RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 CRTC2Q53ET0 693 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-208ENST00000470268 ZMIZ1Q9ULJ6 1067 aa6.01□□□□□ -1.45
SF3B1-208ENST00000470268 LY75O60449 1722 aa6.01□□□□□ -1.45
SF3B1-208ENST00000470268 CICQ96RK0 1608 aaPredicted RBP6.01□□□□□ -1.45
SF3B1-208ENST00000470268 BRD1O95696 1058 aa6.01□□□□□ -1.45
SF3B1-208ENST00000470268 EIF5P55010 431 aaKnown RBP6.01□□□□□ -1.45
SF3B1-208ENST00000470268 AIMP1Q12904 312 aaKnown RBP6.01□□□□□ -1.45
SF3B1-208ENST00000470268 TTLL7Q6ZT98 887 aa6.01□□□□□ -1.45
SF3B1-208ENST00000470268 COPS6Q7L5N1 327 aa6.01□□□□□ -1.45
SF3B1-208ENST00000470268 GPR161Q8N6U8 529 aaKnown RBP6.01□□□□□ -1.45
SF3B1-208ENST00000470268 XAGE3Q8WTP9 111 aa6.01□□□□□ -1.45
SF3B1-208ENST00000470268 CCDC87Q9NVE4 849 aa6.01□□□□□ -1.45
SF3B1-208ENST00000470268 NOVA2Q9UNW9 492 aaKnown RBP6.01□□□□□ -1.45
SF3B1-208ENST00000470268 ZNF831Q5JPB2 1677 aa6.01□□□□□ -1.45
SF3B1-208ENST00000470268 KIF16BQ96L93 1317 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 CNTNAP4Q9C0A0 1308 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 ADCY9O60503 1353 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 LAMB4A4D0S4 1761 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 SPINT1O43278 529 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 KRT76Q01546 638 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 DHX9Q08211 1270 aaKnown RBP6□□□□□ -1.45
SF3B1-208ENST00000470268 USP4Q13107 963 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 FKBP5Q13451 457 aaPredicted RBP6□□□□□ -1.45
SF3B1-208ENST00000470268 ZNF827Q17R98 1081 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 SLC27A3Q5K4L6 730 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 ZKSCAN2Q63HK3 967 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 ATF7IPQ6VMQ6 1270 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 Q6ZVU0 165 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 LARGE2Q8N3Y3 721 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 OGFOD1Q8N543 542 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 PANK1Q8TE04 598 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 ARHGAP45Q92619 1136 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 COL25A1Q9BXS0 654 aaPredicted RBP6□□□□□ -1.45
SF3B1-208ENST00000470268 HYPKQ9NX55 129 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 PCDHB11Q9Y5F2 797 aa6□□□□□ -1.45
SF3B1-208ENST00000470268 COL5A3P25940 1745 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-208ENST00000470268 PI4KAP2A4QPH2 592 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 PATL2C9JE40 543 aaKnown RBP5.99□□□□□ -1.45
SF3B1-208ENST00000470268 IGHA1P01876 353 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 IL6STP40189 918 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-208ENST00000470268 CLDN10P78369 228 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 OXLD1Q5BKU9 147 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 INTS6LQ5JSJ4 861 aaKnown RBP5.99□□□□□ -1.45
SF3B1-208ENST00000470268 PI4KAP1Q8N8J0 262 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 DNAAF2Q9NVR5 837 aaKnown RBP5.99□□□□□ -1.45
SF3B1-208ENST00000470268 PTPRCP08575 1304 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 RPS6KA4O75676 772 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 BAG6P46379 1132 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 TMEM164Q5U3C3 297 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 ANKMY2Q8IV38 441 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 SIX5Q8N196 739 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 TMEM57Q8N5G2 664 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 CCDC155Q8N6L0 562 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 CHMP4AQ9BY43 222 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 MYH14Q7Z406 1995 aaKnown RBP5.99□□□□□ -1.45
SF3B1-208ENST00000470268 RREB1Q92766 1687 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 ABCC4O15439 1325 aa5.99□□□□□ -1.45
SF3B1-208ENST00000470268 C4BP0C0L5 1744 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 SLC35F4A4IF30 521 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 IPO8O15397 1037 aaKnown RBP5.98□□□□□ -1.45
SF3B1-208ENST00000470268 NEFLP07196 543 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 SF3B2Q13435 895 aaKnown RBP5.98□□□□□ -1.45
SF3B1-208ENST00000470268 HLFQ16534 295 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 PPP1R26Q5T8A7 1209 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-208ENST00000470268 ZNF385CQ66K41 422 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-208ENST00000470268 KSR2Q6VAB6 950 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 SV2AQ7L0J3 742 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 DZIP1LQ8IYY4 767 aaKnown RBP5.98□□□□□ -1.45
SF3B1-208ENST00000470268 FAM200AQ8TCP9 573 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 STK32AQ8WU08 396 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 MAP3K2Q9Y2U5 619 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 COL15A1P39059 1388 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 ZBTB7BO15156 539 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-208ENST00000470268 DKK1O94907 266 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 CAMTA2O94983 1202 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 IGKV5-2P06315 115 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 SLURP2P0DP57 97 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 GTF2IP78347 998 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 FOXK2Q01167 660 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 PDE3AQ14432 1141 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 BEND3Q5T5X7 828 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 KANK3Q6NY19 840 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 SLC4A10Q6U841 1118 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-208ENST00000470268 PLBD2Q8NHP8 589 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 DNAAF4Q8WXU2 420 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 CRBNQ96SW2 442 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 API5Q9BZZ5 524 aaKnown RBP5.98□□□□□ -1.45
SF3B1-208ENST00000470268 SRP68Q9UHB9 627 aaKnown RBP5.98□□□□□ -1.45
SF3B1-208ENST00000470268 PCDHGA11Q9Y5H2 935 aa5.98□□□□□ -1.45
SF3B1-208ENST00000470268 TAF1LQ8IZX4 1826 aa5.97□□□□□ -1.45
SF3B1-208ENST00000470268 FIGNL2A6NMB9 653 aa5.97□□□□□ -1.45
SF3B1-208ENST00000470268 ERVH48-1M5A8F1 160 aa5.97□□□□□ -1.45
SF3B1-208ENST00000470268 KCNA1Q09470 495 aa5.97□□□□□ -1.45
SF3B1-208ENST00000470268 CWF19L2Q2TBE0 894 aaKnown RBP5.97□□□□□ -1.45
SF3B1-208ENST00000470268 INTS3Q68E01 1043 aaKnown RBP5.97□□□□□ -1.45
SF3B1-208ENST00000470268 FTSJ3Q8IY81 847 aaKnown RBP5.97□□□□□ -1.45
SF3B1-208ENST00000470268 SVOPQ8N4V2 548 aa5.97□□□□□ -1.45
SF3B1-208ENST00000470268 EXOC6Q8TAG9 804 aa5.97□□□□□ -1.45
SF3B1-208ENST00000470268 PODXL2Q9NZ53 605 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms