RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 RBM8AQ9Y5S9 174 aaKnown RBP23.26■■□□□ 1.31
CHMP2B-204ENST00000472024 ZC3H4Q9UPT8 1303 aaKnown RBP23.26■■□□□ 1.31
CHMP2B-204ENST00000472024 GSG1L2A8MUP6 293 aa23.25■■□□□ 1.31
CHMP2B-204ENST00000472024 PLCG2P16885 1265 aa23.25■■□□□ 1.31
CHMP2B-204ENST00000472024 RHBDL3P58872 404 aa23.25■■□□□ 1.31
CHMP2B-204ENST00000472024 TSGA10IPQ3SY00 556 aa23.25■■□□□ 1.31
CHMP2B-204ENST00000472024 MTMR14Q8NCE2 650 aa23.25■■□□□ 1.31
CHMP2B-204ENST00000472024 DPF2Q92785 391 aa23.25■■□□□ 1.31
CHMP2B-204ENST00000472024 MCCP23508 829 aa23.24■■□□□ 1.31
CHMP2B-204ENST00000472024 CRKP46108 304 aa23.24■■□□□ 1.31
CHMP2B-204ENST00000472024 DYNLL1P63167 89 aaKnown RBP23.24■■□□□ 1.31
CHMP2B-204ENST00000472024 APOBEC3HQ6NTF7 200 aaKnown RBP23.24■■□□□ 1.31
CHMP2B-204ENST00000472024 KIAA0825Q8IV33 1275 aa23.24■■□□□ 1.31
CHMP2B-204ENST00000472024 AATFQ9NY61 560 aaKnown RBP eCLIP23.24■■□□□ 1.31
CHMP2B-204ENST00000472024 TIAM2Q8IVF5 1701 aa23.24■■□□□ 1.31
CHMP2B-204ENST00000472024 BTDP43251 543 aa23.23■■□□□ 1.31
CHMP2B-204ENST00000472024 ZNF280AP59817 542 aaPredicted RBP23.23■■□□□ 1.31
CHMP2B-204ENST00000472024 KIF2CQ99661 725 aa23.23■■□□□ 1.31
CHMP2B-204ENST00000472024 CRNKL1Q9BZJ0 848 aaKnown RBP23.23■■□□□ 1.31
CHMP2B-204ENST00000472024 EPB41L4AQ9HCS5 686 aaPredicted RBP23.23■■□□□ 1.31
CHMP2B-204ENST00000472024 MKRN1Q9UHC7 482 aaKnown RBP23.23■■□□□ 1.31
CHMP2B-204ENST00000472024 CTNNA3Q9UI47 895 aa23.23■■□□□ 1.31
CHMP2B-204ENST00000472024 FGAP02671 866 aa23.22■■□□□ 1.31
CHMP2B-204ENST00000472024 GPR162Q16538 588 aa23.22■■□□□ 1.31
CHMP2B-204ENST00000472024 IL27Q8NEV9 243 aa23.22■■□□□ 1.31
CHMP2B-204ENST00000472024 ZBED3Q96IU2 234 aaPredicted RBP23.22■■□□□ 1.31
CHMP2B-204ENST00000472024 NOL10Q9BSC4 688 aaKnown RBP23.22■■□□□ 1.31
CHMP2B-204ENST00000472024 ATP8A2Q9NTI2 1148 aa23.22■■□□□ 1.31
CHMP2B-204ENST00000472024 SLC4A4Q9Y6R1 1079 aa23.22■■□□□ 1.31
CHMP2B-204ENST00000472024 ZNF541Q9H0D2 1346 aa23.22■■□□□ 1.31
CHMP2B-204ENST00000472024 F8W031 263 aaPredicted RBP23.21■■□□□ 1.31
CHMP2B-204ENST00000472024 USP17L8P0C7I0 530 aa23.21■■□□□ 1.31
CHMP2B-204ENST00000472024 CREB3L3Q68CJ9 461 aa23.21■■□□□ 1.31
CHMP2B-204ENST00000472024 IFNL3Q8IZI9 196 aa23.21■■□□□ 1.31
CHMP2B-204ENST00000472024 HDAC9Q9UKV0 1011 aa23.21■■□□□ 1.31
CHMP2B-204ENST00000472024 ADAMTSL1Q8N6G6 1762 aa23.21■■□□□ 1.31
CHMP2B-204ENST00000472024 LAMA4Q16363 1823 aa23.21■■□□□ 1.31
CHMP2B-204ENST00000472024 FOCADQ5VW36 1801 aa23.21■■□□□ 1.31
CHMP2B-204ENST00000472024 DDX60LQ5H9U9 1706 aaKnown RBP23.2■■□□□ 1.3
CHMP2B-204ENST00000472024 SLC27A2O14975 620 aa23.2■■□□□ 1.3
CHMP2B-204ENST00000472024 PRKAB2O43741 272 aa23.2■■□□□ 1.3
CHMP2B-204ENST00000472024 NPM3O75607 178 aaKnown RBP23.2■■□□□ 1.3
CHMP2B-204ENST00000472024 SCNN1DP51172 638 aa23.2■■□□□ 1.3
CHMP2B-204ENST00000472024 RNF20Q5VTR2 975 aa23.2■■□□□ 1.3
CHMP2B-204ENST00000472024 GPC2Q8N158 579 aa23.2■■□□□ 1.3
CHMP2B-204ENST00000472024 SH3RF3Q8TEJ3 882 aaPredicted RBP23.2■■□□□ 1.3
CHMP2B-204ENST00000472024 NACAP1Q9BZK3 213 aa23.2■■□□□ 1.3
CHMP2B-204ENST00000472024 PALD1Q9ULE6 856 aa23.2■■□□□ 1.3
CHMP2B-204ENST00000472024 ZBTB12Q9Y330 459 aaPredicted RBP23.2■■□□□ 1.3
CHMP2B-204ENST00000472024 CDK5RAP2Q96SN8 1893 aa23.19■■□□□ 1.3
CHMP2B-204ENST00000472024 C9orf131Q5VYM1 1079 aa23.19■■□□□ 1.3
CHMP2B-204ENST00000472024 DCP1AQ9NPI6 582 aaPredicted RBP23.19■■□□□ 1.3
CHMP2B-204ENST00000472024 RNF181Q9P0P0 153 aa23.19■■□□□ 1.3
CHMP2B-204ENST00000472024 CYP21A2P08686 494 aa23.18■■□□□ 1.3
CHMP2B-204ENST00000472024 SBK1Q52WX2 424 aa23.18■■□□□ 1.3
CHMP2B-204ENST00000472024 RASEFQ8IZ41 740 aa23.18■■□□□ 1.3
CHMP2B-204ENST00000472024 OGFOD1Q8N543 542 aa23.18■■□□□ 1.3
CHMP2B-204ENST00000472024 RBM19Q9Y4C8 960 aaKnown RBP23.18■■□□□ 1.3
CHMP2B-204ENST00000472024 SNX14Q9Y5W7 946 aa23.18■■□□□ 1.3
CHMP2B-204ENST00000472024 SPDYE2BA6NHP3 402 aa23.17■■□□□ 1.3
CHMP2B-204ENST00000472024 SPDYE6P0CI01 402 aa23.17■■□□□ 1.3
CHMP2B-204ENST00000472024 GMPSP49915 693 aaPredicted RBP23.17■■□□□ 1.3
CHMP2B-204ENST00000472024 CFAP100Q494V2 611 aa23.17■■□□□ 1.3
CHMP2B-204ENST00000472024 CDC42EP5Q6NZY7 148 aa23.17■■□□□ 1.3
CHMP2B-204ENST00000472024 SDR42E1Q8WUS8 393 aa23.17■■□□□ 1.3
CHMP2B-204ENST00000472024 IDI2Q9BXS1 227 aa23.17■■□□□ 1.3
CHMP2B-204ENST00000472024 TM6SF1Q9BZW5 370 aa23.17■■□□□ 1.3
CHMP2B-204ENST00000472024 ANAPC4Q9UJX5 808 aa23.17■■□□□ 1.3
CHMP2B-204ENST00000472024 ECM29Q5VYK3 1845 aa23.17■■□□□ 1.3
CHMP2B-204ENST00000472024 WDHD1O75717 1129 aaPredicted RBP23.16■■□□□ 1.3
CHMP2B-204ENST00000472024 ZKSCAN1P17029 563 aaPredicted RBP23.16■■□□□ 1.3
CHMP2B-204ENST00000472024 TEX11Q8IYF3 940 aa23.16■■□□□ 1.3
CHMP2B-204ENST00000472024 NAPBQ9H115 298 aa23.16■■□□□ 1.3
CHMP2B-204ENST00000472024 KRT32Q14532 448 aa23.15■■□□□ 1.3
CHMP2B-204ENST00000472024 IMMTQ16891 758 aaKnown RBP23.15■■□□□ 1.3
CHMP2B-204ENST00000472024 COL2A1P02458 1487 aaPredicted RBP23.15■■□□□ 1.3
CHMP2B-204ENST00000472024 NAV1Q8NEY1 1877 aa23.15■■□□□ 1.3
CHMP2B-204ENST00000472024 APPP05067 770 aa23.14■■□□□ 1.29
CHMP2B-204ENST00000472024 RABEP1Q15276 862 aa23.14■■□□□ 1.29
CHMP2B-204ENST00000472024 FKBP1CQ5VVH2 108 aa23.14■■□□□ 1.29
CHMP2B-204ENST00000472024 USP40Q9NVE5 1235 aa23.14■■□□□ 1.29
CHMP2B-204ENST00000472024 ARPP21Q9UBL0 812 aaPredicted RBP23.14■■□□□ 1.29
CHMP2B-204ENST00000472024 UTRNP46939 3433 aa23.14■■□□□ 1.29
CHMP2B-204ENST00000472024 ROBO3Q96MS0 1386 aa23.14■■□□□ 1.29
CHMP2B-204ENST00000472024 FLT1P17948 1338 aa23.13■■□□□ 1.29
CHMP2B-204ENST00000472024 TDO2P48775 406 aa23.13■■□□□ 1.29
CHMP2B-204ENST00000472024 DLGAP5Q15398 846 aa23.13■■□□□ 1.29
CHMP2B-204ENST00000472024 DDRGK1Q96HY6 314 aa23.13■■□□□ 1.29
CHMP2B-204ENST00000472024 L3MBTL3Q96JM7 780 aaPredicted RBP23.13■■□□□ 1.29
CHMP2B-204ENST00000472024 PRMT6Q96LA8 375 aaPredicted RBP23.13■■□□□ 1.29
CHMP2B-204ENST00000472024 NBPF3Q9H094 633 aa23.13■■□□□ 1.29
CHMP2B-204ENST00000472024 MYOZ2Q9NPC6 264 aa23.13■■□□□ 1.29
CHMP2B-204ENST00000472024 PCDHAC2Q9Y5I4 1007 aa23.13■■□□□ 1.29
CHMP2B-204ENST00000472024 TAF6LQ9Y6J9 622 aa23.13■■□□□ 1.29
CHMP2B-204ENST00000472024 LAMB1P07942 1786 aa23.13■■□□□ 1.29
CHMP2B-204ENST00000472024 ZNF213O14771 459 aa23.12■■□□□ 1.29
CHMP2B-204ENST00000472024 FGRP09769 529 aa23.12■■□□□ 1.29
CHMP2B-204ENST00000472024 SPDYE2Q495Y8 402 aa23.12■■□□□ 1.29
CHMP2B-204ENST00000472024 CTR9Q6PD62 1173 aa23.12■■□□□ 1.29
CHMP2B-204ENST00000472024 TGFBRAP1Q8WUH2 860 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms