RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 PTH1RQ03431 593 aa13.53□□□□□ -0.24
SREBF1-209ENST00000470247 CASC1Q6TDU7 716 aa13.53□□□□□ -0.24
SREBF1-209ENST00000470247 MICALL2Q8IY33 904 aa13.53□□□□□ -0.24
SREBF1-209ENST00000470247 L3MBTL3Q96JM7 780 aaPredicted RBP13.53□□□□□ -0.24
SREBF1-209ENST00000470247 GPRC5DQ9NZD1 345 aa13.53□□□□□ -0.24
SREBF1-209ENST00000470247 TIAM2Q8IVF5 1701 aa13.53□□□□□ -0.24
SREBF1-209ENST00000470247 MAST2Q6P0Q8 1798 aa13.53□□□□□ -0.24
SREBF1-209ENST00000470247 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
SREBF1-209ENST00000470247 GSG1L2A8MUP6 293 aa13.52□□□□□ -0.25
SREBF1-209ENST00000470247 POTECB2RU33 542 aa13.52□□□□□ -0.25
SREBF1-209ENST00000470247 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
SREBF1-209ENST00000470247 EPS15P42566 896 aa13.52□□□□□ -0.25
SREBF1-209ENST00000470247 DPY19L2Q6NUT2 758 aa13.52□□□□□ -0.25
SREBF1-209ENST00000470247 CDC42EP5Q6NZY7 148 aa13.52□□□□□ -0.25
SREBF1-209ENST00000470247 SAMD7Q7Z3H4 446 aa13.52□□□□□ -0.25
SREBF1-209ENST00000470247 OGFOD1Q8N543 542 aa13.52□□□□□ -0.25
SREBF1-209ENST00000470247 SH3RF3Q8TEJ3 882 aaPredicted RBP13.52□□□□□ -0.25
SREBF1-209ENST00000470247 AIDAQ96BJ3 306 aa13.52□□□□□ -0.25
SREBF1-209ENST00000470247 USP26Q9BXU7 913 aa13.52□□□□□ -0.25
SREBF1-209ENST00000470247 HDAC9Q9UKV0 1011 aa13.52□□□□□ -0.25
SREBF1-209ENST00000470247 ADAMTSL1Q8N6G6 1762 aa13.51□□□□□ -0.25
SREBF1-209ENST00000470247 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
SREBF1-209ENST00000470247 BAG3O95817 575 aa13.51□□□□□ -0.25
SREBF1-209ENST00000470247 HSPD1P10809 573 aaKnown RBP13.51□□□□□ -0.25
SREBF1-209ENST00000470247 MAP4K1Q92918 833 aa13.51□□□□□ -0.25
SREBF1-209ENST00000470247 MYOZ2Q9NPC6 264 aa13.51□□□□□ -0.25
SREBF1-209ENST00000470247 MKRN1Q9UHC7 482 aaKnown RBP13.51□□□□□ -0.25
SREBF1-209ENST00000470247 PATL2C9JE40 543 aaKnown RBP13.5□□□□□ -0.25
SREBF1-209ENST00000470247 WNT10BO00744 389 aa13.5□□□□□ -0.25
SREBF1-209ENST00000470247 WDHD1O75717 1129 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-209ENST00000470247 RBM5P52756 815 aaKnown RBP eCLIP13.5□□□□□ -0.25
SREBF1-209ENST00000470247 HIRAP54198 1017 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-209ENST00000470247 DLGAP5Q15398 846 aa13.5□□□□□ -0.25
SREBF1-209ENST00000470247 NBPF9Q3BBW0 867 aa13.5□□□□□ -0.25
SREBF1-209ENST00000470247 TRPM4Q8TD43 1214 aa13.5□□□□□ -0.25
SREBF1-209ENST00000470247 SDR42E1Q8WUS8 393 aa13.5□□□□□ -0.25
SREBF1-209ENST00000470247 DSCC1Q9BVC3 393 aa13.5□□□□□ -0.25
SREBF1-209ENST00000470247 TDRD3Q9H7E2 651 aaKnown RBP13.5□□□□□ -0.25
SREBF1-209ENST00000470247 EPB41L4AQ9HCS5 686 aaPredicted RBP13.5□□□□□ -0.25
SREBF1-209ENST00000470247 USP40Q9NVE5 1235 aa13.5□□□□□ -0.25
SREBF1-209ENST00000470247 H7C1D1 291 aa13.49□□□□□ -0.25
SREBF1-209ENST00000470247 FGAP02671 866 aa13.49□□□□□ -0.25
SREBF1-209ENST00000470247 PLCG2P16885 1265 aa13.49□□□□□ -0.25
SREBF1-209ENST00000470247 MFAP1P55081 439 aaKnown RBP13.49□□□□□ -0.25
SREBF1-209ENST00000470247 ALX1Q15699 326 aa13.49□□□□□ -0.25
SREBF1-209ENST00000470247 RBM26Q5T8P6 1007 aaKnown RBP13.49□□□□□ -0.25
SREBF1-209ENST00000470247 DCP1AQ9NPI6 582 aaPredicted RBP13.49□□□□□ -0.25
SREBF1-209ENST00000470247 ANO2Q9NQ90 1003 aa13.49□□□□□ -0.25
SREBF1-209ENST00000470247 DDX4Q9NQI0 724 aaKnown RBP13.49□□□□□ -0.25
SREBF1-209ENST00000470247 ZNF70Q9UC06 446 aaPredicted RBP13.49□□□□□ -0.25
SREBF1-209ENST00000470247 SLC4A4Q9Y6R1 1079 aa13.49□□□□□ -0.25
SREBF1-209ENST00000470247 RPAP1Q9BWH6 1393 aaPredicted RBP13.48□□□□□ -0.25
SREBF1-209ENST00000470247 ASTN2O75129 1339 aaPredicted RBP13.48□□□□□ -0.25
SREBF1-209ENST00000470247 EPB41L2O43491 1005 aaKnown RBP13.48□□□□□ -0.25
SREBF1-209ENST00000470247 REC8O95072 547 aa13.48□□□□□ -0.25
SREBF1-209ENST00000470247 GNAT2P19087 354 aa13.48□□□□□ -0.25
SREBF1-209ENST00000470247 NFIAQ12857 509 aa13.48□□□□□ -0.25
SREBF1-209ENST00000470247 NECTIN1Q15223 517 aa13.48□□□□□ -0.25
SREBF1-209ENST00000470247 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
SREBF1-209ENST00000470247 TBC1D10BQ4KMP7 808 aaPredicted RBP13.48□□□□□ -0.25
SREBF1-209ENST00000470247 KIAA1211Q6ZU35 1233 aa13.48□□□□□ -0.25
SREBF1-209ENST00000470247 CERS3Q8IU89 383 aa13.48□□□□□ -0.25
SREBF1-209ENST00000470247 TEX11Q8IYF3 940 aa13.48□□□□□ -0.25
SREBF1-209ENST00000470247 IFNL3Q8IZI9 196 aa13.48□□□□□ -0.25
SREBF1-209ENST00000470247 TGFBRAP1Q8WUH2 860 aa13.48□□□□□ -0.25
SREBF1-209ENST00000470247 IDI2Q9BXS1 227 aa13.48□□□□□ -0.25
SREBF1-209ENST00000470247 CRNKL1Q9BZJ0 848 aaKnown RBP13.48□□□□□ -0.25
SREBF1-209ENST00000470247 FAM198AQ9UFP1 575 aa13.48□□□□□ -0.25
SREBF1-209ENST00000470247 CLRN2A0PK11 232 aa13.47□□□□□ -0.25
SREBF1-209ENST00000470247 SMIM22K7EJ46 135 aa13.47□□□□□ -0.25
SREBF1-209ENST00000470247 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
SREBF1-209ENST00000470247 CACNB3P54284 484 aa13.47□□□□□ -0.25
SREBF1-209ENST00000470247 KIF4BQ2VIQ3 1234 aa13.47□□□□□ -0.25
SREBF1-209ENST00000470247 GIMAP6Q6P9H5 292 aa13.47□□□□□ -0.25
SREBF1-209ENST00000470247 ZFPM1Q8IX07 1006 aa13.47□□□□□ -0.25
SREBF1-209ENST00000470247 KCNB2Q92953 911 aa13.47□□□□□ -0.25
SREBF1-209ENST00000470247 NOL10Q9BSC4 688 aaKnown RBP13.47□□□□□ -0.25
SREBF1-209ENST00000470247 ADARB2Q9NS39 739 aaKnown RBP13.47□□□□□ -0.25
SREBF1-209ENST00000470247 ATP8A2Q9NTI2 1148 aa13.47□□□□□ -0.25
SREBF1-209ENST00000470247 RBM8AQ9Y5S9 174 aaKnown RBP13.47□□□□□ -0.25
SREBF1-209ENST00000470247 TAF1DQ9H5J8 278 aaPredicted RBP13.46□□□□□ -0.25
SREBF1-209ENST00000470247 PGAP2Q9UHJ9 254 aa13.46□□□□□ -0.25
SREBF1-209ENST00000470247 HACL1Q9UJ83 578 aa13.46□□□□□ -0.25
SREBF1-209ENST00000470247 ZMYM6O95789 1325 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 FLT1P17948 1338 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 WDR90Q96KV7 1748 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 USP17L12C9JPN9 530 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 USP17L21D6R901 530 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 APPP05067 770 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 LMOD1P29536 600 aaPredicted RBP13.45□□□□□ -0.26
SREBF1-209ENST00000470247 EPHX2P34913 555 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 HSPA4P34932 840 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 EVX2Q03828 476 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 FKBP1CQ5VVH2 108 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 CTR9Q6PD62 1173 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 SH3BP5LQ7L8J4 393 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 MAPKAPK5Q8IW41 473 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 TACC3Q9Y6A5 838 aa13.45□□□□□ -0.26
SREBF1-209ENST00000470247 TAF6LQ9Y6J9 622 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms