RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 DAGLAQ9Y4D2 1042 aa13.16□□□□□ -0.3
TGFBR3-205ENST00000468996 RASGRF1Q13972 1273 aa13.15□□□□□ -0.3
TGFBR3-205ENST00000468996 MVPQ14764 893 aaKnown RBP13.15□□□□□ -0.3
TGFBR3-205ENST00000468996 ZGPATQ8N5A5 531 aaKnown RBP13.15□□□□□ -0.3
TGFBR3-205ENST00000468996 OTUD5Q96G74 571 aa13.15□□□□□ -0.3
TGFBR3-205ENST00000468996 WRNIP1Q96S55 665 aa13.15□□□□□ -0.3
TGFBR3-205ENST00000468996 PTPN18Q99952 460 aa13.15□□□□□ -0.3
TGFBR3-205ENST00000468996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.15□□□□□ -0.3
TGFBR3-205ENST00000468996 MLLT1Q03111 559 aaPredicted RBP13.14□□□□□ -0.31
TGFBR3-205ENST00000468996 NFIAQ12857 509 aa13.14□□□□□ -0.31
TGFBR3-205ENST00000468996 OS9Q13438 667 aaPredicted RBP13.14□□□□□ -0.31
TGFBR3-205ENST00000468996 PKN2Q16513 984 aaKnown RBP13.14□□□□□ -0.31
TGFBR3-205ENST00000468996 DCAF15Q66K64 600 aa13.14□□□□□ -0.31
TGFBR3-205ENST00000468996 SPTY2D1Q68D10 685 aaPredicted RBP13.14□□□□□ -0.31
TGFBR3-205ENST00000468996 DZIP1Q86YF9 867 aaKnown RBP13.14□□□□□ -0.31
TGFBR3-205ENST00000468996 ITPRIPQ8IWB1 547 aa13.14□□□□□ -0.31
TGFBR3-205ENST00000468996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.14□□□□□ -0.31
TGFBR3-205ENST00000468996 FAM151AQ8WW52 585 aa13.14□□□□□ -0.31
TGFBR3-205ENST00000468996 C1orf115Q9H7X2 142 aa13.14□□□□□ -0.31
TGFBR3-205ENST00000468996 SALL1Q9NSC2 1324 aa13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 CCL15-CCL14A0A0B4J2E2 113 aa13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 GTF2A2P52657 109 aa13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 SOX10P56693 466 aa13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 CRHR2Q13324 411 aa13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 CCL15Q16663 113 aa13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 NOM1Q5C9Z4 860 aaKnown RBP13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 SLF2Q8IX21 1173 aa13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 CFHR5Q9BXR6 569 aa13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 ZNF341Q9BYN7 854 aa13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 HPS5Q9UPZ3 1129 aa13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 ECM29Q5VYK3 1845 aa13.13□□□□□ -0.31
TGFBR3-205ENST00000468996 TESPA1A2RU30 521 aaPredicted RBP13.12□□□□□ -0.31
TGFBR3-205ENST00000468996 SURF6O75683 361 aaKnown RBP13.12□□□□□ -0.31
TGFBR3-205ENST00000468996 RGS19P49795 217 aa13.12□□□□□ -0.31
TGFBR3-205ENST00000468996 ATP8B2P98198 1209 aa13.12□□□□□ -0.31
TGFBR3-205ENST00000468996 TBC1D9Q6ZT07 1266 aa13.12□□□□□ -0.31
TGFBR3-205ENST00000468996 ERICH6Q7L0X2 663 aa13.12□□□□□ -0.31
TGFBR3-205ENST00000468996 ERO1BQ86YB8 467 aa13.12□□□□□ -0.31
TGFBR3-205ENST00000468996 ZFPM1Q8IX07 1006 aa13.12□□□□□ -0.31
TGFBR3-205ENST00000468996 BRI3BPQ8WY22 251 aa13.12□□□□□ -0.31
TGFBR3-205ENST00000468996 FAM198AQ9UFP1 575 aa13.12□□□□□ -0.31
TGFBR3-205ENST00000468996 SPDYE5A6NIY4 337 aa13.11□□□□□ -0.31
TGFBR3-205ENST00000468996 ZBTB7BO15156 539 aaPredicted RBP13.11□□□□□ -0.31
TGFBR3-205ENST00000468996 INPP5BP32019 993 aa13.11□□□□□ -0.31
TGFBR3-205ENST00000468996 MECOMQ03112 1051 aa13.11□□□□□ -0.31
TGFBR3-205ENST00000468996 PI16Q6UXB8 463 aa13.11□□□□□ -0.31
TGFBR3-205ENST00000468996 ZSCAN29Q8IWY8 852 aaPredicted RBP13.11□□□□□ -0.31
TGFBR3-205ENST00000468996 SPATA5Q8NB90 893 aa13.11□□□□□ -0.31
TGFBR3-205ENST00000468996 RAI14Q9P0K7 980 aa13.11□□□□□ -0.31
TGFBR3-205ENST00000468996 HMG20BQ9P0W2 317 aa13.11□□□□□ -0.31
TGFBR3-205ENST00000468996 TRIM17Q9Y577 477 aa13.11□□□□□ -0.31
TGFBR3-205ENST00000468996 SNCAIPQ9Y6H5 919 aa13.11□□□□□ -0.31
TGFBR3-205ENST00000468996 IRF6O14896 467 aa13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 CETPP11597 493 aa13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 RLBP1P12271 317 aa13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 BTDP43251 543 aa13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 RGS3P49796 1198 aa13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 SP3Q02447 781 aa13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 PICALMQ13492 652 aa13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 TAF1CQ15572 869 aaPredicted RBP13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 FBXO46Q6PJ61 603 aaPredicted RBP13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 PANK1Q8TE04 598 aa13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 ZFYVE28Q9HCC9 887 aa13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 SNRKQ9NRH2 765 aa13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 LRP2BPQ9P2M1 347 aa13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 ZBED9Q6R2W3 1325 aa13.1□□□□□ -0.31
TGFBR3-205ENST00000468996 WDHD1O75717 1129 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-205ENST00000468996 LDHCP07864 332 aa13.09□□□□□ -0.31
TGFBR3-205ENST00000468996 SNAPC2Q13487 334 aa13.09□□□□□ -0.31
TGFBR3-205ENST00000468996 POLA2Q14181 598 aa13.09□□□□□ -0.31
TGFBR3-205ENST00000468996 CCDC158Q5M9N0 1113 aa13.09□□□□□ -0.31
TGFBR3-205ENST00000468996 TTC39AQ5SRH9 613 aa13.09□□□□□ -0.31
TGFBR3-205ENST00000468996 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
TGFBR3-205ENST00000468996 CD99L2Q8TCZ2 262 aa13.09□□□□□ -0.31
TGFBR3-205ENST00000468996 SSH3Q8TE77 659 aa13.09□□□□□ -0.31
TGFBR3-205ENST00000468996 FAM163AQ96GL9 167 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-205ENST00000468996 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
TGFBR3-205ENST00000468996 PDS5AQ29RF7 1337 aaKnown RBP13.09□□□□□ -0.31
TGFBR3-205ENST00000468996 ARAP2Q8WZ64 1704 aa13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 ENTPD3O75355 529 aa13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 UQCRFS1P1P0C7P4 283 aa13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 GSTO1P78417 241 aa13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 PPATQ06203 517 aa13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 PPIL2Q13356 520 aa13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 TNNI3KQ59H18 835 aa13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 OTOP1Q7RTM1 612 aa13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 IDI2Q9BXS1 227 aa13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 ZNF112Q9UJU3 913 aa13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 FPGT-TNNI3KV9GXZ4 949 aa13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 GAKO14976 1311 aa13.08□□□□□ -0.32
TGFBR3-205ENST00000468996 GPR75-ASB3A0A0A6YYF3 556 aa13.07□□□□□ -0.32
TGFBR3-205ENST00000468996 BTBD19C9JJ37 291 aa13.07□□□□□ -0.32
TGFBR3-205ENST00000468996 ZBTB22O15209 634 aa13.07□□□□□ -0.32
TGFBR3-205ENST00000468996 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
TGFBR3-205ENST00000468996 ARID4AP29374 1257 aaPredicted RBP13.07□□□□□ -0.32
TGFBR3-205ENST00000468996 MCAMP43121 646 aa13.07□□□□□ -0.32
TGFBR3-205ENST00000468996 DBNDD2Q9BQY9 259 aa13.07□□□□□ -0.32
TGFBR3-205ENST00000468996 EFCC1Q9HA90 598 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms