RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PARP1P09874 1014 aaKnown RBP14.82□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 SMTNP53814 917 aa14.82□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 FBXW4P57775 412 aa14.82□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 PDE1CQ14123 709 aaPredicted RBP14.82□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 ZNF174Q15697 407 aa14.82□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 ACBD5Q5T8D3 534 aaPredicted RBP14.82□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 GNA11P29992 359 aa14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 MEIS3Q99687 375 aa14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 RHPN1Q8TCX5 695 aa14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 IFT74Q96LB3 600 aa14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 MBIPQ9NS73 344 aa14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 IRS4O14654 1257 aaPredicted RBP14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 TEX11Q8IYF3 940 aa14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 RIOK1Q9BRS2 568 aaKnown RBP14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.81□□□□□ -0.044e-7■■■■■ 44
NPHP3-ACAD11-201ENST00000471702 DACT1Q9NYF0 836 aa14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 EPB41P11171 864 aaKnown RBP14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CCDC121Q6ZUS5 278 aa14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 SKA2Q8WVK7 121 aaPredicted RBP14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 RAB3IPQ96QF0 476 aaPredicted RBP14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 NKTRP30414 1462 aaKnown RBP14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 LRRC59Q96AG4 307 aaKnown RBP14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 TTC14Q96N46 770 aa14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 TRIM31Q9BZY9 425 aa14.81□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CALCOCO2Q13137 446 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CLUL1Q15846 466 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CCDC125Q86Z20 511 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 FAM114A2Q9NRY5 505 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 M0QZ92 97 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 ACEP12821 1306 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 SEL1L2Q5TEA6 688 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 SUPT6HQ7KZ85 1726 aaKnown RBP14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 MTUS1Q9ULD2 1270 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 ZFYP08048 801 aaPredicted RBP14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CDR2Q01850 454 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 TRAPPC3LQ5T215 181 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 TMTC4Q5T4D3 741 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 KIFAP3Q92845 792 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 ZSCAN22P10073 491 aaPredicted RBP14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 PLCG2P16885 1265 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 PPFIA1Q13136 1202 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 VPS18Q9P253 973 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 MTRF1LQ9UGC7 380 aaKnown RBP14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 RTL1A6NKG5 1358 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 UFL1O94874 794 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 PDCD7Q8N8D1 485 aaKnown RBP14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 JAKMIP2Q96AA8 810 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 SMARCA4P51532 1647 aa14.8□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 TMX3Q96JJ7 454 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 BICDL2A1A5D9 508 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 LRRC43Q8N309 656 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 TTC30BQ8N4P2 665 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 BMP15O95972 392 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 PLCB4Q15147 1175 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 USP48Q86UV5 1035 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 NSMCE1Q8WV22 266 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 MRPS27Q92552 414 aaKnown RBP14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CAPN2P17655 700 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 ALDH3A1P30838 453 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 INPP1P49441 399 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 ZSCAN23Q3MJ62 389 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 STMN2Q93045 179 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 PLEKHH2Q8IVE3 1493 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 SDSP20132 328 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 LARGE2Q8N3Y3 721 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 EYA3Q99504 573 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 KRT83P78385 493 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CCDC186Q7Z3E2 898 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 NUF2Q9BZD4 464 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 ARHGEF10LQ9HCE6 1279 aa14.79□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CCDC171Q6TFL3 1326 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 SPTLC2O15270 562 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 PPFIBP2Q8ND30 876 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 RABEP2Q9H5N1 569 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 IGF1RP08069 1367 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CEP85LQ5SZL2 805 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 PAGR1Q9BTK6 254 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 PSMB7Q99436 277 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 ERICH3Q5RHP9 1530 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CWF19L2Q2TBE0 894 aaKnown RBP14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CCDC122Q5T0U0 273 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 GKAP1Q5VSY0 366 aaPredicted RBP14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 SPC25Q9HBM1 224 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CTNND2Q9UQB3 1225 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 DCUN1D2Q6PH85 259 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 DCLK2Q8N568 766 aa14.78□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 NUCB1Q02818 461 aa14.77□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 INTS8Q75QN2 995 aaKnown RBP14.77□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 ST7Q9NRC1 585 aa14.77□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 PAXBP1Q9Y5B6 917 aa14.77□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 STK10O94804 968 aaKnown RBP14.77□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CD19P15391 556 aa14.77□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 SETDB1Q15047 1291 aa14.77□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CNBD1Q8NA66 436 aa14.77□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 RDH13Q8NBN7 331 aa14.77□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 CHMP6Q96FZ7 201 aa14.77□□□□□ -0.04
NPHP3-ACAD11-201ENST00000471702 HAUS2Q9NVX0 235 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms