RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 SLC7A5Q01650 507 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 PPP2R5CQ13362 524 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 SHROOM1Q2M3G4 852 aaPredicted RBP3.83□□□□□ -1.8
TTC3-214ENST00000472398 COBLL1Q53SF7 1204 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 CCDC158Q5M9N0 1113 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 MAATS1Q7Z4T9 603 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 RGL4Q8IZJ4 473 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 FAM43AQ8N2R8 423 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 LILRB2Q8N423 598 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 KCT2Q8NC54 265 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 STON2Q8WXE9 905 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 ZBTB9Q96C00 473 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 FAM167BQ9BTA0 163 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 SELENOOQ9BVL4 669 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 RWDD1Q9H446 243 aaPredicted RBP3.83□□□□□ -1.8
TTC3-214ENST00000472398 SMYD2Q9NRG4 433 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 UTP6Q9NYH9 597 aaKnown RBP3.83□□□□□ -1.8
TTC3-214ENST00000472398 PGAP2Q9UHJ9 254 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 GTF2A1LQ9UNN4 478 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 RRP15Q9Y3B9 282 aaKnown RBP3.83□□□□□ -1.8
TTC3-214ENST00000472398 PCDHGB3Q9Y5G1 929 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 N6AMT1Q9Y5N5 214 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 ZCCHC6Q5VYS8 1495 aaKnown RBP3.83□□□□□ -1.8
TTC3-214ENST00000472398 RAD54L2Q9Y4B4 1467 aa3.83□□□□□ -1.8
TTC3-214ENST00000472398 ATP9BO43861 1147 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 F2P00734 622 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 PGRP06401 933 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 ZNF853P0CG23 659 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 ATF4P18848 351 aaPredicted RBP3.82□□□□□ -1.8
TTC3-214ENST00000472398 VARSP26640 1264 aaKnown RBP3.82□□□□□ -1.8
TTC3-214ENST00000472398 HALP42357 657 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 EPHB1P54762 984 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 KCNC4Q03721 635 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 AMOTQ4VCS5 1084 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 FAM133BQ5BKY9 247 aaKnown RBP3.82□□□□□ -1.8
TTC3-214ENST00000472398 LLGL2Q6P1M3 1020 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 CYP26C1Q6V0L0 522 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 MIGA1Q8NAN2 632 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 GABPB2Q8TAK5 448 aaPredicted RBP3.82□□□□□ -1.8
TTC3-214ENST00000472398 CLP1Q92989 425 aaKnown RBP3.82□□□□□ -1.8
TTC3-214ENST00000472398 LZTS2Q9BRK4 669 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 ZNF408Q9H9D4 720 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 DDX41Q9UJV9 622 aaKnown RBP3.82□□□□□ -1.8
TTC3-214ENST00000472398 TPCN1Q9ULQ1 816 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 IKBKGQ9Y6K9 419 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 ZBBXA8MT70 800 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 AKAP10O43572 662 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 ICMTO60725 284 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 TRIM37O94972 964 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 HSP90AB1P08238 724 aaKnown RBP3.82□□□□□ -1.8
TTC3-214ENST00000472398 COPAP53621 1224 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 UBASH3AP57075 661 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 UBXN2AP68543 259 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 CLDN10P78369 228 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 DMTNQ08495 405 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 PTPN14Q15678 1187 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 SH3BP5LQ7L8J4 393 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 GLYCTKQ8IVS8 523 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 NKAIN3Q8N8D7 197 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 NKX2-3Q8TAU0 364 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 WDR66Q8TBY9 1149 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 OCSTAMPQ9BR26 566 aa3.82□□□□□ -1.8
TTC3-214ENST00000472398 RTFDC1Q9BY42 306 aaPredicted RBP3.82□□□□□ -1.8
TTC3-214ENST00000472398 KCNQ2O43526 872 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 TPM3P06753 285 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 FBXO45P0C2W1 286 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 RPL17P18621 184 aaKnown RBP3.81□□□□□ -1.8
TTC3-214ENST00000472398 PPM1FP49593 454 aaPredicted RBP3.81□□□□□ -1.8
TTC3-214ENST00000472398 ROR1Q01973 937 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 MORC3Q14149 939 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 MLECQ14165 292 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 TUBB8Q3ZCM7 444 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 NBPF14Q5TI25 921 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 PTCRAQ6ISU1 281 aaPredicted RBP3.81□□□□□ -1.8
TTC3-214ENST00000472398 CCDC129Q6ZRS4 1044 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 TMC7Q7Z402 723 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 KIAA0825Q8IV33 1275 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 DEPDC4Q8N2C3 294 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 ARL10Q8N8L6 244 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 UROC1Q96N76 676 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 C2orf49Q9BVC5 232 aaPredicted RBP3.81□□□□□ -1.8
TTC3-214ENST00000472398 SLC7A5P2Q9GIP4 190 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 NUCKS1Q9H1E3 243 aaKnown RBP3.81□□□□□ -1.8
TTC3-214ENST00000472398 PLEKHA5Q9HAU0 1116 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 DIAPH3Q9NSV4 1193 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 NOB1Q9ULX3 412 aaKnown RBP3.81□□□□□ -1.8
TTC3-214ENST00000472398 SNX5Q9Y5X3 404 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 IL16Q14005 1332 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 USP17L15C9J2P7 530 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 USP17L10C9JJH3 530 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 USP17L13C9JLJ4 530 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 USP17L12C9JPN9 530 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 USP17L11C9JVI0 530 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 USP17L21D6R901 530 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 USP17L18D6R9N7 530 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 USP17L22D6RA61 530 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 USP17L17D6RBQ6 530 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 USP17L19D6RCP7 530 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 USP17L20D6RJB6 530 aa3.81□□□□□ -1.8
TTC3-214ENST00000472398 RBAK-RBAKDNI3L0D1 243 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms