RNA–Protein interactions for RNA: ENST00000473002.1

ITGA4-206, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-206ENST00000473002 DSC3Q14574 896 aa8.4□□□□□ -1.06
ITGA4-206ENST00000473002 SGO2Q562F6 1265 aa8.4□□□□□ -1.06
ITGA4-206ENST00000473002 DDX54Q8TDD1 881 aaKnown RBP8.4□□□□□ -1.06
ITGA4-206ENST00000473002 DBNDD2Q9BQY9 259 aa8.4□□□□□ -1.06
ITGA4-206ENST00000473002 MAP4P27816 1152 aaKnown RBP8.39□□□□□ -1.07
ITGA4-206ENST00000473002 PI16Q6UXB8 463 aa8.39□□□□□ -1.07
ITGA4-206ENST00000473002 NLRP2Q9NX02 1062 aa8.39□□□□□ -1.07
ITGA4-206ENST00000473002 BIVM-ERCC5R4GMW8 1640 aa8.39□□□□□ -1.07
ITGA4-206ENST00000473002 DIP2BQ9P265 1576 aa8.39□□□□□ -1.07
ITGA4-206ENST00000473002 RUSC2Q8N2Y8 1516 aa8.39□□□□□ -1.07
ITGA4-206ENST00000473002 GRIN2AQ12879 1464 aa8.38□□□□□ -1.07
ITGA4-206ENST00000473002 PNMA6FA0A0J9YX94 578 aa8.38□□□□□ -1.07
ITGA4-206ENST00000473002 ECEL1O95672 775 aa8.38□□□□□ -1.07
ITGA4-206ENST00000473002 PLCB3Q01970 1234 aa8.38□□□□□ -1.07
ITGA4-206ENST00000473002 SOX4Q06945 474 aaPredicted RBP8.38□□□□□ -1.07
ITGA4-206ENST00000473002 RPS26P11Q5JNZ5 115 aaPredicted RBP8.38□□□□□ -1.07
ITGA4-206ENST00000473002 ZDHHC13Q8IUH4 622 aa8.38□□□□□ -1.07
ITGA4-206ENST00000473002 CORO1BQ9BR76 489 aa8.38□□□□□ -1.07
ITGA4-206ENST00000473002 TGFB1P01137 390 aa8.37□□□□□ -1.07
ITGA4-206ENST00000473002 RXRBP28702 533 aa8.37□□□□□ -1.07
ITGA4-206ENST00000473002 FAAP100Q0VG06 881 aa8.37□□□□□ -1.07
ITGA4-206ENST00000473002 ENOX2Q16206 610 aaKnown RBP8.37□□□□□ -1.07
ITGA4-206ENST00000473002 HP1BP3Q5SSJ5 553 aaPredicted RBP8.37□□□□□ -1.07
ITGA4-206ENST00000473002 NBPF11Q86T75 865 aa8.37□□□□□ -1.07
ITGA4-206ENST00000473002 C2CD4AQ8NCU7 369 aaPredicted RBP8.37□□□□□ -1.07
ITGA4-206ENST00000473002 TRAIPQ9BWF2 469 aa8.37□□□□□ -1.07
ITGA4-206ENST00000473002 ZFYVE1Q9HBF4 777 aa8.37□□□□□ -1.07
ITGA4-206ENST00000473002 ABCA10Q8WWZ4 1543 aa8.37□□□□□ -1.07
ITGA4-206ENST00000473002 NUP160Q12769 1436 aa8.37□□□□□ -1.07
ITGA4-206ENST00000473002 ADH5P11766 374 aa8.36□□□□□ -1.07
ITGA4-206ENST00000473002 SSTR4P31391 388 aa8.36□□□□□ -1.07
ITGA4-206ENST00000473002 FCGRTP55899 365 aa8.36□□□□□ -1.07
ITGA4-206ENST00000473002 BCO2Q9BYV7 579 aa8.36□□□□□ -1.07
ITGA4-206ENST00000473002 CD97P48960 835 aa8.35□□□□□ -1.07
ITGA4-206ENST00000473002 USP11P51784 963 aa8.35□□□□□ -1.07
ITGA4-206ENST00000473002 ZNF157P51786 506 aaPredicted RBP8.35□□□□□ -1.07
ITGA4-206ENST00000473002 AP3B2Q13367 1082 aa8.35□□□□□ -1.07
ITGA4-206ENST00000473002 CDPF1Q6NVV7 123 aa8.35□□□□□ -1.07
ITGA4-206ENST00000473002 DTHD1Q6ZMT9 781 aa8.35□□□□□ -1.07
ITGA4-206ENST00000473002 SHKBP1Q8TBC3 707 aa8.35□□□□□ -1.07
ITGA4-206ENST00000473002 FBLIM1Q8WUP2 373 aa8.35□□□□□ -1.07
ITGA4-206ENST00000473002 RAD18Q9NS91 495 aa8.35□□□□□ -1.07
ITGA4-206ENST00000473002 PCMTD2Q9NV79 361 aa8.35□□□□□ -1.07
ITGA4-206ENST00000473002 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.34□□□□□ -1.07
ITGA4-206ENST00000473002 AKAP4Q5JQC9 854 aa8.34□□□□□ -1.07
ITGA4-206ENST00000473002 ZSCAN29Q8IWY8 852 aaPredicted RBP8.34□□□□□ -1.07
ITGA4-206ENST00000473002 MFSD14AQ96MC6 490 aa8.34□□□□□ -1.07
ITGA4-206ENST00000473002 ASB16Q96NS5 453 aa8.34□□□□□ -1.07
ITGA4-206ENST00000473002 PPP4R2Q9NY27 417 aa8.34□□□□□ -1.07
ITGA4-206ENST00000473002 ACTL7BQ9Y614 415 aa8.34□□□□□ -1.07
ITGA4-206ENST00000473002 FAM95CA0A1B0GW59 222 aa8.33□□□□□ -1.08
ITGA4-206ENST00000473002 PRR19A6NJB7 356 aa8.33□□□□□ -1.08
ITGA4-206ENST00000473002 COBLO75128 1261 aa8.33□□□□□ -1.08
ITGA4-206ENST00000473002 MAPK8P45983 427 aa8.33□□□□□ -1.08
ITGA4-206ENST00000473002 FMR1Q06787 632 aaKnown RBP eCLIP8.33□□□□□ -1.08
ITGA4-206ENST00000473002 PDE3AQ14432 1141 aa8.33□□□□□ -1.08
ITGA4-206ENST00000473002 NXPE4Q6UWF7 544 aa8.33□□□□□ -1.08
ITGA4-206ENST00000473002 WDR64B1ANS9 1081 aa8.32□□□□□ -1.08
ITGA4-206ENST00000473002 MED26O95402 600 aa8.32□□□□□ -1.08
ITGA4-206ENST00000473002 XRCC5P13010 732 aaKnown RBP8.32□□□□□ -1.08
ITGA4-206ENST00000473002 NFKBIBQ15653 356 aa8.32□□□□□ -1.08
ITGA4-206ENST00000473002 PAOXQ6QHF9 649 aa8.32□□□□□ -1.08
ITGA4-206ENST00000473002 EZH1Q92800 747 aaPredicted RBP8.32□□□□□ -1.08
ITGA4-206ENST00000473002 WDR18Q9BV38 432 aa8.32□□□□□ -1.08
ITGA4-206ENST00000473002 YIPF2Q9BWQ6 316 aa8.32□□□□□ -1.08
ITGA4-206ENST00000473002 GPN3Q9UHW5 284 aaPredicted RBP8.32□□□□□ -1.08
ITGA4-206ENST00000473002 AP4E1Q9UPM8 1137 aa8.32□□□□□ -1.08
ITGA4-206ENST00000473002 PATL2C9JE40 543 aaKnown RBP8.31□□□□□ -1.08
ITGA4-206ENST00000473002 AOC2O75106 756 aa8.31□□□□□ -1.08
ITGA4-206ENST00000473002 DYMQ7RTS9 669 aa8.31□□□□□ -1.08
ITGA4-206ENST00000473002 FBF1Q8TES7 1133 aa8.31□□□□□ -1.08
ITGA4-206ENST00000473002 TOP2BQ02880 1626 aa8.3□□□□□ -1.08
ITGA4-206ENST00000473002 KIAA1324LA8MWY0 1029 aaPredicted RBP8.3□□□□□ -1.08
ITGA4-206ENST00000473002 GRIK1P39086 918 aa8.3□□□□□ -1.08
ITGA4-206ENST00000473002 PPP2R3AQ06190 1150 aa8.3□□□□□ -1.08
ITGA4-206ENST00000473002 FBXL6Q8N531 539 aa8.3□□□□□ -1.08
ITGA4-206ENST00000473002 SETDB2Q96T68 719 aa8.3□□□□□ -1.08
ITGA4-206ENST00000473002 ZC3H12CQ9C0D7 883 aaKnown RBP8.3□□□□□ -1.08
ITGA4-206ENST00000473002 CCDC86Q9H6F5 360 aaKnown RBP8.3□□□□□ -1.08
ITGA4-206ENST00000473002 FAM105AQ9NUU6 356 aa8.3□□□□□ -1.08
ITGA4-206ENST00000473002 TMEM39AQ9NV64 488 aa8.3□□□□□ -1.08
ITGA4-206ENST00000473002 AKAP2Q9Y2D5 859 aa8.3□□□□□ -1.08
ITGA4-206ENST00000473002 SYNGAP1Q96PV0 1343 aa8.29□□□□□ -1.08
ITGA4-206ENST00000473002 F13BP05160 661 aa8.29□□□□□ -1.08
ITGA4-206ENST00000473002 GSTP1P09211 210 aaKnown RBP8.29□□□□□ -1.08
ITGA4-206ENST00000473002 RAB6AP20340 208 aa8.29□□□□□ -1.08
ITGA4-206ENST00000473002 INTS5Q6P9B9 1019 aaKnown RBP8.29□□□□□ -1.08
ITGA4-206ENST00000473002 GSX1Q9H4S2 264 aaPredicted RBP8.29□□□□□ -1.08
ITGA4-206ENST00000473002 CUL7Q14999 1698 aa8.29□□□□□ -1.08
ITGA4-206ENST00000473002 KDM6BO15054 1643 aa8.29□□□□□ -1.08
ITGA4-206ENST00000473002 COL17A1Q9UMD9 1497 aaPredicted RBP8.28□□□□□ -1.08
ITGA4-206ENST00000473002 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.28□□□□□ -1.08
ITGA4-206ENST00000473002 NFICP08651 508 aa8.28□□□□□ -1.08
ITGA4-206ENST00000473002 LIG1P18858 919 aa8.28□□□□□ -1.08
ITGA4-206ENST00000473002 ASPAP45381 313 aa8.28□□□□□ -1.08
ITGA4-206ENST00000473002 SHISA5Q8N114 240 aa8.28□□□□□ -1.08
ITGA4-206ENST00000473002 C3orf58Q8NDZ4 430 aa8.28□□□□□ -1.08
ITGA4-206ENST00000473002 GIMAP7Q8NHV1 300 aa8.28□□□□□ -1.08
ITGA4-206ENST00000473002 WDR89Q96FK6 387 aaPredicted RBP8.28□□□□□ -1.08
ITGA4-206ENST00000473002 TBC1D32Q96NH3 1257 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms