RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 OTUD7BQ6GQQ9 843 aa16.62■□□□□ 0.25
C9orf3-212ENST00000468164 MIGA2Q7L4E1 593 aa16.62■□□□□ 0.25
C9orf3-212ENST00000468164 FAM83AQ86UY5 434 aa16.62■□□□□ 0.25
C9orf3-212ENST00000468164 DZIP1Q86YF9 867 aaKnown RBP16.62■□□□□ 0.25
C9orf3-212ENST00000468164 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.62■□□□□ 0.25
C9orf3-212ENST00000468164 XAGE2Q96GT9 111 aa16.62■□□□□ 0.25
C9orf3-212ENST00000468164 WRNIP1Q96S55 665 aa16.62■□□□□ 0.25
C9orf3-212ENST00000468164 USP40Q9NVE5 1235 aa16.62■□□□□ 0.25
C9orf3-212ENST00000468164 AKAP2Q9Y2D5 859 aa16.62■□□□□ 0.25
C9orf3-212ENST00000468164 PNMA6EA0A0J9YXQ4 647 aa16.61■□□□□ 0.25
C9orf3-212ENST00000468164 SEMA3EO15041 775 aa16.61■□□□□ 0.25
C9orf3-212ENST00000468164 G3BP1Q13283 466 aaKnown RBP eCLIP16.61■□□□□ 0.25
C9orf3-212ENST00000468164 MTX1Q13505 466 aa16.61■□□□□ 0.25
C9orf3-212ENST00000468164 RASGRF1Q13972 1273 aa16.61■□□□□ 0.25
C9orf3-212ENST00000468164 CDC42EP5Q6NZY7 148 aa16.61■□□□□ 0.25
C9orf3-212ENST00000468164 ZKSCAN4Q969J2 545 aaPredicted RBP16.61■□□□□ 0.25
C9orf3-212ENST00000468164 HOOK2Q96ED9 719 aa16.61■□□□□ 0.25
C9orf3-212ENST00000468164 C1orf115Q9H7X2 142 aa16.61■□□□□ 0.25
C9orf3-212ENST00000468164 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.61■□□□□ 0.25
C9orf3-212ENST00000468164 NFIAQ12857 509 aa16.6■□□□□ 0.25
C9orf3-212ENST00000468164 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
C9orf3-212ENST00000468164 MVPQ14764 893 aaKnown RBP16.6■□□□□ 0.25
C9orf3-212ENST00000468164 FKBP1CQ5VVH2 108 aa16.6■□□□□ 0.25
C9orf3-212ENST00000468164 DCAF15Q66K64 600 aa16.6■□□□□ 0.25
C9orf3-212ENST00000468164 ITPRIPQ8IWB1 547 aa16.6■□□□□ 0.25
C9orf3-212ENST00000468164 ZGPATQ8N5A5 531 aaKnown RBP16.6■□□□□ 0.25
C9orf3-212ENST00000468164 ZSWIM8A7E2V4 1837 aa16.59■□□□□ 0.25
C9orf3-212ENST00000468164 CDK5RAP2Q96SN8 1893 aa16.59■□□□□ 0.25
C9orf3-212ENST00000468164 CCL15-CCL14A0A0B4J2E2 113 aa16.59■□□□□ 0.25
C9orf3-212ENST00000468164 CRHR2Q13324 411 aa16.59■□□□□ 0.25
C9orf3-212ENST00000468164 CCL15Q16663 113 aa16.59■□□□□ 0.25
C9orf3-212ENST00000468164 FAM151AQ8WW52 585 aa16.59■□□□□ 0.25
C9orf3-212ENST00000468164 PTPN18Q99952 460 aa16.59■□□□□ 0.25
C9orf3-212ENST00000468164 HPS5Q9UPZ3 1129 aa16.59■□□□□ 0.25
C9orf3-212ENST00000468164 SALL1Q9NSC2 1324 aa16.59■□□□□ 0.25
C9orf3-212ENST00000468164 ATAD5Q96QE3 1844 aa16.59■□□□□ 0.25
C9orf3-212ENST00000468164 PKN2Q16513 984 aaKnown RBP16.58■□□□□ 0.24
C9orf3-212ENST00000468164 CFHR5Q9BXR6 569 aa16.58■□□□□ 0.24
C9orf3-212ENST00000468164 ZNF341Q9BYN7 854 aa16.58■□□□□ 0.24
C9orf3-212ENST00000468164 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
C9orf3-212ENST00000468164 RPAP1Q9BWH6 1393 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-212ENST00000468164 DOCK1Q14185 1865 aa16.57■□□□□ 0.24
C9orf3-212ENST00000468164 MAST2Q6P0Q8 1798 aa16.57■□□□□ 0.24
C9orf3-212ENST00000468164 GTF2A2P52657 109 aa16.57■□□□□ 0.24
C9orf3-212ENST00000468164 NOM1Q5C9Z4 860 aaKnown RBP16.57■□□□□ 0.24
C9orf3-212ENST00000468164 SPTY2D1Q68D10 685 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-212ENST00000468164 PI16Q6UXB8 463 aa16.57■□□□□ 0.24
C9orf3-212ENST00000468164 ERICH6Q7L0X2 663 aa16.57■□□□□ 0.24
C9orf3-212ENST00000468164 ZSCAN29Q8IWY8 852 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-212ENST00000468164 BRI3BPQ8WY22 251 aa16.57■□□□□ 0.24
C9orf3-212ENST00000468164 FAM198AQ9UFP1 575 aa16.57■□□□□ 0.24
C9orf3-212ENST00000468164 TRIM17Q9Y577 477 aa16.57■□□□□ 0.24
C9orf3-212ENST00000468164 CENPFP49454 3210 aa16.57■□□□□ 0.24
C9orf3-212ENST00000468164 ZBED9Q6R2W3 1325 aa16.56■□□□□ 0.24
C9orf3-212ENST00000468164 SPDYE5A6NIY4 337 aa16.56■□□□□ 0.24
C9orf3-212ENST00000468164 INPP5BP32019 993 aa16.56■□□□□ 0.24
C9orf3-212ENST00000468164 RGS3P49796 1198 aa16.56■□□□□ 0.24
C9orf3-212ENST00000468164 PICALMQ13492 652 aa16.56■□□□□ 0.24
C9orf3-212ENST00000468164 TAF1CQ15572 869 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-212ENST00000468164 FBXO46Q6PJ61 603 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-212ENST00000468164 TBC1D9Q6ZT07 1266 aa16.56■□□□□ 0.24
C9orf3-212ENST00000468164 ERO1BQ86YB8 467 aa16.56■□□□□ 0.24
C9orf3-212ENST00000468164 ZFPM1Q8IX07 1006 aa16.56■□□□□ 0.24
C9orf3-212ENST00000468164 SLF2Q8IX21 1173 aa16.56■□□□□ 0.24
C9orf3-212ENST00000468164 CD99L2Q8TCZ2 262 aa16.56■□□□□ 0.24
C9orf3-212ENST00000468164 MS4A4AQ96JQ5 239 aa16.56■□□□□ 0.24
C9orf3-212ENST00000468164 PTPRFP10586 1907 aa16.56■□□□□ 0.24
C9orf3-212ENST00000468164 TESPA1A2RU30 521 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-212ENST00000468164 SURF6O75683 361 aaKnown RBP16.55■□□□□ 0.24
C9orf3-212ENST00000468164 RLBP1P12271 317 aa16.55■□□□□ 0.24
C9orf3-212ENST00000468164 BTDP43251 543 aa16.55■□□□□ 0.24
C9orf3-212ENST00000468164 RGS19P49795 217 aa16.55■□□□□ 0.24
C9orf3-212ENST00000468164 MECOMQ03112 1051 aa16.55■□□□□ 0.24
C9orf3-212ENST00000468164 SPATA5Q8NB90 893 aa16.55■□□□□ 0.24
C9orf3-212ENST00000468164 RAI14Q9P0K7 980 aa16.55■□□□□ 0.24
C9orf3-212ENST00000468164 HMG20BQ9P0W2 317 aa16.55■□□□□ 0.24
C9orf3-212ENST00000468164 IRF6O14896 467 aa16.54■□□□□ 0.24
C9orf3-212ENST00000468164 FAM43AQ8N2R8 423 aa16.54■□□□□ 0.24
C9orf3-212ENST00000468164 ERO1AQ96HE7 468 aa16.54■□□□□ 0.24
C9orf3-212ENST00000468164 FOCADQ5VW36 1801 aa16.54■□□□□ 0.24
C9orf3-212ENST00000468164 PHIPQ8WWQ0 1821 aa16.54■□□□□ 0.24
C9orf3-212ENST00000468164 HTTP42858 3142 aa16.54■□□□□ 0.24
C9orf3-212ENST00000468164 PDE4DIPQ5VU43 2346 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 MROH7-TTC4A0A0A0MT08 1334 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 GAKO14976 1311 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 PDS5AQ29RF7 1337 aaKnown RBP16.53■□□□□ 0.24
C9orf3-212ENST00000468164 MGAMO43451 1857 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 WDHD1O75717 1129 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-212ENST00000468164 ECM2O94769 699 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-212ENST00000468164 CETPP11597 493 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 ATP8B2P98198 1209 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 SP3Q02447 781 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 SNAPC2Q13487 334 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 TTC39AQ5SRH9 613 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 OTOP1Q7RTM1 612 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-212ENST00000468164 PANK1Q8TE04 598 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 ZFYVE28Q9HCC9 887 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
C9orf3-212ENST00000468164 MCAMP43121 646 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms