RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 ZNF804AQ7Z570 1209 aa11.21□□□□□ -0.61
SMC4-214ENST00000472991 ZNF526Q8TF50 670 aaPredicted RBP11.21□□□□□ -0.61
SMC4-214ENST00000472991 LPIN2Q92539 896 aa11.21□□□□□ -0.61
SMC4-214ENST00000472991 COA1Q9GZY4 146 aa11.21□□□□□ -0.61
SMC4-214ENST00000472991 AKAP2Q9Y2D5 859 aa11.21□□□□□ -0.61
SMC4-214ENST00000472991 POLR2AP24928 1970 aaKnown RBP11.21□□□□□ -0.62
SMC4-214ENST00000472991 MYH7P12883 1935 aa11.21□□□□□ -0.62
SMC4-214ENST00000472991 MYH2Q9UKX2 1941 aa11.2□□□□□ -0.62
SMC4-214ENST00000472991 A0A1B0GUL7 405 aa11.2□□□□□ -0.62
SMC4-214ENST00000472991 GLTPD2A6NH11 291 aa11.2□□□□□ -0.62
SMC4-214ENST00000472991 DDNO94850 711 aaPredicted RBP11.2□□□□□ -0.62
SMC4-214ENST00000472991 ADORA1P30542 326 aa11.2□□□□□ -0.62
SMC4-214ENST00000472991 HIBADHP31937 336 aaKnown RBP11.2□□□□□ -0.62
SMC4-214ENST00000472991 HSP90AB4PQ58FF6 505 aa11.2□□□□□ -0.62
SMC4-214ENST00000472991 TJAP1Q5JTD0 557 aa11.2□□□□□ -0.62
SMC4-214ENST00000472991 SWT1Q5T5J6 900 aaKnown RBP11.2□□□□□ -0.62
SMC4-214ENST00000472991 CIAPIN1Q6FI81 312 aa11.2□□□□□ -0.62
SMC4-214ENST00000472991 ERC1Q8IUD2 1116 aa11.2□□□□□ -0.62
SMC4-214ENST00000472991 FAM84BQ96KN1 310 aaPredicted RBP11.2□□□□□ -0.62
SMC4-214ENST00000472991 CD209Q9NNX6 404 aa11.2□□□□□ -0.62
SMC4-214ENST00000472991 KCNQ5Q9NR82 932 aa11.2□□□□□ -0.62
SMC4-214ENST00000472991 GJA3Q9Y6H8 435 aa11.2□□□□□ -0.62
SMC4-214ENST00000472991 DOCK2Q92608 1830 aa11.2□□□□□ -0.62
SMC4-214ENST00000472991 AK9Q5TCS8 1911 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 MAST2Q6P0Q8 1798 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 KDM2BQ8NHM5 1336 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 PSMD14O00487 310 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 TIMM10P62072 90 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 TNNI3KQ59H18 835 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 PODNQ7Z5L7 613 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 VPS37DQ86XT2 251 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 GPC2Q8N158 579 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 RHPN1Q8TCX5 695 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 NEUROD6Q96NK8 337 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 DCTPP1Q9H773 170 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 IL1RAPL2Q9NP60 686 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 IQSEC3Q9UPP2 1182 aaPredicted RBP11.19□□□□□ -0.62
SMC4-214ENST00000472991 FPGT-TNNI3KV9GXZ4 949 aa11.19□□□□□ -0.62
SMC4-214ENST00000472991 COL1A1P02452 1464 aaPredicted RBP11.19□□□□□ -0.62
SMC4-214ENST00000472991 RNF40O75150 1001 aa11.18□□□□□ -0.62
SMC4-214ENST00000472991 RAB11FIP3O75154 756 aa11.18□□□□□ -0.62
SMC4-214ENST00000472991 IL1R1P14778 569 aa11.18□□□□□ -0.62
SMC4-214ENST00000472991 TNIP1Q15025 636 aa11.18□□□□□ -0.62
SMC4-214ENST00000472991 CAVIN4Q5BKX8 364 aa11.18□□□□□ -0.62
SMC4-214ENST00000472991 FBXO33Q7Z6M2 555 aa11.18□□□□□ -0.62
SMC4-214ENST00000472991 KIF1BPQ96EK5 621 aa11.18□□□□□ -0.62
SMC4-214ENST00000472991 XAGE2Q96GT9 111 aa11.18□□□□□ -0.62
SMC4-214ENST00000472991 BCL11AQ9H165 835 aa11.18□□□□□ -0.62
SMC4-214ENST00000472991 GPR108Q9NPR9 543 aa11.18□□□□□ -0.62
SMC4-214ENST00000472991 USP17L3A6NCW0 530 aa11.17□□□□□ -0.62
SMC4-214ENST00000472991 USP17L4A6NCW7 530 aa11.17□□□□□ -0.62
SMC4-214ENST00000472991 NEFLP07196 543 aa11.17□□□□□ -0.62
SMC4-214ENST00000472991 PHKA1P46020 1223 aa11.17□□□□□ -0.62
SMC4-214ENST00000472991 APLP1P51693 650 aa11.17□□□□□ -0.62
SMC4-214ENST00000472991 GTF2IP78347 998 aa11.17□□□□□ -0.62
SMC4-214ENST00000472991 HDAC1Q13547 482 aaPredicted RBP11.17□□□□□ -0.62
SMC4-214ENST00000472991 USP17L1Q7RTZ2 530 aa11.17□□□□□ -0.62
SMC4-214ENST00000472991 AACSQ86V21 672 aa11.17□□□□□ -0.62
SMC4-214ENST00000472991 ZNF784Q8NCA9 323 aaPredicted RBP11.17□□□□□ -0.62
SMC4-214ENST00000472991 TDRD7Q8NHU6 1098 aaKnown RBP11.17□□□□□ -0.62
SMC4-214ENST00000472991 EAF2Q96CJ1 260 aaPredicted RBP11.17□□□□□ -0.62
SMC4-214ENST00000472991 DBNDD2Q9BQY9 259 aa11.17□□□□□ -0.62
SMC4-214ENST00000472991 CCDC8Q9H0W5 538 aaPredicted RBP11.17□□□□□ -0.62
SMC4-214ENST00000472991 NMRK2Q9NPI5 230 aa11.17□□□□□ -0.62
SMC4-214ENST00000472991 TLR7Q9NYK1 1049 aaKnown RBP11.17□□□□□ -0.62
SMC4-214ENST00000472991 JAG2Q9Y219 1238 aa11.17□□□□□ -0.62
SMC4-214ENST00000472991 SMARCA5O60264 1052 aaPredicted RBP11.16□□□□□ -0.62
SMC4-214ENST00000472991 FRAT2O75474 233 aaPredicted RBP11.16□□□□□ -0.62
SMC4-214ENST00000472991 GMPSP49915 693 aaPredicted RBP11.16□□□□□ -0.62
SMC4-214ENST00000472991 CHAF1AQ13111 956 aaPredicted RBP11.16□□□□□ -0.62
SMC4-214ENST00000472991 GORABQ5T7V8 394 aa11.16□□□□□ -0.62
SMC4-214ENST00000472991 STRIP1Q5VSL9 837 aa11.16□□□□□ -0.62
SMC4-214ENST00000472991 CCDC102BQ68D86 513 aa11.16□□□□□ -0.62
SMC4-214ENST00000472991 TTLL5Q6EMB2 1281 aa11.16□□□□□ -0.62
SMC4-214ENST00000472991 MTRQ99707 1265 aa11.16□□□□□ -0.62
SMC4-214ENST00000472991 MXD3Q9BW11 206 aa11.16□□□□□ -0.62
SMC4-214ENST00000472991 LRRCC1Q9C099 1032 aa11.16□□□□□ -0.62
SMC4-214ENST00000472991 GPBP1L1Q9HC44 474 aaPredicted RBP11.16□□□□□ -0.62
SMC4-214ENST00000472991 DBNLQ9UJU6 430 aaKnown RBP11.16□□□□□ -0.62
SMC4-214ENST00000472991 FAM205AQ6ZU69 1335 aa11.15□□□□□ -0.62
SMC4-214ENST00000472991 IGHDP01880 384 aa11.15□□□□□ -0.62
SMC4-214ENST00000472991 VIL1P09327 827 aaKnown RBP11.15□□□□□ -0.62
SMC4-214ENST00000472991 SCNN1DP51172 638 aa11.15□□□□□ -0.62
SMC4-214ENST00000472991 DACT2Q5SW24 774 aa11.15□□□□□ -0.62
SMC4-214ENST00000472991 RSBN1LQ6PCB5 846 aaPredicted RBP11.15□□□□□ -0.62
SMC4-214ENST00000472991 SLF2Q8IX21 1173 aa11.15□□□□□ -0.62
SMC4-214ENST00000472991 CLASRPQ8N2M8 674 aaKnown RBP11.15□□□□□ -0.62
SMC4-214ENST00000472991 RWDD1Q9H446 243 aaPredicted RBP11.15□□□□□ -0.62
SMC4-214ENST00000472991 RRAGCQ9HB90 399 aa11.15□□□□□ -0.62
SMC4-214ENST00000472991 GNL3LQ9NVN8 582 aaKnown RBP11.15□□□□□ -0.62
SMC4-214ENST00000472991 ADGRG1Q9Y653 693 aa11.15□□□□□ -0.62
SMC4-214ENST00000472991 CDK5RAP2Q96SN8 1893 aa11.15□□□□□ -0.63
SMC4-214ENST00000472991 SHTN1A0MZ66 631 aa11.14□□□□□ -0.63
SMC4-214ENST00000472991 TESPA1A2RU30 521 aaPredicted RBP11.14□□□□□ -0.63
SMC4-214ENST00000472991 POTECB2RU33 542 aa11.14□□□□□ -0.63
SMC4-214ENST00000472991 RPS12P25398 132 aaKnown RBP11.14□□□□□ -0.63
SMC4-214ENST00000472991 ARID4AP29374 1257 aaPredicted RBP11.14□□□□□ -0.63
SMC4-214ENST00000472991 LMOD1P29536 600 aaPredicted RBP11.14□□□□□ -0.63
SMC4-214ENST00000472991 RASGRF1Q13972 1273 aa11.14□□□□□ -0.63
SMC4-214ENST00000472991 CERS5Q8N5B7 392 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms