RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 GTF2A2P52657 109 aa10.67□□□□□ -0.7
LSM2-210ENST00000470086 CACNB3P54284 484 aa10.67□□□□□ -0.7
LSM2-210ENST00000470086 RIPK4P57078 832 aa10.67□□□□□ -0.7
LSM2-210ENST00000470086 MAMSTRQ6ZN01 415 aa10.67□□□□□ -0.7
LSM2-210ENST00000470086 EFCAB3Q8N7B9 438 aa10.67□□□□□ -0.7
LSM2-210ENST00000470086 ZKSCAN4Q969J2 545 aaPredicted RBP10.67□□□□□ -0.7
LSM2-210ENST00000470086 PAWRQ96IZ0 340 aaKnown RBP10.67□□□□□ -0.7
LSM2-210ENST00000470086 TDRD3Q9H7E2 651 aaKnown RBP10.67□□□□□ -0.7
LSM2-210ENST00000470086 ZNF70Q9UC06 446 aaPredicted RBP10.67□□□□□ -0.7
LSM2-210ENST00000470086 NR2E3Q9Y5X4 410 aa10.67□□□□□ -0.7
LSM2-210ENST00000470086 RLFQ13129 1914 aa10.66□□□□□ -0.7
LSM2-210ENST00000470086 MAPK8IP3Q9UPT6 1336 aa10.66□□□□□ -0.7
LSM2-210ENST00000470086 UNCXA6NJT0 531 aa10.66□□□□□ -0.7
LSM2-210ENST00000470086 TCP10L2B9ZVM9 353 aa10.66□□□□□ -0.7
LSM2-210ENST00000470086 TAF5LO75529 589 aa10.66□□□□□ -0.7
LSM2-210ENST00000470086 SGPL1O95470 568 aa10.66□□□□□ -0.7
LSM2-210ENST00000470086 BMP8BP34820 402 aa10.66□□□□□ -0.7
LSM2-210ENST00000470086 LRIT3Q3SXY7 679 aa10.66□□□□□ -0.7
LSM2-210ENST00000470086 GPR153Q6NV75 609 aa10.66□□□□□ -0.7
LSM2-210ENST00000470086 DAXXQ9UER7 740 aaPredicted RBP10.66□□□□□ -0.7
LSM2-210ENST00000470086 GBF1Q92538 1859 aa10.66□□□□□ -0.7
LSM2-210ENST00000470086 CLSPNQ9HAW4 1339 aa10.65□□□□□ -0.7
LSM2-210ENST00000470086 INHAP05111 366 aa10.65□□□□□ -0.7
LSM2-210ENST00000470086 BCRP11274 1271 aa10.65□□□□□ -0.7
LSM2-210ENST00000470086 COL9A1P20849 921 aa10.65□□□□□ -0.7
LSM2-210ENST00000470086 TMPOP42166 694 aaKnown RBP10.65□□□□□ -0.7
LSM2-210ENST00000470086 CHRNDQ07001 517 aa10.65□□□□□ -0.7
LSM2-210ENST00000470086 SUPT20HL1Q3ZLR7 823 aa10.65□□□□□ -0.7
LSM2-210ENST00000470086 TDHQ8IZJ6 230 aa10.65□□□□□ -0.7
LSM2-210ENST00000470086 CCDC191Q8NCU4 936 aa10.65□□□□□ -0.7
LSM2-210ENST00000470086 HELBQ8NG08 1087 aaPredicted RBP10.65□□□□□ -0.7
LSM2-210ENST00000470086 RAET1EQ8TD07 263 aa10.65□□□□□ -0.7
LSM2-210ENST00000470086 DEFB118Q96PH6 123 aa10.65□□□□□ -0.7
LSM2-210ENST00000470086 PAK6Q9NQU5 681 aaPredicted RBP10.65□□□□□ -0.7
LSM2-210ENST00000470086 CWC25Q9NXE8 425 aaPredicted RBP10.65□□□□□ -0.7
LSM2-210ENST00000470086 DBF4Q9UBU7 674 aaPredicted RBP10.65□□□□□ -0.7
LSM2-210ENST00000470086 SIPA1L1O43166 1804 aa10.65□□□□□ -0.71
LSM2-210ENST00000470086 PFASO15067 1338 aa10.64□□□□□ -0.71
LSM2-210ENST00000470086 STK25O00506 426 aa10.64□□□□□ -0.71
LSM2-210ENST00000470086 TRIM32Q13049 653 aa10.64□□□□□ -0.71
LSM2-210ENST00000470086 CWF19L2Q2TBE0 894 aaKnown RBP10.64□□□□□ -0.71
LSM2-210ENST00000470086 DUSP27Q5VZP5 1158 aa10.64□□□□□ -0.71
LSM2-210ENST00000470086 RIC3Q7Z5B4 369 aa10.64□□□□□ -0.71
LSM2-210ENST00000470086 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.64□□□□□ -0.71
LSM2-210ENST00000470086 NKX2-3Q8TAU0 364 aa10.64□□□□□ -0.71
LSM2-210ENST00000470086 CDC5LQ99459 802 aaKnown RBP10.64□□□□□ -0.71
LSM2-210ENST00000470086 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
LSM2-210ENST00000470086 LAS1LQ9Y4W2 734 aaKnown RBP10.64□□□□□ -0.71
LSM2-210ENST00000470086 CYP2C8P10632 490 aa10.63□□□□□ -0.71
LSM2-210ENST00000470086 INPP5BP32019 993 aa10.63□□□□□ -0.71
LSM2-210ENST00000470086 PRMT2P55345 433 aa10.63□□□□□ -0.71
LSM2-210ENST00000470086 MAP3K9P80192 1104 aa10.63□□□□□ -0.71
LSM2-210ENST00000470086 KIF22Q14807 665 aa10.63□□□□□ -0.71
LSM2-210ENST00000470086 CCDC146Q8IYE0 955 aa10.63□□□□□ -0.71
LSM2-210ENST00000470086 WRNIP1Q96S55 665 aa10.63□□□□□ -0.71
LSM2-210ENST00000470086 PCGF6Q9BYE7 350 aa10.63□□□□□ -0.71
LSM2-210ENST00000470086 BABAM1Q9NWV8 329 aa10.63□□□□□ -0.71
LSM2-210ENST00000470086 LEMD3Q9Y2U8 911 aa10.63□□□□□ -0.71
LSM2-210ENST00000470086 MYH2Q9UKX2 1941 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 CDK5RAP2Q96SN8 1893 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 PDHXO00330 501 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 FMNL1O95466 1100 aaPredicted RBP10.62□□□□□ -0.71
LSM2-210ENST00000470086 GNRH1P01148 92 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 CETPP11597 493 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 IL1R1P14778 569 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 ITGA6P23229 1130 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 RBM5P52756 815 aaKnown RBP eCLIP10.62□□□□□ -0.71
LSM2-210ENST00000470086 CASP7P55210 303 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 PPIL2Q13356 520 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 GPAT2Q6NUI2 795 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 METTL22Q9BUU2 404 aaPredicted RBP10.62□□□□□ -0.71
LSM2-210ENST00000470086 MBIPQ9NS73 344 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 HYPKQ9NX55 129 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 BIN2Q9UBW5 565 aaPredicted RBP10.62□□□□□ -0.71
LSM2-210ENST00000470086 STK24Q9Y6E0 443 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 CACNA1FO60840 1977 aa10.62□□□□□ -0.71
LSM2-210ENST00000470086 ADCY3O60266 1144 aa10.61□□□□□ -0.71
LSM2-210ENST00000470086 HOXB7P09629 217 aa10.61□□□□□ -0.71
LSM2-210ENST00000470086 SLURP2P0DP57 97 aa10.61□□□□□ -0.71
LSM2-210ENST00000470086 FLT3LGP49771 235 aa10.61□□□□□ -0.71
LSM2-210ENST00000470086 ARHGEF6Q15052 776 aa10.61□□□□□ -0.71
LSM2-210ENST00000470086 UBE3BQ7Z3V4 1068 aa10.61□□□□□ -0.71
LSM2-210ENST00000470086 SLAIN1Q8ND83 568 aa10.61□□□□□ -0.71
LSM2-210ENST00000470086 ZCCHC17Q9NP64 241 aaKnown RBP10.61□□□□□ -0.71
LSM2-210ENST00000470086 SCUBE2Q9NQ36 999 aa10.61□□□□□ -0.71
LSM2-210ENST00000470086 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.61□□□□□ -0.71
LSM2-210ENST00000470086 MAP3K2Q9Y2U5 619 aa10.61□□□□□ -0.71
LSM2-210ENST00000470086 CSADQ9Y600 493 aa10.61□□□□□ -0.71
LSM2-210ENST00000470086 TCF20Q9UGU0 1960 aaKnown RBP10.61□□□□□ -0.71
LSM2-210ENST00000470086 ELL2O00472 640 aaPredicted RBP10.6□□□□□ -0.71
LSM2-210ENST00000470086 MYO1BO43795 1136 aa10.6□□□□□ -0.71
LSM2-210ENST00000470086 MMP14P50281 582 aa10.6□□□□□ -0.71
LSM2-210ENST00000470086 UBXN2AP68543 259 aa10.6□□□□□ -0.71
LSM2-210ENST00000470086 SNAPC2Q13487 334 aa10.6□□□□□ -0.71
LSM2-210ENST00000470086 ANKRD23Q86SG2 305 aa10.6□□□□□ -0.71
LSM2-210ENST00000470086 ERO1BQ86YB8 467 aa10.6□□□□□ -0.71
LSM2-210ENST00000470086 DZIP1LQ8IYY4 767 aaKnown RBP10.6□□□□□ -0.71
LSM2-210ENST00000470086 HS6ST3Q8IZP7 471 aa10.6□□□□□ -0.71
LSM2-210ENST00000470086 USP38Q8NB14 1042 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms