RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 GREM2Q9H772 168 aa11.3□□□□□ -0.6
XRN1-208ENST00000470537 ADAMTS8Q9UP79 889 aa11.3□□□□□ -0.6
XRN1-208ENST00000470537 MKI67P46013 3256 aaKnown RBP11.29□□□□□ -0.6
XRN1-208ENST00000470537 PI4KAP2A4QPH2 592 aa11.29□□□□□ -0.6
XRN1-208ENST00000470537 FKBP1AP62942 108 aaKnown RBP11.29□□□□□ -0.6
XRN1-208ENST00000470537 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
XRN1-208ENST00000470537 PI4KAP1Q8N8J0 262 aa11.29□□□□□ -0.6
XRN1-208ENST00000470537 JARID2Q92833 1246 aaPredicted RBP11.29□□□□□ -0.6
XRN1-208ENST00000470537 ZBED3Q96IU2 234 aaPredicted RBP11.29□□□□□ -0.6
XRN1-208ENST00000470537 WNK4Q96J92 1243 aa11.29□□□□□ -0.6
XRN1-208ENST00000470537 MXD3Q9BW11 206 aa11.29□□□□□ -0.6
XRN1-208ENST00000470537 R3HDMLQ9H3Y0 253 aa11.29□□□□□ -0.6
XRN1-208ENST00000470537 MYH16Q9H6N6 1097 aa11.29□□□□□ -0.6
XRN1-208ENST00000470537 CENPFP49454 3210 aa11.28□□□□□ -0.6
XRN1-208ENST00000470537 ITGA6P23229 1130 aa11.28□□□□□ -0.6
XRN1-208ENST00000470537 TSR1Q2NL82 804 aaKnown RBP11.28□□□□□ -0.6
XRN1-208ENST00000470537 ZNF804AQ7Z570 1209 aa11.28□□□□□ -0.6
XRN1-208ENST00000470537 CD209Q9NNX6 404 aa11.28□□□□□ -0.6
XRN1-208ENST00000470537 TESPA1A2RU30 521 aaPredicted RBP11.27□□□□□ -0.61
XRN1-208ENST00000470537 H7C1W4 665 aa11.27□□□□□ -0.61
XRN1-208ENST00000470537 RBM5P52756 815 aaKnown RBP eCLIP11.27□□□□□ -0.61
XRN1-208ENST00000470537 KIF22Q14807 665 aa11.27□□□□□ -0.61
XRN1-208ENST00000470537 SLC4A8Q2Y0W8 1093 aa11.27□□□□□ -0.61
XRN1-208ENST00000470537 SLC9C1Q4G0N8 1177 aa11.27□□□□□ -0.61
XRN1-208ENST00000470537 C15orf52Q6ZUT6 534 aaKnown RBP11.27□□□□□ -0.61
XRN1-208ENST00000470537 UBE3BQ7Z3V4 1068 aa11.27□□□□□ -0.61
XRN1-208ENST00000470537 PLA2G12BQ9BX93 195 aa11.27□□□□□ -0.61
XRN1-208ENST00000470537 ZFYVE28Q9HCC9 887 aa11.27□□□□□ -0.61
XRN1-208ENST00000470537 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.27□□□□□ -0.61
XRN1-208ENST00000470537 COL4A1P02462 1669 aa11.27□□□□□ -0.61
XRN1-208ENST00000470537 KIAA0100Q14667 2235 aaKnown RBP11.26□□□□□ -0.61
XRN1-208ENST00000470537 ANKRD18BA2A2Z9 1011 aa11.26□□□□□ -0.61
XRN1-208ENST00000470537 WTIPA6NIX2 430 aaPredicted RBP11.26□□□□□ -0.61
XRN1-208ENST00000470537 NEURL1BA8MQ27 555 aa11.26□□□□□ -0.61
XRN1-208ENST00000470537 IGF2BP3O00425 579 aaKnown RBP eCLIP11.26□□□□□ -0.61
XRN1-208ENST00000470537 GNRH1P01148 92 aa11.26□□□□□ -0.61
XRN1-208ENST00000470537 IGKV5-2P06315 115 aa11.26□□□□□ -0.61
XRN1-208ENST00000470537 TNNI2P48788 182 aa11.26□□□□□ -0.61
XRN1-208ENST00000470537 CRHR2Q13324 411 aa11.26□□□□□ -0.61
XRN1-208ENST00000470537 TXNRD3Q86VQ6 643 aa11.26□□□□□ -0.61
XRN1-208ENST00000470537 C8orf58Q8NAV2 365 aa11.26□□□□□ -0.61
XRN1-208ENST00000470537 CD99L2Q8TCZ2 262 aa11.26□□□□□ -0.61
XRN1-208ENST00000470537 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
XRN1-208ENST00000470537 VEZTQ9HBM0 779 aa11.26□□□□□ -0.61
XRN1-208ENST00000470537 APAF1O14727 1248 aa11.25□□□□□ -0.61
XRN1-208ENST00000470537 USP2O75604 605 aaPredicted RBP11.25□□□□□ -0.61
XRN1-208ENST00000470537 CSF1RP07333 972 aa11.25□□□□□ -0.61
XRN1-208ENST00000470537 EN2P19622 333 aaPredicted RBP11.25□□□□□ -0.61
XRN1-208ENST00000470537 GTF2A2P52657 109 aa11.25□□□□□ -0.61
XRN1-208ENST00000470537 CHRNDQ07001 517 aa11.25□□□□□ -0.61
XRN1-208ENST00000470537 IFIT5Q13325 482 aaKnown RBP11.25□□□□□ -0.61
XRN1-208ENST00000470537 RASA3Q14644 834 aa11.25□□□□□ -0.61
XRN1-208ENST00000470537 CFAP100Q494V2 611 aa11.25□□□□□ -0.61
XRN1-208ENST00000470537 HOOK2Q96ED9 719 aa11.25□□□□□ -0.61
XRN1-208ENST00000470537 CLMNQ96JQ2 1002 aa11.25□□□□□ -0.61
XRN1-208ENST00000470537 HTTP42858 3142 aa11.25□□□□□ -0.61
XRN1-208ENST00000470537 MYH3P11055 1940 aa11.25□□□□□ -0.61
XRN1-208ENST00000470537 IL1R1P14778 569 aa11.24□□□□□ -0.61
XRN1-208ENST00000470537 PRMT2P55345 433 aa11.24□□□□□ -0.61
XRN1-208ENST00000470537 GCKRQ14397 625 aa11.24□□□□□ -0.61
XRN1-208ENST00000470537 CWF19L2Q2TBE0 894 aaKnown RBP11.24□□□□□ -0.61
XRN1-208ENST00000470537 NBPF12Q5TAG4 269 aaPredicted RBP11.24□□□□□ -0.61
XRN1-208ENST00000470537 HELBQ8NG08 1087 aaPredicted RBP11.24□□□□□ -0.61
XRN1-208ENST00000470537 OPTNQ96CV9 577 aa11.24□□□□□ -0.61
XRN1-208ENST00000470537 PRMT6Q96LA8 375 aaPredicted RBP11.24□□□□□ -0.61
XRN1-208ENST00000470537 ZCCHC17Q9NP64 241 aaKnown RBP11.24□□□□□ -0.61
XRN1-208ENST00000470537 CSADQ9Y600 493 aa11.24□□□□□ -0.61
XRN1-208ENST00000470537 CLRN2A0PK11 232 aa11.23□□□□□ -0.61
XRN1-208ENST00000470537 SPDYE16A6NNV3 312 aaPredicted RBP11.23□□□□□ -0.61
XRN1-208ENST00000470537 F8W031 263 aaPredicted RBP11.23□□□□□ -0.61
XRN1-208ENST00000470537 FXR1P51114 621 aaKnown RBP eCLIP11.23□□□□□ -0.61
XRN1-208ENST00000470537 TAF1CQ15572 869 aaPredicted RBP11.23□□□□□ -0.61
XRN1-208ENST00000470537 TAF7LQ5H9L4 462 aa11.23□□□□□ -0.61
XRN1-208ENST00000470537 Q6ZNB5 142 aa11.23□□□□□ -0.61
XRN1-208ENST00000470537 LINS1Q8NG48 757 aa11.23□□□□□ -0.61
XRN1-208ENST00000470537 ZNF333Q96JL9 665 aa11.23□□□□□ -0.61
XRN1-208ENST00000470537 SERPINA10Q9UK55 444 aa11.23□□□□□ -0.61
XRN1-208ENST00000470537 PPP4CP60510 307 aa11.22□□□□□ -0.61
XRN1-208ENST00000470537 CCDC57Q2TAC2 916 aa11.22□□□□□ -0.61
XRN1-208ENST00000470537 NKX2-3Q8TAU0 364 aa11.22□□□□□ -0.61
XRN1-208ENST00000470537 PTPN18Q99952 460 aa11.22□□□□□ -0.61
XRN1-208ENST00000470537 ELP3Q9H9T3 547 aa11.22□□□□□ -0.61
XRN1-208ENST00000470537 FZD1Q9UP38 647 aa11.22□□□□□ -0.61
XRN1-208ENST00000470537 RBBP6Q7Z6E9 1792 aaKnown RBP11.21□□□□□ -0.61
XRN1-208ENST00000470537 CCL15-CCL14A0A0B4J2E2 113 aa11.21□□□□□ -0.61
XRN1-208ENST00000470537 CETPP11597 493 aa11.21□□□□□ -0.61
XRN1-208ENST00000470537 KLRK1P26718 216 aa11.21□□□□□ -0.61
XRN1-208ENST00000470537 HOXD10P28358 340 aa11.21□□□□□ -0.61
XRN1-208ENST00000470537 DDX10Q13206 875 aaKnown RBP11.21□□□□□ -0.61
XRN1-208ENST00000470537 FKBP5Q13451 457 aaPredicted RBP11.21□□□□□ -0.61
XRN1-208ENST00000470537 CCL15Q16663 113 aa11.21□□□□□ -0.61
XRN1-208ENST00000470537 TWISTNBQ3B726 338 aaPredicted RBP11.21□□□□□ -0.61
XRN1-208ENST00000470537 LDHAL6AQ6ZMR3 332 aa11.21□□□□□ -0.61
XRN1-208ENST00000470537 CERS5Q8N5B7 392 aa11.21□□□□□ -0.61
XRN1-208ENST00000470537 DNAAF4Q8WXU2 420 aa11.21□□□□□ -0.61
XRN1-208ENST00000470537 CDCA7LQ96GN5 454 aa11.21□□□□□ -0.61
XRN1-208ENST00000470537 CHMP3Q9Y3E7 222 aa11.21□□□□□ -0.61
XRN1-208ENST00000470537 TLR2O60603 784 aa11.2□□□□□ -0.62
XRN1-208ENST00000470537 TAF5LO75529 589 aa11.2□□□□□ -0.62
XRN1-208ENST00000470537 CAPN2P17655 700 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms