RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 CEP135Q66GS9 1140 aa16.49■□□□□ 0.23
SMARCD3-205ENST00000469154 ARHGEF1Q92888 912 aaKnown RBP16.49■□□□□ 0.23
SMARCD3-205ENST00000469154 ORC3Q9UBD5 711 aaPredicted RBP16.49■□□□□ 0.23
SMARCD3-205ENST00000469154 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 ADORA1P30542 326 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 EN1Q05925 392 aaPredicted RBP16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 NCBP1Q09161 790 aaKnown RBP16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 TRIM28Q13263 835 aaKnown RBP16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 RALYLQ86SE5 291 aaKnown RBP16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 FBXO18Q8NFZ0 1043 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 SRP68Q9UHB9 627 aaKnown RBP16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 ECM29Q5VYK3 1845 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 TNS1Q9HBL0 1735 aaKnown RBP16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 AKAP11Q9UKA4 1901 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 SKILP12757 684 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 HAND2P61296 217 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 TRAPPC3LQ5T215 181 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 MYSM1Q5VVJ2 828 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 NLRP10Q86W26 655 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 PLA2G12BQ9BX93 195 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 GPHNQ9NQX3 736 aaPredicted RBP16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 KCND1Q9NSA2 647 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 IMPACTQ9P2X3 320 aa16.48■□□□□ 0.23
SMARCD3-205ENST00000469154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 A0A1B0GVL5 298 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 CPLX1O14810 134 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 SPTLC2O15270 562 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 FGAP02671 866 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 NDUFA8P51970 172 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 CCZ1BP86790 482 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 CCZ1P86791 482 aaPredicted RBP16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 KIAA1468Q9P260 1216 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 HPS5Q9UPZ3 1129 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 CLIC4Q9Y696 253 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 MYH3P11055 1940 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 UBN2Q6ZU65 1347 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 ZPR1O75312 459 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 PCCAP05165 728 aaPredicted RBP16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 RFC4P35249 363 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 DHX8Q14562 1220 aaKnown RBP16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 EZH2Q15910 746 aaKnown RBP16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 TAF7LQ5H9L4 462 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 ZNF34Q8IZ26 560 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 NARFQ9UHQ1 456 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 ZNF652Q9Y2D9 606 aa16.47■□□□□ 0.23
SMARCD3-205ENST00000469154 NUP98P52948 1817 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 ANTXR2P58335 489 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 TPM4P67936 248 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 SF3B2Q13435 895 aaKnown RBP16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 SYNE3Q6ZMZ3 975 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 NYAP1Q6ZVC0 841 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 FAM89AQ96GI7 184 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 NIP7Q9Y221 180 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 RIC1Q4ADV7 1423 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 A0A087WWV3 80 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 ZNF213O14771 459 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 ZAP70P43403 619 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 ARID5BQ14865 1188 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 PTPN14Q15678 1187 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 ATP2B3Q16720 1220 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 OTUD7BQ6GQQ9 843 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 FILIP1Q7Z7B0 1213 aa16.46■□□□□ 0.23
SMARCD3-205ENST00000469154 ANKRD36CQ5JPF3 1778 aa16.46■□□□□ 0.22
SMARCD3-205ENST00000469154 ZNF827Q17R98 1081 aa16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 CLEC4GQ6UXB4 293 aa16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 SYNE4Q8N205 404 aa16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 CGNQ9P2M7 1197 aaKnown RBP16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 KIF2AO00139 706 aaPredicted RBP16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 GPAA1O43292 621 aa16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 POLR3DP05423 398 aaPredicted RBP16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 NLRP12P59046 1061 aa16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 KIF23Q02241 960 aaPredicted RBP16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 ANO1Q5XXA6 986 aa16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 BICDL1Q6ZP65 573 aa16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 DEFB132Q7Z7B7 95 aa16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 CAMKK2Q96RR4 588 aa16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 FEZ1Q99689 392 aa16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 PUS7LQ9H0K6 701 aaKnown RBP16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 TFCP2L1Q9NZI6 479 aa16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 TRMT112Q9UI30 125 aaKnown RBP16.45■□□□□ 0.22
SMARCD3-205ENST00000469154 NEDD4P46934 1319 aa16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 CSF1RP07333 972 aa16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 SLC3A2P08195 630 aaKnown RBP16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 CBX1P83916 185 aa16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 IFIT5Q13325 482 aaKnown RBP16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 SCARF1Q14162 830 aa16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 UTP14CQ5TAP6 766 aaKnown RBP16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 ZBTB38Q8NAP3 1195 aaPredicted RBP16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 CCDC150Q8NCX0 1101 aa16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 ZMYM6O95789 1325 aa16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 ADRA2BP18089 450 aa16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 HMGB2P26583 209 aaKnown RBP16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 TRDNQ13061 729 aa16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 CCAR2Q8N163 923 aaKnown RBP16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 ERCC4Q92889 916 aaPredicted RBP16.44■□□□□ 0.22
SMARCD3-205ENST00000469154 CHD4Q14839 1912 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms