RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 ECEL1O95672 775 aa7.7□□□□□ -1.18
PRPF40A-208ENST00000472760 VPS37DQ86XT2 251 aa7.7□□□□□ -1.18
PRPF40A-208ENST00000472760 ACSBG1Q96GR2 724 aa7.7□□□□□ -1.18
PRPF40A-208ENST00000472760 NRSN2Q9GZP1 204 aa7.7□□□□□ -1.18
PRPF40A-208ENST00000472760 KCNK4Q9NYG8 393 aa7.7□□□□□ -1.18
PRPF40A-208ENST00000472760 CNTNAP5Q8WYK1 1306 aa7.7□□□□□ -1.18
PRPF40A-208ENST00000472760 FAM229AH3BQW9 127 aa7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 DLL1O00548 723 aa7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 ADAM11O75078 769 aa7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 TRIM37O94972 964 aa7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 SEPT6Q14141 434 aa7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 DUOXA2Q1HG44 320 aa7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 SCARA3Q6AZY7 606 aa7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 MPRIPQ6WCQ1 1025 aa7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 CCDC84Q86UT8 332 aaPredicted RBP7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 TINF2Q9BSI4 451 aa7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 CCDC86Q9H6F5 360 aaKnown RBP7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 KCNQ5Q9NR82 932 aa7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 KRT82Q9NSB4 513 aa7.69□□□□□ -1.18
PRPF40A-208ENST00000472760 LOC100289279A0A1B0GTE1 492 aa7.68□□□□□ -1.18
PRPF40A-208ENST00000472760 ELNP15502 786 aa7.68□□□□□ -1.18
PRPF40A-208ENST00000472760 GARTP22102 1010 aa7.68□□□□□ -1.18
PRPF40A-208ENST00000472760 IGF2-ASQ6U949 168 aa7.68□□□□□ -1.18
PRPF40A-208ENST00000472760 BNC2Q6ZN30 1099 aaPredicted RBP7.68□□□□□ -1.18
PRPF40A-208ENST00000472760 GPRASP2Q96D09 838 aa7.68□□□□□ -1.18
PRPF40A-208ENST00000472760 SCARF2Q96GP6 870 aaPredicted RBP7.68□□□□□ -1.18
PRPF40A-208ENST00000472760 EAF1Q96JC9 268 aaPredicted RBP7.68□□□□□ -1.18
PRPF40A-208ENST00000472760 RAD18Q9NS91 495 aa7.68□□□□□ -1.18
PRPF40A-208ENST00000472760 GREM1O60565 184 aa7.67□□□□□ -1.18
PRPF40A-208ENST00000472760 BPNT1O95861 308 aa7.67□□□□□ -1.18
PRPF40A-208ENST00000472760 F13A1P00488 732 aa7.67□□□□□ -1.18
PRPF40A-208ENST00000472760 CTSBP07858 339 aa7.67□□□□□ -1.18
PRPF40A-208ENST00000472760 LIG1P18858 919 aa7.67□□□□□ -1.18
PRPF40A-208ENST00000472760 FAM196AQ6ZSG2 479 aa7.67□□□□□ -1.18
PRPF40A-208ENST00000472760 SLC43A3Q8NBI5 491 aa7.67□□□□□ -1.18
PRPF40A-208ENST00000472760 GPBAR1Q8TDU6 330 aa7.67□□□□□ -1.18
PRPF40A-208ENST00000472760 UBASH3BQ8TF42 649 aa7.67□□□□□ -1.18
PRPF40A-208ENST00000472760 GATAD2BQ8WXI9 593 aa7.67□□□□□ -1.18
PRPF40A-208ENST00000472760 NT5C1AQ9BXI3 368 aa7.67□□□□□ -1.18
PRPF40A-208ENST00000472760 PCDHA4Q9UN74 947 aa7.67□□□□□ -1.18
PRPF40A-208ENST00000472760 TLR3O15455 904 aaKnown RBP7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 SLFN14P0C7P3 912 aa7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 GJA8P48165 433 aa7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 PTPN11Q06124 597 aaPredicted RBP7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 APOBRQ0VD83 1088 aa7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 EXOSC6Q5RKV6 272 aaKnown RBP7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 ACAD11Q709F0 780 aa7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 GAL3ST3Q96A11 431 aa7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 SPATA32Q96LK8 384 aa7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 RUSC1Q9BVN2 902 aa7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 MRPL18Q9H0U6 180 aaKnown RBP7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 UBP1Q9NZI7 540 aa7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 ROBO2Q9HCK4 1378 aa7.66□□□□□ -1.18
PRPF40A-208ENST00000472760 ZNF862O60290 1169 aa7.65□□□□□ -1.18
PRPF40A-208ENST00000472760 DLGAP3O95886 979 aa7.65□□□□□ -1.18
PRPF40A-208ENST00000472760 SPATA31C1P0DKV0 1188 aa7.65□□□□□ -1.18
PRPF40A-208ENST00000472760 DNAJA1P31689 397 aaKnown RBP7.65□□□□□ -1.18
PRPF40A-208ENST00000472760 ARID5AQ03989 594 aa7.65□□□□□ -1.18
PRPF40A-208ENST00000472760 GRIK4Q16099 956 aa7.65□□□□□ -1.18
PRPF40A-208ENST00000472760 NKD1Q969G9 470 aa7.65□□□□□ -1.18
PRPF40A-208ENST00000472760 CACNA2D2Q9NY47 1150 aa7.65□□□□□ -1.18
PRPF40A-208ENST00000472760 FAM221AA4D161 298 aa7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 FAM181BA6NEQ2 426 aa7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 CILPO75339 1184 aa7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 WISP1O95388 367 aa7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 MPP2Q14168 576 aa7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 SF3A1Q15459 793 aaKnown RBP7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 CWF19L2Q2TBE0 894 aaKnown RBP7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 NUTM2GQ5VZR2 741 aa7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 FBXO27Q8NI29 283 aa7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 RASGRP4Q8TDF6 673 aa7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 SREK1Q8WXA9 508 aaKnown RBP7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 WDR89Q96FK6 387 aaPredicted RBP7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 RNF208Q9H0X6 261 aa7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 USP35Q9P2H5 1018 aa7.64□□□□□ -1.19
PRPF40A-208ENST00000472760 AOC2O75106 756 aa7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 MCM4P33991 863 aa7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 RPL6Q02878 288 aaKnown RBP7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 KIF4BQ2VIQ3 1234 aa7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 SEZ6Q53EL9 994 aa7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 SHISA2Q6UWI4 295 aa7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 ELMO3Q96BJ8 720 aa7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 WDR18Q9BV38 432 aa7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 TANGO6Q9C0B7 1094 aa7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 CYP4F12Q9HCS2 524 aa7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 PPP1R1BQ9UD71 204 aaPredicted RBP7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 PRKAG2Q9UGJ0 569 aa7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 USP21Q9UK80 565 aa7.63□□□□□ -1.19
PRPF40A-208ENST00000472760 MEGF11A6BM72 1044 aa7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 APBA3O96018 575 aa7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 ATF4P18848 351 aaPredicted RBP7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 CRKP46108 304 aa7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 AKAP4Q5JQC9 854 aa7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 KIAA1211Q6ZU35 1233 aa7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 HDXQ7Z353 690 aa7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 SEC16BQ96JE7 1060 aa7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 DRC1Q96MC2 740 aa7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 NACC1Q96RE7 527 aa7.62□□□□□ -1.19
PRPF40A-208ENST00000472760 LRRC3Q9BY71 257 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms