RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 TRMT112Q9UI30 125 aaKnown RBP19.5■□□□□ 0.71
PGAP1-208ENST00000470179 DDX60Q8IY21 1712 aaKnown RBP19.5■□□□□ 0.71
PGAP1-208ENST00000470179 TPM3P06753 285 aa19.5■□□□□ 0.71
PGAP1-208ENST00000470179 ATP1A3P13637 1013 aa19.5■□□□□ 0.71
PGAP1-208ENST00000470179 TIMM10P62072 90 aa19.5■□□□□ 0.71
PGAP1-208ENST00000470179 SLC10A5Q5PT55 438 aa19.5■□□□□ 0.71
PGAP1-208ENST00000470179 RNF20Q5VTR2 975 aa19.5■□□□□ 0.71
PGAP1-208ENST00000470179 CCDC85AQ96PX6 553 aaPredicted RBP19.5■□□□□ 0.71
PGAP1-208ENST00000470179 SDF4Q9BRK5 362 aa19.5■□□□□ 0.71
PGAP1-208ENST00000470179 SH3TC1Q8TE82 1336 aa19.5■□□□□ 0.71
PGAP1-208ENST00000470179 CASZ1Q86V15 1759 aa19.5■□□□□ 0.71
PGAP1-208ENST00000470179 TMC6Q7Z403 805 aa19.5■□□□□ 0.71
PGAP1-208ENST00000470179 SLC16A10Q8TF71 515 aa19.5■□□□□ 0.71
PGAP1-208ENST00000470179 BBXQ8WY36 941 aaPredicted RBP19.5■□□□□ 0.71
PGAP1-208ENST00000470179 MYH3P11055 1940 aa19.5■□□□□ 0.71
PGAP1-208ENST00000470179 LMOD1P29536 600 aaPredicted RBP19.49■□□□□ 0.71
PGAP1-208ENST00000470179 FOXO4P98177 505 aa19.49■□□□□ 0.71
PGAP1-208ENST00000470179 IFNKQ9P0W0 207 aa19.49■□□□□ 0.71
PGAP1-208ENST00000470179 NDUFA8P51970 172 aa19.49■□□□□ 0.71
PGAP1-208ENST00000470179 RBM43Q6ZSC3 357 aaKnown RBP19.49■□□□□ 0.71
PGAP1-208ENST00000470179 GOLIM4O00461 696 aa19.48■□□□□ 0.71
PGAP1-208ENST00000470179 KIF20AO95235 890 aa19.48■□□□□ 0.71
PGAP1-208ENST00000470179 E4F1Q66K89 784 aaPredicted RBP19.48■□□□□ 0.71
PGAP1-208ENST00000470179 CCAR2Q8N163 923 aaKnown RBP19.48■□□□□ 0.71
PGAP1-208ENST00000470179 FAM89AQ96GI7 184 aa19.48■□□□□ 0.71
PGAP1-208ENST00000470179 XPO4Q9C0E2 1151 aaKnown RBP19.48■□□□□ 0.71
PGAP1-208ENST00000470179 SNRKQ9NRH2 765 aa19.48■□□□□ 0.71
PGAP1-208ENST00000470179 DENND2AQ9ULE3 1009 aa19.48■□□□□ 0.71
PGAP1-208ENST00000470179 CLIC4Q9Y696 253 aa19.48■□□□□ 0.71
PGAP1-208ENST00000470179 FANCGO15287 622 aa19.48■□□□□ 0.71
PGAP1-208ENST00000470179 RXRAP19793 462 aa19.48■□□□□ 0.71
PGAP1-208ENST00000470179 NSUN7Q8NE18 718 aaKnown RBP19.48■□□□□ 0.71
PGAP1-208ENST00000470179 ZNF609O15014 1411 aa19.47■□□□□ 0.71
PGAP1-208ENST00000470179 POLR3GO15318 223 aaPredicted RBP19.47■□□□□ 0.71
PGAP1-208ENST00000470179 SEC31AO94979 1220 aaKnown RBP19.47■□□□□ 0.71
PGAP1-208ENST00000470179 CSF1RP07333 972 aa19.47■□□□□ 0.71
PGAP1-208ENST00000470179 ARMCX5Q6P1M9 558 aa19.47■□□□□ 0.71
PGAP1-208ENST00000470179 ZCCHC17Q9NP64 241 aaKnown RBP19.47■□□□□ 0.71
PGAP1-208ENST00000470179 KINO60870 393 aaKnown RBP19.47■□□□□ 0.71
PGAP1-208ENST00000470179 NYAP1Q6ZVC0 841 aa19.47■□□□□ 0.71
PGAP1-208ENST00000470179 MARCKSP29966 332 aaPredicted RBP19.46■□□□□ 0.71
PGAP1-208ENST00000470179 TERF2Q15554 542 aa19.46■□□□□ 0.71
PGAP1-208ENST00000470179 TPTE2Q6XPS3 522 aa19.46■□□□□ 0.71
PGAP1-208ENST00000470179 AIFM3Q96NN9 605 aa19.46■□□□□ 0.71
PGAP1-208ENST00000470179 PCDHA7Q9UN72 937 aa19.46■□□□□ 0.71
PGAP1-208ENST00000470179 POLRMTO00411 1230 aaKnown RBP19.46■□□□□ 0.71
PGAP1-208ENST00000470179 IRS4O14654 1257 aaPredicted RBP19.46■□□□□ 0.71
PGAP1-208ENST00000470179 PDE8AO60658 829 aa19.46■□□□□ 0.71
PGAP1-208ENST00000470179 MED23Q9ULK4 1368 aa19.46■□□□□ 0.71
PGAP1-208ENST00000470179 UBE2Q2LH0YL09 131 aa19.46■□□□□ 0.71
PGAP1-208ENST00000470179 EPB41L2O43491 1005 aaKnown RBP19.46■□□□□ 0.71
PGAP1-208ENST00000470179 GYS2P54840 703 aa19.46■□□□□ 0.71
PGAP1-208ENST00000470179 ZNF594Q96JF6 807 aaPredicted RBP19.46■□□□□ 0.71
PGAP1-208ENST00000470179 FEZ1Q99689 392 aa19.46■□□□□ 0.71
PGAP1-208ENST00000470179 PAXBP1Q9Y5B6 917 aa19.46■□□□□ 0.71
PGAP1-208ENST00000470179 CCDC73Q6ZRK6 1079 aa19.45■□□□□ 0.7
PGAP1-208ENST00000470179 NKX2-3Q8TAU0 364 aa19.45■□□□□ 0.7
PGAP1-208ENST00000470179 RTL9Q8NET4 1388 aa19.45■□□□□ 0.7
PGAP1-208ENST00000470179 STX1AQ16623 288 aa19.45■□□□□ 0.7
PGAP1-208ENST00000470179 DDR1Q08345 913 aa19.44■□□□□ 0.7
PGAP1-208ENST00000470179 NBPF5PQ86XG9 351 aaPredicted RBP19.44■□□□□ 0.7
PGAP1-208ENST00000470179 DPF2Q92785 391 aa19.44■□□□□ 0.7
PGAP1-208ENST00000470179 BICDL1Q6ZP65 573 aa19.44■□□□□ 0.7
PGAP1-208ENST00000470179 SYNE4Q8N205 404 aa19.44■□□□□ 0.7
PGAP1-208ENST00000470179 ANKRD1Q15327 319 aa19.43■□□□□ 0.7
PGAP1-208ENST00000470179 MORC2Q9Y6X9 1032 aaPredicted RBP19.43■□□□□ 0.7
PGAP1-208ENST00000470179 GOLGB1Q14789 3259 aaKnown RBP19.43■□□□□ 0.7
PGAP1-208ENST00000470179 SPECC1Q5M775 1068 aa19.43■□□□□ 0.7
PGAP1-208ENST00000470179 HOMER1Q86YM7 354 aa19.43■□□□□ 0.7
PGAP1-208ENST00000470179 SERPINB2P05120 415 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 CTSWP56202 376 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 ERFEQ4G0M1 354 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 TNNI3KQ59H18 835 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 ERC1Q8IUD2 1116 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 KRT222Q8N1A0 295 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 TTLL11Q8NHH1 800 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 DNAI1Q9UI46 699 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 FPGT-TNNI3KV9GXZ4 949 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 SRCAPQ6ZRS2 3230 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 FDPSP14324 419 aaKnown RBP19.42■□□□□ 0.7
PGAP1-208ENST00000470179 ENGASEQ8NFI3 743 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 PPP1R13BQ96KQ4 1090 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 ABCC12Q96J65 1359 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 GTF2E1P29083 439 aaPredicted RBP19.42■□□□□ 0.7
PGAP1-208ENST00000470179 RFX5P48382 616 aaPredicted RBP19.42■□□□□ 0.7
PGAP1-208ENST00000470179 SF3B3Q15393 1217 aaKnown RBP19.42■□□□□ 0.7
PGAP1-208ENST00000470179 LMBR1LQ6UX01 489 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 ZSWIM4Q9H7M6 989 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 CFAP45Q9UL16 551 aa19.42■□□□□ 0.7
PGAP1-208ENST00000470179 PTPN12Q05209 780 aaKnown RBP19.41■□□□□ 0.7
PGAP1-208ENST00000470179 ARHGAP29Q52LW3 1261 aa19.41■□□□□ 0.7
PGAP1-208ENST00000470179 PRR5LQ6MZQ0 368 aa19.41■□□□□ 0.7
PGAP1-208ENST00000470179 ZNF397Q8NF99 534 aaPredicted RBP19.41■□□□□ 0.7
PGAP1-208ENST00000470179 CLCN6P51797 869 aa19.41■□□□□ 0.7
PGAP1-208ENST00000470179 SF3A1Q15459 793 aaKnown RBP19.41■□□□□ 0.7
PGAP1-208ENST00000470179 CNBD1Q8NA66 436 aa19.41■□□□□ 0.7
PGAP1-208ENST00000470179 TMEM232C9JQI7 657 aa19.4■□□□□ 0.7
PGAP1-208ENST00000470179 PI16Q6UXB8 463 aa19.4■□□□□ 0.7
PGAP1-208ENST00000470179 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.4■□□□□ 0.7
PGAP1-208ENST00000470179 TMEM51Q9NW97 253 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms