 aa20.53■□□□□ 0.88
HPS4-210ENST00000473782 FAM198AQ9UFP1 575 aa20.53■□□□□ 0.88
HPS4-210ENST00000473782 ATRNL1Q5VV63 1379 aa20.53■□□□□ 0.88
HPS4-210ENST00000473782 DOCK3Q8IZD9 2030 aa20.53■□□□□ 0.88
HPS4-210ENST00000473782 VAMP4O75379 141 aa20.52■□□□□ 0.88
HPS4-210ENST00000473782 TCP10Q12799 353 aa20.52■□□□□ 0.88
HPS4-210ENST00000473782 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.52■□□□□ 0.88
HPS4-210ENST00000473782 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.52■□□□□ 0.88
HPS4-210ENST00000473782 SUGT1Q9Y2Z0 365 aa20.52■□□□□ 0.88
HPS4-210ENST00000473782 AFG3L2Q9Y4W6 797 aa20.52■□□□□ 0.88
HPS4-210ENST00000473782 LRRC24Q50LG9 513 aa20.51■□□□□ 0.87
HPS4-210ENST00000473782 CDC42EP5Q6NZY7 148 aa20.51■□□□□ 0.87
HPS4-210ENST00000473782 MROH5Q6ZUA9 1318 aa20.51■□□□□ 0.87
HPS4-210ENST00000473782 TNPO2O14787 897 aaKnown RBP20.5■□□□□ 0.87
HPS4-210ENST00000473782 DDX10Q13206 875 aaKnown RBP20.5■□□□□ 0.87
HPS4-210ENST00000473782 VPS37DQ86XT2 251 aa20.5■□□□□ 0.87
HPS4-210ENST00000473782 ANKLE1Q8NAG6 615 aa20.5■□□□□ 0.87
HPS4-210ENST00000473782 SUCLG2Q96I99 432 aa20.5■□□□□ 0.87
HPS4-210ENST00000473782 SLC45A1Q9Y2W3 748 aa20.5■□□□□ 0.87
HPS4-210ENST00000473782 ZHX2Q9Y6X8 837 aa20.5■□□□□ 0.87
HPS4-210ENST00000473782 PRUNE2Q8WUY3 3088 aa20.49■□□□□ 0.87
HPS4-210ENST00000473782 SLURP2P0DP57 97 aa20.49■□□□□ 0.87
HPS4-210ENST00000473782 PTPRAP18433 802 aa20.49■□□□□ 0.87
HPS4-210ENST00000473782 TRIM32Q13049 653 aa20.49■□□□□ 0.87
HPS4-210ENST00000473782 FASTKD5Q7L8L6 764 aaKnown RBP20.49■□□□□ 0.87
HPS4-210ENST00000473782 WWC1Q8IX03 1113 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms