RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 NOL10Q9BSC4 688 aaKnown RBP18.36■□□□□ 0.53
SNX13-205ENST00000471744 GPR75-ASB3A0A0A6YYF3 556 aa18.35■□□□□ 0.53
SNX13-205ENST00000471744 TMEM88BA6NKF7 163 aa18.35■□□□□ 0.53
SNX13-205ENST00000471744 GOLIM4O00461 696 aa18.35■□□□□ 0.53
SNX13-205ENST00000471744 TRAF5O00463 557 aa18.35■□□□□ 0.53
SNX13-205ENST00000471744 NF2P35240 595 aa18.35■□□□□ 0.53
SNX13-205ENST00000471744 B4GALNT3Q6L9W6 998 aa18.35■□□□□ 0.53
SNX13-205ENST00000471744 CERS3Q8IU89 383 aa18.35■□□□□ 0.53
SNX13-205ENST00000471744 LNPKQ9C0E8 428 aa18.35■□□□□ 0.53
SNX13-205ENST00000471744 DEFB129Q9H1M3 183 aa18.35■□□□□ 0.53
SNX13-205ENST00000471744 CREBZFQ9NS37 354 aa18.35■□□□□ 0.53
SNX13-205ENST00000471744 SALL3Q9BXA9 1300 aa18.34■□□□□ 0.53
SNX13-205ENST00000471744 AK9Q5TCS8 1911 aa18.34■□□□□ 0.53
SNX13-205ENST00000471744 CELF2O95319 508 aaKnown RBP18.34■□□□□ 0.53
SNX13-205ENST00000471744 BAG3O95817 575 aa18.34■□□□□ 0.53
SNX13-205ENST00000471744 PLCG2P16885 1265 aa18.34■□□□□ 0.53
SNX13-205ENST00000471744 ZNF384Q8TF68 577 aa18.34■□□□□ 0.53
SNX13-205ENST00000471744 CDCA5Q96FF9 252 aa18.34■□□□□ 0.53
SNX13-205ENST00000471744 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.34■□□□□ 0.53
SNX13-205ENST00000471744 ANTXR1Q9H6X2 564 aa18.34■□□□□ 0.53
SNX13-205ENST00000471744 STAP2Q9UGK3 403 aa18.34■□□□□ 0.53
SNX13-205ENST00000471744 NDUFB9Q9Y6M9 179 aa18.34■□□□□ 0.53
SNX13-205ENST00000471744 AOX1Q06278 1338 aa18.33■□□□□ 0.53
SNX13-205ENST00000471744 BTDP43251 543 aa18.33■□□□□ 0.52
SNX13-205ENST00000471744 ERICH6BQ5W0A0 696 aa18.33■□□□□ 0.52
SNX13-205ENST00000471744 CDC42EP5Q6NZY7 148 aa18.33■□□□□ 0.52
SNX13-205ENST00000471744 FAM83AQ86UY5 434 aa18.33■□□□□ 0.52
SNX13-205ENST00000471744 USP40Q9NVE5 1235 aa18.33■□□□□ 0.52
SNX13-205ENST00000471744 PDE1AP54750 535 aa18.32■□□□□ 0.52
SNX13-205ENST00000471744 RASA3Q14644 834 aa18.32■□□□□ 0.52
SNX13-205ENST00000471744 LRRFIP1Q32MZ4 808 aaKnown RBP18.32■□□□□ 0.52
SNX13-205ENST00000471744 ZSCAN25Q6NSZ9 544 aa18.32■□□□□ 0.52
SNX13-205ENST00000471744 PI4K2BQ8TCG2 481 aa18.32■□□□□ 0.52
SNX13-205ENST00000471744 OTUD7AQ8TE49 926 aaPredicted RBP18.32■□□□□ 0.52
SNX13-205ENST00000471744 RPAP1Q9BWH6 1393 aaPredicted RBP18.31■□□□□ 0.52
SNX13-205ENST00000471744 TCP10L2B9ZVM9 353 aa18.31■□□□□ 0.52
SNX13-205ENST00000471744 CYP7A1P22680 504 aa18.31■□□□□ 0.52
SNX13-205ENST00000471744 PPP4CP60510 307 aa18.31■□□□□ 0.52
SNX13-205ENST00000471744 FKBP1BP68106 108 aa18.31■□□□□ 0.52
SNX13-205ENST00000471744 SUPT20HL1Q3ZLR7 823 aa18.31■□□□□ 0.52
SNX13-205ENST00000471744 CST9Q5W186 159 aa18.31■□□□□ 0.52
SNX13-205ENST00000471744 MAGEB6Q8N7X4 407 aa18.31■□□□□ 0.52
SNX13-205ENST00000471744 C2orf69Q8N8R5 385 aa18.31■□□□□ 0.52
SNX13-205ENST00000471744 IDI2Q9BXS1 227 aa18.31■□□□□ 0.52
SNX13-205ENST00000471744 ZNF408Q9H9D4 720 aa18.31■□□□□ 0.52
SNX13-205ENST00000471744 PAPPA2Q9BXP8 1791 aa18.31■□□□□ 0.52
SNX13-205ENST00000471744 FMR1Q06787 632 aaKnown RBP eCLIP18.3■□□□□ 0.52
SNX13-205ENST00000471744 SLC9C2Q5TAH2 1124 aa18.3■□□□□ 0.52
SNX13-205ENST00000471744 TSHZ3Q63HK5 1081 aa18.3■□□□□ 0.52
SNX13-205ENST00000471744 HOOK2Q96ED9 719 aa18.3■□□□□ 0.52
SNX13-205ENST00000471744 GBA2Q9HCG7 927 aaPredicted RBP18.3■□□□□ 0.52
SNX13-205ENST00000471744 SCAF8Q9UPN6 1271 aaKnown RBP18.3■□□□□ 0.52
SNX13-205ENST00000471744 CDK5RAP2Q96SN8 1893 aa18.29■□□□□ 0.52
SNX13-205ENST00000471744 FOCADQ5VW36 1801 aa18.29■□□□□ 0.52
SNX13-205ENST00000471744 ENTPD3O75355 529 aa18.29■□□□□ 0.52
SNX13-205ENST00000471744 PDE6AP16499 860 aa18.29■□□□□ 0.52
SNX13-205ENST00000471744 CACNB3P54284 484 aa18.29■□□□□ 0.52
SNX13-205ENST00000471744 RHBDL3P58872 404 aa18.29■□□□□ 0.52
SNX13-205ENST00000471744 CENPQQ7L2Z9 268 aaPredicted RBP18.29■□□□□ 0.52
SNX13-205ENST00000471744 KBTBD3Q8NAB2 608 aa18.29■□□□□ 0.52
SNX13-205ENST00000471744 FAM151AQ8WW52 585 aa18.29■□□□□ 0.52
SNX13-205ENST00000471744 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
SNX13-205ENST00000471744 OSBPL3Q9H4L5 887 aa18.29■□□□□ 0.52
SNX13-205ENST00000471744 UBE3CQ15386 1083 aa18.28■□□□□ 0.52
SNX13-205ENST00000471744 AATFQ9NY61 560 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNX13-205ENST00000471744 ABT1Q9ULW3 272 aaKnown RBP18.28■□□□□ 0.52
SNX13-205ENST00000471744 TLL2Q9Y6L7 1015 aa18.28■□□□□ 0.52
SNX13-205ENST00000471744 CNTNAP1P78357 1384 aa18.28■□□□□ 0.52
SNX13-205ENST00000471744 RFX7Q2KHR2 1363 aa18.28■□□□□ 0.52
SNX13-205ENST00000471744 PPP1R12BO60237 982 aaPredicted RBP18.27■□□□□ 0.52
SNX13-205ENST00000471744 ZFYP08048 801 aaPredicted RBP18.27■□□□□ 0.52
SNX13-205ENST00000471744 ADD2P35612 726 aa18.27■□□□□ 0.52
SNX13-205ENST00000471744 PRAMEF18Q5VWM3 479 aa18.27■□□□□ 0.52
SNX13-205ENST00000471744 DLK2Q6UY11 383 aa18.27■□□□□ 0.52
SNX13-205ENST00000471744 ARMC9Q7Z3E5 817 aa18.27■□□□□ 0.52
SNX13-205ENST00000471744 ADGRA1Q86SQ6 560 aa18.27■□□□□ 0.52
SNX13-205ENST00000471744 TICAM2Q86XR7 235 aa18.27■□□□□ 0.52
SNX13-205ENST00000471744 PLEKHM2Q8IWE5 1019 aa18.27■□□□□ 0.52
SNX13-205ENST00000471744 TEX11Q8IYF3 940 aa18.27■□□□□ 0.52
SNX13-205ENST00000471744 HHIPL1Q96JK4 782 aa18.27■□□□□ 0.52
SNX13-205ENST00000471744 CCDC136Q96JN2 1154 aa18.27■□□□□ 0.52
SNX13-205ENST00000471744 TMEM39BQ9GZU3 492 aa18.27■□□□□ 0.52
SNX13-205ENST00000471744 ZNF532Q9HCE3 1301 aa18.26■□□□□ 0.51
SNX13-205ENST00000471744 WDHD1O75717 1129 aaPredicted RBP18.26■□□□□ 0.51
SNX13-205ENST00000471744 RGS3P49796 1198 aa18.26■□□□□ 0.51
SNX13-205ENST00000471744 NFIAQ12857 509 aa18.26■□□□□ 0.51
SNX13-205ENST00000471744 SAPCD2Q86UD0 394 aa18.26■□□□□ 0.51
SNX13-205ENST00000471744 EVI5LQ96CN4 794 aa18.26■□□□□ 0.51
SNX13-205ENST00000471744 TEPSINQ96N21 525 aa18.26■□□□□ 0.51
SNX13-205ENST00000471744 FAM198AQ9UFP1 575 aa18.26■□□□□ 0.51
SNX13-205ENST00000471744 CEP350Q5VT06 3117 aa18.26■□□□□ 0.51
SNX13-205ENST00000471744 COL2A1P02458 1487 aaPredicted RBP18.26■□□□□ 0.51
SNX13-205ENST00000471744 MAGEB6P1A0A0J9YX57 407 aa18.25■□□□□ 0.51
SNX13-205ENST00000471744 TCRBV5S4A2TA0A5A2 114 aa18.25■□□□□ 0.51
SNX13-205ENST00000471744 RASSF10A6NK89 507 aa18.25■□□□□ 0.51
SNX13-205ENST00000471744 TCP10Q12799 353 aa18.25■□□□□ 0.51
SNX13-205ENST00000471744 TTLL12Q14166 644 aaPredicted RBP18.25■□□□□ 0.51
SNX13-205ENST00000471744 NBPF12Q5TAG4 269 aaPredicted RBP18.25■□□□□ 0.51
SNX13-205ENST00000471744 SH3RF3Q8TEJ3 882 aaPredicted RBP18.25■□□□□ 0.51
SNX13-205ENST00000471744 MYH1P12882 1939 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms