RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 ANKRD65E5RJM6 399 aa10.54□□□□□ -0.72
LCA5-203ENST00000467898 IFT88Q13099 833 aa10.54□□□□□ -0.72
LCA5-203ENST00000467898 RBM26Q5T8P6 1007 aaKnown RBP10.54□□□□□ -0.72
LCA5-203ENST00000467898 TSPYL6Q8N831 410 aa10.54□□□□□ -0.72
LCA5-203ENST00000467898 TRIM5Q9C035 493 aa10.54□□□□□ -0.72
LCA5-203ENST00000467898 KLC4Q9NSK0 619 aa10.54□□□□□ -0.72
LCA5-203ENST00000467898 TCHHQ07283 1943 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 SPDYE3A6NKU9 549 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 GADD45BO75293 160 aaPredicted RBP10.53□□□□□ -0.72
LCA5-203ENST00000467898 E2F6O75461 281 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 FERP16591 822 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 USP5P45974 858 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 CUL4AQ13619 759 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 CCDC38Q502W7 563 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 LRRC23Q53EV4 343 aaPredicted RBP10.53□□□□□ -0.72
LCA5-203ENST00000467898 ARMC3Q5W041 872 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 CCDC114Q96M63 670 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 CAPN7Q9Y6W3 813 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 GOLGA6L19H0YKK7 550 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 RANBP1P43487 201 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 EVCP57679 992 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 CCZ1BP86790 482 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 CCZ1P86791 482 aaPredicted RBP10.53□□□□□ -0.72
LCA5-203ENST00000467898 CAPRIN2Q6IMN6 1127 aaKnown RBP10.53□□□□□ -0.72
LCA5-203ENST00000467898 MTHFD1LQ6UB35 978 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 NUP133Q8WUM0 1156 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 EPAS1Q99814 870 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 CORO1CQ9ULV4 474 aaPredicted RBP10.53□□□□□ -0.72
LCA5-203ENST00000467898 KIF24Q5T7B8 1368 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 CRB1P82279 1406 aa10.53□□□□□ -0.72
LCA5-203ENST00000467898 TRPM3Q9HCF6 1732 aaPredicted RBP10.53□□□□□ -0.72
LCA5-203ENST00000467898 A6NNZ2 444 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 TUBBP07437 444 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 SESN3P58005 492 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 PSMC1P62191 440 aaKnown RBP10.52□□□□□ -0.72
LCA5-203ENST00000467898 ZBED6P86452 979 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 DCTN1Q14203 1278 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 KCNB1Q14721 858 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 TUBB8Q3ZCM7 444 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 SFMBT2Q5VUG0 894 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 B4GALNT4Q76KP1 1039 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 CCDC80Q76M96 950 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 MRPL50Q8N5N7 158 aaKnown RBP10.52□□□□□ -0.72
LCA5-203ENST00000467898 BICC1Q9H694 974 aaKnown RBP10.52□□□□□ -0.72
LCA5-203ENST00000467898 NRBP1Q9UHY1 535 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 FAN1Q9Y2M0 1017 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 IGSF1Q8N6C5 1336 aa10.52□□□□□ -0.72
LCA5-203ENST00000467898 PRPF4BQ13523 1007 aaKnown RBP10.52□□□□□ -0.73
LCA5-203ENST00000467898 RSRC2Q7L4I2 434 aaKnown RBP10.52□□□□□ -0.73
LCA5-203ENST00000467898 IQCF2Q8IXL9 164 aa10.52□□□□□ -0.73
LCA5-203ENST00000467898 PDE11AQ9HCR9 933 aa10.52□□□□□ -0.73
LCA5-203ENST00000467898 PCDHGC5Q9Y5F6 944 aa10.52□□□□□ -0.73
LCA5-203ENST00000467898 GBP2P32456 591 aaPredicted RBP10.51□□□□□ -0.73
LCA5-203ENST00000467898 TRPC1P48995 793 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 PAPOLAP51003 745 aaKnown RBP10.51□□□□□ -0.73
LCA5-203ENST00000467898 ETF1P62495 437 aaKnown RBP10.51□□□□□ -0.73
LCA5-203ENST00000467898 DRP2Q13474 957 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 SNCBQ16143 134 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 AFAP1L1Q8TED9 768 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 DDX20Q9UHI6 824 aaKnown RBP10.51□□□□□ -0.73
LCA5-203ENST00000467898 STRCP1A6NGW2 1772 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 SHTN1A0MZ66 631 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 GOLGA6L9A6NEM1 432 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 F8VZ95 297 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 PPFIA3O75145 1194 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 RASSF9O75901 435 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 IFFO1Q0D2I5 559 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 FAM114A1Q8IWE2 563 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 TMEM57Q8N5G2 664 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 LRRN4CLQ8ND94 238 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 RBM33Q96EV2 1170 aaKnown RBP10.51□□□□□ -0.73
LCA5-203ENST00000467898 RBM41Q96IZ5 413 aaKnown RBP10.51□□□□□ -0.73
LCA5-203ENST00000467898 SPATA7Q9P0W8 599 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 KIAA0754O94854 1291 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 YY1P25490 414 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 CCDC57Q2TAC2 916 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 PUS10Q3MIT2 529 aaKnown RBP10.51□□□□□ -0.73
LCA5-203ENST00000467898 VPS53Q5VIR6 699 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 MIS18BP1Q6P0N0 1132 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 C8orf58Q8NAV2 365 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 PAGR1Q9BTK6 254 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 GBP3Q9H0R5 595 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 ATP6V1DQ9Y5K8 247 aa10.51□□□□□ -0.73
LCA5-203ENST00000467898 KIF5CO60282 957 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 NLRP6P59044 892 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 CHD1LQ86WJ1 897 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 PHC3Q8NDX5 983 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 ARHGAP45Q92619 1136 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 EYA1Q99502 592 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 DDX19BQ9UMR2 479 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 WDR37Q9Y2I8 494 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 TMEM98Q9Y2Y6 226 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 MSH6P52701 1360 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 HOXC9P31274 260 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 TXLNAP40222 546 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 CCDC181Q5TID7 509 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 CCDC47Q96A33 483 aaKnown RBP10.5□□□□□ -0.73
LCA5-203ENST00000467898 PPP1R13BQ96KQ4 1090 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 PARD6BQ9BYG5 372 aa10.5□□□□□ -0.73
LCA5-203ENST00000467898 TRIM4Q9C037 500 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms