RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 TIAF1O95411 115 aa8.86□□□□□ -0.99
HDAC9-221ENST00000471887 BMP6P22004 513 aa8.86□□□□□ -0.99
HDAC9-221ENST00000471887 PREPP48147 710 aa8.86□□□□□ -0.99
HDAC9-221ENST00000471887 ZNF252P-AS1Q0IIN9 211 aa8.86□□□□□ -0.99
HDAC9-221ENST00000471887 LRRC14Q15048 493 aa8.86□□□□□ -0.99
HDAC9-221ENST00000471887 PCNX4Q63HM2 1172 aa8.86□□□□□ -0.99
HDAC9-221ENST00000471887 MAP1SQ66K74 1059 aaPredicted RBP8.86□□□□□ -0.99
HDAC9-221ENST00000471887 NOC4LQ9BVI4 516 aaKnown RBP8.86□□□□□ -0.99
HDAC9-221ENST00000471887 CYP8B1Q9UNU6 501 aa8.86□□□□□ -0.99
HDAC9-221ENST00000471887 SYNGAP1Q96PV0 1343 aa8.85□□□□□ -0.99
HDAC9-221ENST00000471887 AOC2O75106 756 aa8.85□□□□□ -0.99
HDAC9-221ENST00000471887 ADH5P11766 374 aa8.85□□□□□ -0.99
HDAC9-221ENST00000471887 LIG1P18858 919 aa8.85□□□□□ -0.99
HDAC9-221ENST00000471887 SOX4Q06945 474 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-221ENST00000471887 AKAP4Q5JQC9 854 aa8.85□□□□□ -0.99
HDAC9-221ENST00000471887 TTBK2Q6IQ55 1244 aa8.85□□□□□ -0.99
HDAC9-221ENST00000471887 LLGL2Q6P1M3 1020 aa8.85□□□□□ -0.99
HDAC9-221ENST00000471887 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.85□□□□□ -0.99
HDAC9-221ENST00000471887 MYRFLQ96LU7 910 aa8.85□□□□□ -0.99
HDAC9-221ENST00000471887 WDR18Q9BV38 432 aa8.85□□□□□ -0.99
HDAC9-221ENST00000471887 DHX15O43143 795 aaKnown RBP8.84□□□□□ -0.99
HDAC9-221ENST00000471887 ZNF862O60290 1169 aa8.84□□□□□ -0.99
HDAC9-221ENST00000471887 FURINP09958 794 aa8.84□□□□□ -0.99
HDAC9-221ENST00000471887 H2AFB1P0C5Y9 115 aa8.84□□□□□ -0.99
HDAC9-221ENST00000471887 H2AFB2P0C5Z0 115 aa8.84□□□□□ -0.99
HDAC9-221ENST00000471887 SLFN14P0C7P3 912 aa8.84□□□□□ -0.99
HDAC9-221ENST00000471887 RLBP1P12271 317 aa8.84□□□□□ -0.99
HDAC9-221ENST00000471887 DRD2P14416 443 aa8.84□□□□□ -0.99
HDAC9-221ENST00000471887 RSPO4Q2I0M5 234 aaPredicted RBP8.84□□□□□ -0.99
HDAC9-221ENST00000471887 KIF4BQ2VIQ3 1234 aa8.84□□□□□ -0.99
HDAC9-221ENST00000471887 NKAPLQ5M9Q1 402 aa8.84□□□□□ -0.99
HDAC9-221ENST00000471887 ARMC10Q8N2F6 343 aa8.84□□□□□ -0.99
HDAC9-221ENST00000471887 GRIN3AQ8TCU5 1115 aa8.84□□□□□ -0.99
HDAC9-221ENST00000471887 HIF3AQ9Y2N7 669 aa8.84□□□□□ -0.99
HDAC9-221ENST00000471887 TRIM37O94972 964 aa8.83□□□□□ -1
HDAC9-221ENST00000471887 SCARA3Q6AZY7 606 aa8.83□□□□□ -1
HDAC9-221ENST00000471887 PRR23CQ6ZRP0 262 aa8.83□□□□□ -1
HDAC9-221ENST00000471887 WDR89Q96FK6 387 aaPredicted RBP8.83□□□□□ -1
HDAC9-221ENST00000471887 ACSBG1Q96GR2 724 aa8.83□□□□□ -1
HDAC9-221ENST00000471887 AP4E1Q9UPM8 1137 aa8.83□□□□□ -1
HDAC9-221ENST00000471887 LMNB1P20700 586 aa8.82□□□□□ -1
HDAC9-221ENST00000471887 RPS26P62854 115 aaKnown RBP8.82□□□□□ -1
HDAC9-221ENST00000471887 C2CD4AQ8NCU7 369 aaPredicted RBP8.82□□□□□ -1
HDAC9-221ENST00000471887 GPBAR1Q8TDU6 330 aa8.82□□□□□ -1
HDAC9-221ENST00000471887 BMP3P12645 472 aa8.81□□□□□ -1
HDAC9-221ENST00000471887 LIG3P49916 1009 aa8.81□□□□□ -1
HDAC9-221ENST00000471887 USP11P51784 963 aa8.81□□□□□ -1
HDAC9-221ENST00000471887 MAP3K11Q16584 847 aa8.81□□□□□ -1
HDAC9-221ENST00000471887 RASIP1Q5U651 963 aa8.81□□□□□ -1
HDAC9-221ENST00000471887 DYMQ7RTS9 669 aa8.81□□□□□ -1
HDAC9-221ENST00000471887 FAM20CQ8IXL6 584 aa8.81□□□□□ -1
HDAC9-221ENST00000471887 CACNA2D2Q9NY47 1150 aa8.81□□□□□ -1
HDAC9-221ENST00000471887 RAXQ9Y2V3 346 aa8.81□□□□□ -1
HDAC9-221ENST00000471887 TMPRSS2O15393 492 aa8.8□□□□□ -1
HDAC9-221ENST00000471887 DYRK3O43781 588 aa8.8□□□□□ -1
HDAC9-221ENST00000471887 ID3Q02535 119 aa8.8□□□□□ -1
HDAC9-221ENST00000471887 MPRIPQ6WCQ1 1025 aa8.8□□□□□ -1
HDAC9-221ENST00000471887 YIPF2Q9BWQ6 316 aa8.8□□□□□ -1
HDAC9-221ENST00000471887 KCNF1Q9H3M0 494 aa8.8□□□□□ -1
HDAC9-221ENST00000471887 STOML1Q9UBI4 398 aa8.8□□□□□ -1
HDAC9-221ENST00000471887 PPP1R9AQ9ULJ8 1098 aa8.8□□□□□ -1
HDAC9-221ENST00000471887 ACTL7BQ9Y614 415 aa8.8□□□□□ -1
HDAC9-221ENST00000471887 AGMOQ6ZNB7 445 aa8.79□□□□□ -1
HDAC9-221ENST00000471887 TMEM87AQ8NBN3 555 aa8.79□□□□□ -1
HDAC9-221ENST00000471887 ATXN3LQ9H3M9 355 aa8.79□□□□□ -1
HDAC9-221ENST00000471887 CRIM1Q9NZV1 1036 aa8.79□□□□□ -1
HDAC9-221ENST00000471887 PCDHGC5Q9Y5F6 944 aa8.79□□□□□ -1
HDAC9-221ENST00000471887 K7ELQ4 463 aaPredicted RBP8.78□□□□□ -1
HDAC9-221ENST00000471887 MAP4P27816 1152 aaKnown RBP8.78□□□□□ -1
HDAC9-221ENST00000471887 RXRBP28702 533 aa8.78□□□□□ -1
HDAC9-221ENST00000471887 ASPAP45381 313 aa8.78□□□□□ -1
HDAC9-221ENST00000471887 SGO2Q562F6 1265 aa8.78□□□□□ -1
HDAC9-221ENST00000471887 BEND4Q6ZU67 534 aa8.78□□□□□ -1
HDAC9-221ENST00000471887 CLEC10AQ8IUN9 316 aa8.78□□□□□ -1
HDAC9-221ENST00000471887 BACH2Q9BYV9 841 aa8.78□□□□□ -1
HDAC9-221ENST00000471887 SEMA6BQ9H3T3 888 aa8.78□□□□□ -1
HDAC9-221ENST00000471887 GSX1Q9H4S2 264 aaPredicted RBP8.78□□□□□ -1
HDAC9-221ENST00000471887 PCDHA4Q9UN74 947 aa8.78□□□□□ -1
HDAC9-221ENST00000471887 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-221ENST00000471887 VAMP1P23763 118 aa8.77□□□□□ -1.01
HDAC9-221ENST00000471887 PWP1Q13610 501 aa8.77□□□□□ -1.01
HDAC9-221ENST00000471887 TSNAXIP1Q2TAA8 658 aa8.77□□□□□ -1.01
HDAC9-221ENST00000471887 ZC3H12AQ5D1E8 599 aaKnown RBP8.77□□□□□ -1.01
HDAC9-221ENST00000471887 CDPF1Q6NVV7 123 aa8.77□□□□□ -1.01
HDAC9-221ENST00000471887 RELL1Q8IUW5 271 aa8.77□□□□□ -1.01
HDAC9-221ENST00000471887 MRRFQ96E11 262 aaKnown RBP8.77□□□□□ -1.01
HDAC9-221ENST00000471887 FANCD2OSQ96PS1 177 aa8.77□□□□□ -1.01
HDAC9-221ENST00000471887 FAM83CQ9BQN1 747 aa8.77□□□□□ -1.01
HDAC9-221ENST00000471887 FAM105AQ9NUU6 356 aa8.77□□□□□ -1.01
HDAC9-221ENST00000471887 RAB6AP20340 208 aa8.76□□□□□ -1.01
HDAC9-221ENST00000471887 FBLIM1Q8WUP2 373 aa8.76□□□□□ -1.01
HDAC9-221ENST00000471887 GAL3ST3Q96A11 431 aa8.76□□□□□ -1.01
HDAC9-221ENST00000471887 RSRP1Q9BUV0 290 aa8.76□□□□□ -1.01
HDAC9-221ENST00000471887 MIR1-1HGQ9H1L0 117 aa8.76□□□□□ -1.01
HDAC9-221ENST00000471887 PIDD1Q9HB75 910 aa8.76□□□□□ -1.01
HDAC9-221ENST00000471887 TLR6Q9Y2C9 796 aa8.76□□□□□ -1.01
HDAC9-221ENST00000471887 FAM95CA0A1B0GW59 222 aa8.75□□□□□ -1.01
HDAC9-221ENST00000471887 TFE3P19532 575 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-221ENST00000471887 ERVK-24P63145 666 aa8.75□□□□□ -1.01
HDAC9-221ENST00000471887 HS2ST1Q7LGA3 356 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms