RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 OGFOD1Q8N543 542 aa23.04■■□□□ 1.28
PSPC1-203ENST00000471658 DPF2Q92785 391 aa23.04■■□□□ 1.28
PSPC1-203ENST00000471658 ZDHHC15Q96MV8 337 aa23.04■■□□□ 1.28
PSPC1-203ENST00000471658 HDAC9Q9UKV0 1011 aa23.04■■□□□ 1.28
PSPC1-203ENST00000471658 MICALL2Q8IY33 904 aa23.03■■□□□ 1.28
PSPC1-203ENST00000471658 PRMT6Q96LA8 375 aaPredicted RBP23.03■■□□□ 1.28
PSPC1-203ENST00000471658 EGFRP00533 1210 aa23.02■■□□□ 1.28
PSPC1-203ENST00000471658 HSPD1P10809 573 aaKnown RBP23.02■■□□□ 1.28
PSPC1-203ENST00000471658 RHBDL3P58872 404 aa23.02■■□□□ 1.28
PSPC1-203ENST00000471658 SLC4A4Q9Y6R1 1079 aa23.02■■□□□ 1.28
PSPC1-203ENST00000471658 BAG3O95817 575 aa23.01■■□□□ 1.27
PSPC1-203ENST00000471658 ZNF280AP59817 542 aaPredicted RBP23.01■■□□□ 1.27
PSPC1-203ENST00000471658 RBM26Q5T8P6 1007 aaKnown RBP23.01■■□□□ 1.27
PSPC1-203ENST00000471658 KIAA1211Q6ZU35 1233 aa23.01■■□□□ 1.27
PSPC1-203ENST00000471658 SDR42E1Q8WUS8 393 aa23.01■■□□□ 1.27
PSPC1-203ENST00000471658 NOL10Q9BSC4 688 aaKnown RBP23.01■■□□□ 1.27
PSPC1-203ENST00000471658 USP26Q9BXU7 913 aa23.01■■□□□ 1.27
PSPC1-203ENST00000471658 REC8O95072 547 aa23■■□□□ 1.27
PSPC1-203ENST00000471658 CDC42EP5Q6NZY7 148 aa23■■□□□ 1.27
PSPC1-203ENST00000471658 SAMD7Q7Z3H4 446 aa23■■□□□ 1.27
PSPC1-203ENST00000471658 MYOZ2Q9NPC6 264 aa23■■□□□ 1.27
PSPC1-203ENST00000471658 USP40Q9NVE5 1235 aa23■■□□□ 1.27
PSPC1-203ENST00000471658 GSG1L2A8MUP6 293 aa23■■□□□ 1.27
PSPC1-203ENST00000471658 EPS15P42566 896 aa23■■□□□ 1.27
PSPC1-203ENST00000471658 DLGAP5Q15398 846 aa23■■□□□ 1.27
PSPC1-203ENST00000471658 DPY19L2Q6NUT2 758 aa23■■□□□ 1.27
PSPC1-203ENST00000471658 TDRD3Q9H7E2 651 aaKnown RBP23■■□□□ 1.27
PSPC1-203ENST00000471658 GPRC5DQ9NZD1 345 aa23■■□□□ 1.27
PSPC1-203ENST00000471658 PATL2C9JE40 543 aaKnown RBP22.99■■□□□ 1.27
PSPC1-203ENST00000471658 TBC1D10BQ4KMP7 808 aaPredicted RBP22.99■■□□□ 1.27
PSPC1-203ENST00000471658 TEX11Q8IYF3 940 aa22.99■■□□□ 1.27
PSPC1-203ENST00000471658 MAP4K1Q92918 833 aa22.99■■□□□ 1.27
PSPC1-203ENST00000471658 EPB41L4AQ9HCS5 686 aaPredicted RBP22.99■■□□□ 1.27
PSPC1-203ENST00000471658 ZC3H4Q9UPT8 1303 aaKnown RBP22.98■■□□□ 1.27
PSPC1-203ENST00000471658 GLTPD2A6NH11 291 aa22.98■■□□□ 1.27
PSPC1-203ENST00000471658 SPDYE2BA6NHP3 402 aa22.98■■□□□ 1.27
PSPC1-203ENST00000471658 APPP05067 770 aa22.98■■□□□ 1.27
PSPC1-203ENST00000471658 SPDYE6P0CI01 402 aa22.98■■□□□ 1.27
PSPC1-203ENST00000471658 ZBED3Q96IU2 234 aaPredicted RBP22.98■■□□□ 1.27
PSPC1-203ENST00000471658 CRNKL1Q9BZJ0 848 aaKnown RBP22.98■■□□□ 1.27
PSPC1-203ENST00000471658 CACNB3P54284 484 aa22.97■■□□□ 1.27
PSPC1-203ENST00000471658 NBPF9Q3BBW0 867 aa22.97■■□□□ 1.27
PSPC1-203ENST00000471658 TGFBRAP1Q8WUH2 860 aa22.97■■□□□ 1.27
PSPC1-203ENST00000471658 DSCC1Q9BVC3 393 aa22.97■■□□□ 1.27
PSPC1-203ENST00000471658 H7C1D1 291 aa22.97■■□□□ 1.27
PSPC1-203ENST00000471658 GNAT2P19087 354 aa22.97■■□□□ 1.27
PSPC1-203ENST00000471658 IFNL3Q8IZI9 196 aa22.97■■□□□ 1.27
PSPC1-203ENST00000471658 MTMR14Q8NCE2 650 aa22.97■■□□□ 1.27
PSPC1-203ENST00000471658 RBM8AQ9Y5S9 174 aaKnown RBP22.97■■□□□ 1.27
PSPC1-203ENST00000471658 WNT10BO00744 389 aa22.96■■□□□ 1.27
PSPC1-203ENST00000471658 FGAP02671 866 aa22.96■■□□□ 1.27
PSPC1-203ENST00000471658 PLCG2P16885 1265 aa22.96■■□□□ 1.27
PSPC1-203ENST00000471658 MAPKAPK5Q8IW41 473 aa22.96■■□□□ 1.27
PSPC1-203ENST00000471658 TRPM4Q8TD43 1214 aa22.96■■□□□ 1.27
PSPC1-203ENST00000471658 CLRN2A0PK11 232 aa22.95■■□□□ 1.26
PSPC1-203ENST00000471658 WDHD1O75717 1129 aaPredicted RBP22.95■■□□□ 1.26
PSPC1-203ENST00000471658 USP5P45974 858 aa22.95■■□□□ 1.26
PSPC1-203ENST00000471658 DDX4Q9NQI0 724 aaKnown RBP22.95■■□□□ 1.26
PSPC1-203ENST00000471658 ASTN2O75129 1339 aaPredicted RBP22.94■■□□□ 1.26
PSPC1-203ENST00000471658 NFIAQ12857 509 aa22.94■■□□□ 1.26
PSPC1-203ENST00000471658 KIF4BQ2VIQ3 1234 aa22.94■■□□□ 1.26
PSPC1-203ENST00000471658 DCP1AQ9NPI6 582 aaPredicted RBP22.94■■□□□ 1.26
PSPC1-203ENST00000471658 ZNF70Q9UC06 446 aaPredicted RBP22.94■■□□□ 1.26
PSPC1-203ENST00000471658 MMP14P50281 582 aa22.93■■□□□ 1.26
PSPC1-203ENST00000471658 PICALMQ13492 652 aa22.93■■□□□ 1.26
PSPC1-203ENST00000471658 L3MBTL3Q96JM7 780 aaPredicted RBP22.93■■□□□ 1.26
PSPC1-203ENST00000471658 MKRN1Q9UHC7 482 aaKnown RBP22.93■■□□□ 1.26
PSPC1-203ENST00000471658 SMIM22K7EJ46 135 aa22.93■■□□□ 1.26
PSPC1-203ENST00000471658 EIF5BO60841 1220 aaKnown RBP22.93■■□□□ 1.26
PSPC1-203ENST00000471658 LMOD1P29536 600 aaPredicted RBP22.93■■□□□ 1.26
PSPC1-203ENST00000471658 HIRAP54198 1017 aaPredicted RBP22.93■■□□□ 1.26
PSPC1-203ENST00000471658 EVX2Q03828 476 aa22.93■■□□□ 1.26
PSPC1-203ENST00000471658 NECTIN1Q15223 517 aa22.93■■□□□ 1.26
PSPC1-203ENST00000471658 ALX1Q15699 326 aa22.93■■□□□ 1.26
PSPC1-203ENST00000471658 CERS3Q8IU89 383 aa22.93■■□□□ 1.26
PSPC1-203ENST00000471658 C22orf23Q9BZE7 217 aa22.93■■□□□ 1.26
PSPC1-203ENST00000471658 ATP8A2Q9NTI2 1148 aa22.93■■□□□ 1.26
PSPC1-203ENST00000471658 TAF6LQ9Y6J9 622 aa22.93■■□□□ 1.26
PSPC1-203ENST00000471658 U3KPZ7 1027 aaPredicted RBP22.93■■□□□ 1.26
PSPC1-203ENST00000471658 POTECB2RU33 542 aa22.92■■□□□ 1.26
PSPC1-203ENST00000471658 TDO2P48775 406 aa22.92■■□□□ 1.26
PSPC1-203ENST00000471658 SLC4A8Q2Y0W8 1093 aa22.92■■□□□ 1.26
PSPC1-203ENST00000471658 SPDYE2Q495Y8 402 aa22.92■■□□□ 1.26
PSPC1-203ENST00000471658 ZFPM1Q8IX07 1006 aa22.92■■□□□ 1.26
PSPC1-203ENST00000471658 NAPBQ9H115 298 aa22.92■■□□□ 1.26
PSPC1-203ENST00000471658 SAP30BPQ9UHR5 308 aaKnown RBP22.92■■□□□ 1.26
PSPC1-203ENST00000471658 PALD1Q9ULE6 856 aa22.92■■□□□ 1.26
PSPC1-203ENST00000471658 SCAF8Q9UPN6 1271 aaKnown RBP22.92■■□□□ 1.26
PSPC1-203ENST00000471658 CYP2D7A0A087X1C5 515 aa22.91■■□□□ 1.26
PSPC1-203ENST00000471658 HAND2P61296 217 aa22.91■■□□□ 1.26
PSPC1-203ENST00000471658 NACAP1Q9BZK3 213 aa22.91■■□□□ 1.26
PSPC1-203ENST00000471658 UPF2Q9HAU5 1272 aaKnown RBP22.91■■□□□ 1.26
PSPC1-203ENST00000471658 FAM198AQ9UFP1 575 aa22.91■■□□□ 1.26
PSPC1-203ENST00000471658 RPAP1Q9BWH6 1393 aaPredicted RBP22.91■■□□□ 1.26
PSPC1-203ENST00000471658 FLT1P17948 1338 aa22.91■■□□□ 1.26
PSPC1-203ENST00000471658 TCP10L2B9ZVM9 353 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 SLC27A2O14975 620 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 CYP2D6P10635 497 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 HSPA4P34932 840 aa22.9■■□□□ 1.26
PSPC1-203ENST00000471658 TCP10Q12799 353 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms