RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 FKBP1BP68106 108 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 MIGA2Q7L4E1 593 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 CHD1LQ86WJ1 897 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 STK11IPQ8N1F8 1099 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 C7orf43Q8WVR3 580 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 ADCY9O60503 1353 aa7.08□□□□□ -1.28
SHQ1-205ENST00000468371 CDC45O75419 566 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 ZSCAN30Q86W11 494 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 ZNF341Q9BYN7 854 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.07□□□□□ -1.28
SHQ1-205ENST00000468371 AS3MTQ9HBK9 375 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 MED23Q9ULK4 1368 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 CACNB3P54284 484 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 ATP8B2P98198 1209 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 AAMPQ13685 434 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 CCDC102BQ68D86 513 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 REM2Q8IYK8 340 aaPredicted RBP7.07□□□□□ -1.28
SHQ1-205ENST00000468371 RTFDC1Q9BY42 306 aaPredicted RBP7.07□□□□□ -1.28
SHQ1-205ENST00000468371 BOLA2Q9H3K6 86 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 ELP3Q9H9T3 547 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 KCNQ5Q9NR82 932 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 DIAPH3Q9NSV4 1193 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 IVNS1ABPQ9Y6Y0 642 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 NUP188Q5SRE5 1749 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 GOLIM4O00461 696 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 MAP2K2P36507 400 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 VEGFBP49765 207 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 DGKZQ13574 1117 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 EPHA10Q5JZY3 1008 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 CERS3Q8IU89 383 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 SPATA5Q8NB90 893 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 ZFYVE28Q9HCC9 887 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 ANO2Q9NQ90 1003 aa7.07□□□□□ -1.28
SHQ1-205ENST00000468371 LBX1P52954 281 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 MAP3K9P80192 1104 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 KIF23Q02241 960 aaPredicted RBP7.06□□□□□ -1.28
SHQ1-205ENST00000468371 FAM84BQ96KN1 310 aaPredicted RBP7.06□□□□□ -1.28
SHQ1-205ENST00000468371 C5P01031 1676 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 MANSC4A6NHS7 340 aaPredicted RBP7.06□□□□□ -1.28
SHQ1-205ENST00000468371 MINDY4BA8MYZ0 360 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 CIAO1O76071 339 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 NEK4P51957 841 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 INHBEP58166 350 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 FOXO4P98177 505 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 ZRSR1Q15695 479 aaKnown RBP7.06□□□□□ -1.28
SHQ1-205ENST00000468371 INTS3Q68E01 1043 aaKnown RBP7.06□□□□□ -1.28
SHQ1-205ENST00000468371 WNT10BO00744 389 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 BTDP43251 543 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 PHKA1P46020 1223 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 SLC9C2Q5TAH2 1124 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 ZNF444Q8N0Y2 327 aaPredicted RBP7.06□□□□□ -1.28
SHQ1-205ENST00000468371 ZNF70Q9UC06 446 aaPredicted RBP7.06□□□□□ -1.28
SHQ1-205ENST00000468371 SUGT1Q9Y2Z0 365 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 PPP2R3BQ9Y5P8 575 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 SBF2Q86WG5 1849 aa7.06□□□□□ -1.28
SHQ1-205ENST00000468371 SYCE3A1L190 88 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 GLRX3O76003 335 aaKnown RBP7.05□□□□□ -1.28
SHQ1-205ENST00000468371 RAB3GAP1Q15042 981 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 DIXDC1Q155Q3 683 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 CSPP1Q1MSJ5 1256 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 PKD1L3Q7Z443 1732 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 NBPF11Q86T75 865 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 MIGA1Q8NAN2 632 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 SERPINA10Q9UK55 444 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 ITGB4P16144 1822 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 REC8O95072 547 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 TRDNQ13061 729 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 DACT2Q5SW24 774 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 COPRSQ9NQ92 184 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 AATFQ9NY61 560 aaKnown RBP eCLIP7.05□□□□□ -1.28
SHQ1-205ENST00000468371 LRP5O75197 1615 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 CCL15-CCL14A0A0B4J2E2 113 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 MAGEB6P1A0A0J9YX57 407 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 CCL15Q16663 113 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 TBC1D9Q6ZT07 1266 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 MAGEB6Q8N7X4 407 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 ZNF592Q92610 1267 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 MCM9Q9NXL9 1143 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 RBM27Q9P2N5 1060 aaKnown RBP7.05□□□□□ -1.28
SHQ1-205ENST00000468371 SAP30BPQ9UHR5 308 aaKnown RBP7.05□□□□□ -1.28
SHQ1-205ENST00000468371 C4AP0C0L4 1744 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 USP54Q70EL1 1684 aa7.05□□□□□ -1.28
SHQ1-205ENST00000468371 YDJCA8MPS7 323 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 SNAPC2Q13487 334 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 PLS1Q14651 629 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 RRP12Q5JTH9 1297 aaKnown RBP7.04□□□□□ -1.28
SHQ1-205ENST00000468371 RHPN1Q8TCX5 695 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 PRMT6Q96LA8 375 aaPredicted RBP7.04□□□□□ -1.28
SHQ1-205ENST00000468371 PNMA3Q9UL41 463 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 AOC2O75106 756 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 CETPP11597 493 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 OSBPP22059 807 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 TXNRD3Q86VQ6 643 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 MAPKAPK5Q8IW41 473 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 RAET1EQ8TD07 263 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 TGFBRAP1Q8WUH2 860 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 SH2D4AQ9H788 454 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 ZHX2Q9Y6X8 837 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 SPDYE2BA6NHP3 402 aa7.04□□□□□ -1.28
SHQ1-205ENST00000468371 SPDYE6P0CI01 402 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms