RNA–Protein interactions for RNA: ENST00000470005.1

CHL1-210, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-210ENST00000470005 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.23□□□□□ -0.93
CHL1-210ENST00000470005 ROBO1Q9Y6N7 1651 aa9.23□□□□□ -0.93
CHL1-210ENST00000470005 SHANK3Q9BYB0 1731 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 AFDNP55196 1824 aaKnown RBP9.22□□□□□ -0.93
CHL1-210ENST00000470005 IRS4O14654 1257 aaPredicted RBP9.22□□□□□ -0.93
CHL1-210ENST00000470005 STX6O43752 255 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 ZSCAN22P10073 491 aaPredicted RBP9.22□□□□□ -0.93
CHL1-210ENST00000470005 CTSWP56202 376 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 PRR20EP86478 221 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 PRR20CP86479 221 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 PRR20DP86480 221 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 PRR20BP86481 221 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 PRR20AP86496 221 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 TTF1Q15361 905 aaPredicted RBP9.22□□□□□ -0.93
CHL1-210ENST00000470005 ZMYM1Q5SVZ6 1142 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 DESI1Q6ICB0 168 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 DDX46Q7L014 1031 aaKnown RBP9.22□□□□□ -0.93
CHL1-210ENST00000470005 ZNF512BQ96KM6 892 aaPredicted RBP9.22□□□□□ -0.93
CHL1-210ENST00000470005 NEK1Q96PY6 1258 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.22□□□□□ -0.93
CHL1-210ENST00000470005 TRMT112Q9UI30 125 aaKnown RBP9.22□□□□□ -0.93
CHL1-210ENST00000470005 KIF3AQ9Y496 699 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 NUP188Q5SRE5 1749 aa9.22□□□□□ -0.93
CHL1-210ENST00000470005 GOLIM4O00461 696 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 LETM1O95202 739 aaPredicted RBP9.21□□□□□ -0.94
CHL1-210ENST00000470005 UQCRFS1P1P0C7P4 283 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 XRCC6P12956 609 aaKnown RBP eCLIP9.21□□□□□ -0.94
CHL1-210ENST00000470005 CLK2P49760 499 aaKnown RBP9.21□□□□□ -0.94
CHL1-210ENST00000470005 TIMM10P62072 90 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 PKP1Q13835 747 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 LRRC24Q50LG9 513 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 METTL24Q5JXM2 366 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 LDHAL6AQ6ZMR3 332 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 ZNF34Q8IZ26 560 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 TMEM87AQ8NBN3 555 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 FAM89AQ96GI7 184 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 XAGE2Q96GT9 111 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 CNNM1Q9NRU3 951 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 CCDC87Q9NVE4 849 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 POLR3EQ9NVU0 708 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 ZNF652Q9Y2D9 606 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 ZBTB1Q9Y2K1 713 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 SPATA31A5Q5VU36 1347 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 MROH5Q6ZUA9 1318 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 SPATA31A7Q8IWB4 1347 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 AK9Q5TCS8 1911 aa9.21□□□□□ -0.94
CHL1-210ENST00000470005 TOGARAM1Q9Y4F4 1720 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 TNFRSF10AO00220 468 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 LILRB3O75022 631 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 ADAMTS2O95450 1211 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 F13A1P00488 732 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 ITGA6P23229 1130 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 EIF5P55010 431 aaKnown RBP9.2□□□□□ -0.94
CHL1-210ENST00000470005 FGD1P98174 961 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 FOXC1Q12948 553 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 TRIM32Q13049 653 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 ATP2B3Q16720 1220 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 PTPRNQ16849 979 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 ADCK5Q3MIX3 580 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 ZNF589Q86UQ0 364 aaPredicted RBP9.2□□□□□ -0.94
CHL1-210ENST00000470005 CCDC83Q8IWF9 413 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 TTLL11Q8NHH1 800 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 ZNF594Q96JF6 807 aaPredicted RBP9.2□□□□□ -0.94
CHL1-210ENST00000470005 UTP14AQ9BVJ6 771 aaKnown RBP9.2□□□□□ -0.94
CHL1-210ENST00000470005 PKD2L1Q9P0L9 805 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 LTBP4Q8N2S1 1624 aa9.2□□□□□ -0.94
CHL1-210ENST00000470005 NUTM2BA6NNL0 878 aaPredicted RBP9.19□□□□□ -0.94
CHL1-210ENST00000470005 NUTM2EB1AL46 878 aaPredicted RBP9.19□□□□□ -0.94
CHL1-210ENST00000470005 CFAP99D6REC4 459 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 CCNYL3P0C7X3 344 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 SYT1P21579 422 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 GPTP24298 496 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 GJB2P29033 226 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 HLFQ16534 295 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 QPCTQ16769 361 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 ME3Q16798 604 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 LARP1BQ659C4 914 aaKnown RBP9.19□□□□□ -0.94
CHL1-210ENST00000470005 PTCRAQ6ISU1 281 aaPredicted RBP9.19□□□□□ -0.94
CHL1-210ENST00000470005 CAVIN1Q6NZI2 390 aaKnown RBP9.19□□□□□ -0.94
CHL1-210ENST00000470005 DHX32Q7L7V1 743 aaKnown RBP9.19□□□□□ -0.94
CHL1-210ENST00000470005 NUTM2AQ8IVF1 878 aaPredicted RBP9.19□□□□□ -0.94
CHL1-210ENST00000470005 EDC3Q96F86 508 aaKnown RBP9.19□□□□□ -0.94
CHL1-210ENST00000470005 LLPHQ9BRT6 129 aaKnown RBP9.19□□□□□ -0.94
CHL1-210ENST00000470005 EVA1BQ9NVM1 165 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 TPCN1Q9ULQ1 816 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 TBC1D2BQ9UPU7 963 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 CCDC9Q9Y3X0 531 aaKnown RBP9.19□□□□□ -0.94
CHL1-210ENST00000470005 RIPOR2Q9Y4F9 1068 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 COL16A1Q07092 1604 aaPredicted RBP9.19□□□□□ -0.94
CHL1-210ENST00000470005 SPEF2Q9C093 1822 aa9.19□□□□□ -0.94
CHL1-210ENST00000470005 LOC102724428A0A0B4J2F2 783 aa9.18□□□□□ -0.94
CHL1-210ENST00000470005 SLC5A1P13866 664 aa9.18□□□□□ -0.94
CHL1-210ENST00000470005 SIK1P57059 783 aa9.18□□□□□ -0.94
CHL1-210ENST00000470005 FKBP4Q02790 459 aaKnown RBP eCLIP9.18□□□□□ -0.94
CHL1-210ENST00000470005 TJP1Q07157 1748 aa9.18□□□□□ -0.94
CHL1-210ENST00000470005 PUM3Q15397 648 aaKnown RBP9.18□□□□□ -0.94
CHL1-210ENST00000470005 SKIV2LQ15477 1246 aaKnown RBP9.18□□□□□ -0.94
CHL1-210ENST00000470005 IMMTQ16891 758 aaKnown RBP9.18□□□□□ -0.94
CHL1-210ENST00000470005 ZSCAN23Q3MJ62 389 aa9.18□□□□□ -0.94
CHL1-210ENST00000470005 CCDC152Q4G0S7 254 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms