RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PDE4DIPQ5VU43 2346 aa30.43■■■□□ 2.46
PTCH1-210ENST00000468211 CCDC102BQ68D86 513 aa30.43■■■□□ 2.46
PTCH1-210ENST00000468211 WRNIP1Q96S55 665 aa30.43■■■□□ 2.46
PTCH1-210ENST00000468211 TRIM17Q9Y577 477 aa30.43■■■□□ 2.46
PTCH1-210ENST00000468211 SALL1Q9NSC2 1324 aa30.43■■■□□ 2.46
PTCH1-210ENST00000468211 CCL15-CCL14A0A0B4J2E2 113 aa30.42■■■□□ 2.46
PTCH1-210ENST00000468211 SPDYE5A6NIY4 337 aa30.42■■■□□ 2.46
PTCH1-210ENST00000468211 LDHBP07195 334 aaKnown RBP30.42■■■□□ 2.46
PTCH1-210ENST00000468211 NFIAQ12857 509 aa30.42■■■□□ 2.46
PTCH1-210ENST00000468211 MTX1Q13505 466 aa30.42■■■□□ 2.46
PTCH1-210ENST00000468211 CCL15Q16663 113 aa30.42■■■□□ 2.46
PTCH1-210ENST00000468211 OTOP1Q7RTM1 612 aa30.42■■■□□ 2.46
PTCH1-210ENST00000468211 CD99L2Q8TCZ2 262 aa30.42■■■□□ 2.46
PTCH1-210ENST00000468211 DENND2AQ9ULE3 1009 aa30.42■■■□□ 2.46
PTCH1-210ENST00000468211 SEMA3EO15041 775 aa30.41■■■□□ 2.46
PTCH1-210ENST00000468211 TCP10Q12799 353 aa30.41■■■□□ 2.46
PTCH1-210ENST00000468211 MIGA2Q7L4E1 593 aa30.41■■■□□ 2.46
PTCH1-210ENST00000468211 FAM151AQ8WW52 585 aa30.41■■■□□ 2.46
PTCH1-210ENST00000468211 GTF2A2P52657 109 aa30.4■■■□□ 2.46
PTCH1-210ENST00000468211 TFCP2Q12800 502 aa30.4■■■□□ 2.46
PTCH1-210ENST00000468211 FAM43AQ8N2R8 423 aa30.4■■■□□ 2.46
PTCH1-210ENST00000468211 FRAT1Q92837 279 aaPredicted RBP30.4■■■□□ 2.46
PTCH1-210ENST00000468211 RASGRF1Q13972 1273 aa30.39■■■□□ 2.46
PTCH1-210ENST00000468211 ATF7IPQ6VMQ6 1270 aa30.39■■■□□ 2.46
PTCH1-210ENST00000468211 CLUAP1Q96AJ1 413 aa30.39■■■□□ 2.46
PTCH1-210ENST00000468211 FAM198AQ9UFP1 575 aa30.39■■■□□ 2.46
PTCH1-210ENST00000468211 IPO8O15397 1037 aaKnown RBP30.38■■■□□ 2.45
PTCH1-210ENST00000468211 INPP5BP32019 993 aa30.38■■■□□ 2.45
PTCH1-210ENST00000468211 ERO1BQ86YB8 467 aa30.38■■■□□ 2.45
PTCH1-210ENST00000468211 A0A1B0GUL7 405 aa30.37■■■□□ 2.45
PTCH1-210ENST00000468211 ZBTB22O15209 634 aa30.37■■■□□ 2.45
PTCH1-210ENST00000468211 DCAF15Q66K64 600 aa30.37■■■□□ 2.45
PTCH1-210ENST00000468211 ZFPM1Q8IX07 1006 aa30.37■■■□□ 2.45
PTCH1-210ENST00000468211 HOOK2Q96ED9 719 aa30.37■■■□□ 2.45
PTCH1-210ENST00000468211 XAGE2Q96GT9 111 aa30.37■■■□□ 2.45
PTCH1-210ENST00000468211 ERO1AQ96HE7 468 aa30.37■■■□□ 2.45
PTCH1-210ENST00000468211 USP40Q9NVE5 1235 aa30.37■■■□□ 2.45
PTCH1-210ENST00000468211 IRF6O14896 467 aa30.36■■■□□ 2.45
PTCH1-210ENST00000468211 SP3Q02447 781 aa30.36■■■□□ 2.45
PTCH1-210ENST00000468211 TAF1CQ15572 869 aaPredicted RBP30.36■■■□□ 2.45
PTCH1-210ENST00000468211 ZNF341Q9BYN7 854 aa30.36■■■□□ 2.45
PTCH1-210ENST00000468211 ZSWIM8A7E2V4 1837 aa30.36■■■□□ 2.45
PTCH1-210ENST00000468211 DOCK2Q92608 1830 aa30.36■■■□□ 2.45
PTCH1-210ENST00000468211 PNMA6EA0A0J9YXQ4 647 aa30.35■■■□□ 2.45
PTCH1-210ENST00000468211 CENPFP49454 3210 aa30.35■■■□□ 2.45
PTCH1-210ENST00000468211 ZNF112Q9UJU3 913 aa30.34■■■□□ 2.45
PTCH1-210ENST00000468211 GAKO14976 1311 aa30.33■■■□□ 2.45
PTCH1-210ENST00000468211 GNAI2P04899 355 aa30.33■■■□□ 2.45
PTCH1-210ENST00000468211 PPIL2Q13356 520 aa30.33■■■□□ 2.45
PTCH1-210ENST00000468211 MIER1Q8N108 512 aa30.33■■■□□ 2.45
PTCH1-210ENST00000468211 ZFYVE28Q9HCC9 887 aa30.33■■■□□ 2.45
PTCH1-210ENST00000468211 ABCF2Q9UG63 623 aa30.33■■■□□ 2.45
PTCH1-210ENST00000468211 AKAP2Q9Y2D5 859 aa30.33■■■□□ 2.45
PTCH1-210ENST00000468211 PTPN22Q9Y2R2 807 aa30.33■■■□□ 2.45
PTCH1-210ENST00000468211 PDS5AQ29RF7 1337 aaKnown RBP30.32■■■□□ 2.44
PTCH1-210ENST00000468211 BTBD19C9JJ37 291 aa30.32■■■□□ 2.44
PTCH1-210ENST00000468211 CETPP11597 493 aa30.32■■■□□ 2.44
PTCH1-210ENST00000468211 TMEM57Q8N5G2 664 aa30.32■■■□□ 2.44
PTCH1-210ENST00000468211 EFCC1Q9HA90 598 aa30.32■■■□□ 2.44
PTCH1-210ENST00000468211 SNAPC2Q13487 334 aa30.31■■■□□ 2.44
PTCH1-210ENST00000468211 ZGPATQ8N5A5 531 aaKnown RBP30.31■■■□□ 2.44
PTCH1-210ENST00000468211 NEUROD6Q96NK8 337 aa30.31■■■□□ 2.44
PTCH1-210ENST00000468211 RFX7Q2KHR2 1363 aa30.3■■■□□ 2.44
PTCH1-210ENST00000468211 ATRNL1Q5VV63 1379 aa30.3■■■□□ 2.44
PTCH1-210ENST00000468211 RGS3P49796 1198 aa30.3■■■□□ 2.44
PTCH1-210ENST00000468211 ZNF384Q8TF68 577 aa30.3■■■□□ 2.44
PTCH1-210ENST00000468211 PPATQ06203 517 aa30.29■■■□□ 2.44
PTCH1-210ENST00000468211 MVPQ14764 893 aaKnown RBP30.29■■■□□ 2.44
PTCH1-210ENST00000468211 PI16Q6UXB8 463 aa30.29■■■□□ 2.44
PTCH1-210ENST00000468211 DZIP1Q86YF9 867 aaKnown RBP30.29■■■□□ 2.44
PTCH1-210ENST00000468211 IDI2Q9BXS1 227 aa30.29■■■□□ 2.44
PTCH1-210ENST00000468211 HNRNPUQ00839 825 aaKnown RBP eCLIP30.28■■■□□ 2.44
PTCH1-210ENST00000468211 SH3BP5LQ7L8J4 393 aa30.28■■■□□ 2.44
PTCH1-210ENST00000468211 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.28■■■□□ 2.44
PTCH1-210ENST00000468211 HMG20BQ9P0W2 317 aa30.28■■■□□ 2.44
PTCH1-210ENST00000468211 SLURP2P0DP57 97 aa30.27■■■□□ 2.44
PTCH1-210ENST00000468211 ZKSCAN2Q63HK3 967 aa30.27■■■□□ 2.44
PTCH1-210ENST00000468211 FAM163AQ96GL9 167 aaPredicted RBP30.27■■■□□ 2.44
PTCH1-210ENST00000468211 DDX4Q9NQI0 724 aaKnown RBP30.27■■■□□ 2.44
PTCH1-210ENST00000468211 RBBP6Q7Z6E9 1792 aaKnown RBP30.27■■■□□ 2.44
PTCH1-210ENST00000468211 WDHD1O75717 1129 aaPredicted RBP30.26■■■□□ 2.43
PTCH1-210ENST00000468211 MECOMQ03112 1051 aa30.26■■■□□ 2.43
PTCH1-210ENST00000468211 KIAA0100Q14667 2235 aaKnown RBP30.26■■■□□ 2.43
PTCH1-210ENST00000468211 TLR2O60603 784 aa30.25■■■□□ 2.43
PTCH1-210ENST00000468211 ENTPD3O75355 529 aa30.25■■■□□ 2.43
PTCH1-210ENST00000468211 BTDP43251 543 aa30.25■■■□□ 2.43
PTCH1-210ENST00000468211 NOL9Q5SY16 702 aaKnown RBP30.25■■■□□ 2.43
PTCH1-210ENST00000468211 SPTY2D1Q68D10 685 aaPredicted RBP30.25■■■□□ 2.43
PTCH1-210ENST00000468211 TBC1D9Q6ZT07 1266 aa30.25■■■□□ 2.43
PTCH1-210ENST00000468211 ZCCHC17Q9NP64 241 aaKnown RBP30.25■■■□□ 2.43
PTCH1-210ENST00000468211 KCNH4Q9UQ05 1017 aa30.25■■■□□ 2.43
PTCH1-210ENST00000468211 MROH7-TTC4A0A0A0MT08 1334 aa30.24■■■□□ 2.43
PTCH1-210ENST00000468211 POTEFA5A3E0 1075 aa30.24■■■□□ 2.43
PTCH1-210ENST00000468211 PHF20L1A8MW92 1017 aa30.24■■■□□ 2.43
PTCH1-210ENST00000468211 G3BP1Q13283 466 aaKnown RBP eCLIP30.24■■■□□ 2.43
PTCH1-210ENST00000468211 MOGSQ13724 837 aa30.24■■■□□ 2.43
PTCH1-210ENST00000468211 SPATA5Q8NB90 893 aa30.24■■■□□ 2.43
PTCH1-210ENST00000468211 ARHGAP39Q9C0H5 1083 aa30.24■■■□□ 2.43
PTCH1-210ENST00000468211 DDTLA6NHG4 134 aaPredicted RBP30.23■■■□□ 2.43
PTCH1-210ENST00000468211 ERICH6Q7L0X2 663 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms