RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 TMEM39BQ9GZU3 492 aa15.21■□□□□ 0.03
VPS26A-204ENST00000467852 CD209Q9NNX6 404 aa15.21■□□□□ 0.03
VPS26A-204ENST00000467852 OGDHLQ9ULD0 1010 aa15.21■□□□□ 0.03
VPS26A-204ENST00000467852 SPEF2Q9C093 1822 aa15.21■□□□□ 0.03
VPS26A-204ENST00000467852 TCP10L2B9ZVM9 353 aa15.2■□□□□ 0.02
VPS26A-204ENST00000467852 HMGCRP04035 888 aa15.2■□□□□ 0.02
VPS26A-204ENST00000467852 MRPS5P82675 430 aaKnown RBP15.2■□□□□ 0.02
VPS26A-204ENST00000467852 CNGB1Q14028 1251 aaPredicted RBP15.2■□□□□ 0.02
VPS26A-204ENST00000467852 LRFN3Q9BTN0 628 aa15.2■□□□□ 0.02
VPS26A-204ENST00000467852 TDRD3Q9H7E2 651 aaKnown RBP15.2■□□□□ 0.02
VPS26A-204ENST00000467852 THEGQ9P2T0 379 aa15.2■□□□□ 0.02
VPS26A-204ENST00000467852 ARAP2Q8WZ64 1704 aa15.2■□□□□ 0.02
VPS26A-204ENST00000467852 CYP2C8P10632 490 aa15.19■□□□□ 0.02
VPS26A-204ENST00000467852 HSPA5P11021 654 aaKnown RBP15.19■□□□□ 0.02
VPS26A-204ENST00000467852 FKBP1AP62942 108 aaKnown RBP15.19■□□□□ 0.02
VPS26A-204ENST00000467852 LRRC26Q2I0M4 334 aa15.19■□□□□ 0.02
VPS26A-204ENST00000467852 HOOK2Q96ED9 719 aa15.19■□□□□ 0.02
VPS26A-204ENST00000467852 P2RX7Q99572 595 aaKnown RBP15.19■□□□□ 0.02
VPS26A-204ENST00000467852 PRKAG2Q9UGJ0 569 aa15.19■□□□□ 0.02
VPS26A-204ENST00000467852 SHHQ15465 462 aa15.18■□□□□ 0.02
VPS26A-204ENST00000467852 PER1O15534 1290 aaPredicted RBP15.17■□□□□ 0.02
VPS26A-204ENST00000467852 PCCAP05165 728 aaPredicted RBP15.17■□□□□ 0.02
VPS26A-204ENST00000467852 KLRK1P26718 216 aa15.17■□□□□ 0.02
VPS26A-204ENST00000467852 KCNJ4P48050 445 aa15.17■□□□□ 0.02
VPS26A-204ENST00000467852 PPM1EQ8WY54 764 aa15.17■□□□□ 0.02
VPS26A-204ENST00000467852 ANKRD2Q9GZV1 360 aa15.17■□□□□ 0.02
VPS26A-204ENST00000467852 KCNH4Q9UQ05 1017 aa15.17■□□□□ 0.02
VPS26A-204ENST00000467852 MYO9BQ13459 2157 aa15.17■□□□□ 0.02
VPS26A-204ENST00000467852 TCF20Q9UGU0 1960 aaKnown RBP15.16■□□□□ 0.02
VPS26A-204ENST00000467852 DNAH12Q6ZR08 3092 aa15.16■□□□□ 0.02
VPS26A-204ENST00000467852 COL6A1P12109 1028 aa15.16■□□□□ 0.02
VPS26A-204ENST00000467852 CHPF2Q9P2E5 772 aa15.16■□□□□ 0.02
VPS26A-204ENST00000467852 FBXO3Q9UK99 471 aa15.16■□□□□ 0.02
VPS26A-204ENST00000467852 TMEM31Q5JXX7 168 aa15.15■□□□□ 0.02
VPS26A-204ENST00000467852 DCAF15Q66K64 600 aa15.15■□□□□ 0.02
VPS26A-204ENST00000467852 SERPINA10Q9UK55 444 aa15.15■□□□□ 0.02
VPS26A-204ENST00000467852 IGHMBP2P38935 993 aaKnown RBP15.14■□□□□ 0.01
VPS26A-204ENST00000467852 MOGSQ13724 837 aa15.14■□□□□ 0.01
VPS26A-204ENST00000467852 GRIN2CQ14957 1233 aa15.14■□□□□ 0.01
VPS26A-204ENST00000467852 C9orf50Q5SZB4 431 aa15.14■□□□□ 0.01
VPS26A-204ENST00000467852 RIC3Q7Z5B4 369 aa15.14■□□□□ 0.01
VPS26A-204ENST00000467852 DZIP1LQ8IYY4 767 aaKnown RBP15.14■□□□□ 0.01
VPS26A-204ENST00000467852 JARID2Q92833 1246 aaPredicted RBP15.14■□□□□ 0.01
VPS26A-204ENST00000467852 MRE11P49959 708 aa15.13■□□□□ 0.01
VPS26A-204ENST00000467852 CTSWP56202 376 aa15.13■□□□□ 0.01
VPS26A-204ENST00000467852 GPAT2Q6NUI2 795 aa15.13■□□□□ 0.01
VPS26A-204ENST00000467852 CCDC191Q8NCU4 936 aa15.13■□□□□ 0.01
VPS26A-204ENST00000467852 ZNF341Q9BYN7 854 aa15.13■□□□□ 0.01
VPS26A-204ENST00000467852 BABAM1Q9NWV8 329 aa15.13■□□□□ 0.01
VPS26A-204ENST00000467852 MYH3P11055 1940 aa15.12■□□□□ 0.01
VPS26A-204ENST00000467852 TRIM32Q13049 653 aa15.12■□□□□ 0.01
VPS26A-204ENST00000467852 PDE3AQ14432 1141 aa15.12■□□□□ 0.01
VPS26A-204ENST00000467852 NFE2L2Q16236 605 aa15.12■□□□□ 0.01
VPS26A-204ENST00000467852 FASTKD5Q7L8L6 764 aaKnown RBP15.12■□□□□ 0.01
VPS26A-204ENST00000467852 ZNF804AQ7Z570 1209 aa15.12■□□□□ 0.01
VPS26A-204ENST00000467852 SMCR8Q8TEV9 937 aaPredicted RBP15.12■□□□□ 0.01
VPS26A-204ENST00000467852 GAS2L1Q99501 681 aaPredicted RBP15.12■□□□□ 0.01
VPS26A-204ENST00000467852 DBF4Q9UBU7 674 aaPredicted RBP15.12■□□□□ 0.01
VPS26A-204ENST00000467852 TTF2Q9UNY4 1162 aaKnown RBP15.12■□□□□ 0.01
VPS26A-204ENST00000467852 IL1R1P14778 569 aa15.11■□□□□ 0.01
VPS26A-204ENST00000467852 TTLL11Q8NHH1 800 aa15.11■□□□□ 0.01
VPS26A-204ENST00000467852 GREM2Q9H772 168 aa15.11■□□□□ 0.01
VPS26A-204ENST00000467852 HYPKQ9NX55 129 aa15.11■□□□□ 0.01
VPS26A-204ENST00000467852 CWC25Q9NXE8 425 aaPredicted RBP15.11■□□□□ 0.01
VPS26A-204ENST00000467852 JAG2Q9Y219 1238 aa15.11■□□□□ 0.01
VPS26A-204ENST00000467852 CXCL11O14625 94 aa15.1■□□□□ 0.01
VPS26A-204ENST00000467852 INPP5BP32019 993 aa15.1■□□□□ 0.01
VPS26A-204ENST00000467852 AKNAD1Q5T1N1 836 aa15.1■□□□□ 0.01
VPS26A-204ENST00000467852 NECAB3Q96P71 396 aaPredicted RBP15.1■□□□□ 0.01
VPS26A-204ENST00000467852 MPHOSPH8Q99549 860 aa15.1■□□□□ 0.01
VPS26A-204ENST00000467852 MYD88Q99836 296 aa15.1■□□□□ 0.01
VPS26A-204ENST00000467852 EPHX3Q9H6B9 360 aa15.1■□□□□ 0.01
VPS26A-204ENST00000467852 LTBP2Q14767 1821 aa15.1■□□□□ 0.01
VPS26A-204ENST00000467852 GOLGA2Q08379 1002 aa15.09■□□□□ 0.01
VPS26A-204ENST00000467852 HDGFL1Q5TGJ6 251 aa15.09■□□□□ 0.01
VPS26A-204ENST00000467852 MIGA2Q7L4E1 593 aa15.09■□□□□ 0.01
VPS26A-204ENST00000467852 ANKRD13CQ8N6S4 541 aa15.09■□□□□ 0.01
VPS26A-204ENST00000467852 SENP6Q9GZR1 1112 aaPredicted RBP15.09■□□□□ 0.01
VPS26A-204ENST00000467852 SLC45A1Q9Y2W3 748 aa15.09■□□□□ 0.01
VPS26A-204ENST00000467852 AK9Q5TCS8 1911 aa15.09■□□□□ 0.01
VPS26A-204ENST00000467852 MAST2Q6P0Q8 1798 aa15.08■□□□□ 0.01
VPS26A-204ENST00000467852 PRKAR2AP13861 404 aaKnown RBP15.08■□□□□ 0
VPS26A-204ENST00000467852 CRKP46108 304 aa15.08■□□□□ 0
VPS26A-204ENST00000467852 TSPYL2Q9H2G4 693 aaPredicted RBP15.08■□□□□ 0
VPS26A-204ENST00000467852 ZNF576Q9H609 170 aa15.08■□□□□ 0
VPS26A-204ENST00000467852 TMOD2Q9NZR1 351 aa15.08■□□□□ 0
VPS26A-204ENST00000467852 CHRNDQ07001 517 aa15.07■□□□□ 0
VPS26A-204ENST00000467852 MFSD14BQ5SR56 506 aa15.07■□□□□ 0
VPS26A-204ENST00000467852 POTEEQ6S8J3 1075 aa15.07■□□□□ 0
VPS26A-204ENST00000467852 GADL1Q6ZQY3 521 aa15.07■□□□□ 0
VPS26A-204ENST00000467852 C15orf52Q6ZUT6 534 aaKnown RBP15.07■□□□□ 0
VPS26A-204ENST00000467852 FAM83AQ86UY5 434 aa15.07■□□□□ 0
VPS26A-204ENST00000467852 TIMELESSQ9UNS1 1208 aa15.07■□□□□ 0
VPS26A-204ENST00000467852 HAX1O00165 279 aa15.06■□□□□ 0
VPS26A-204ENST00000467852 GPR37L1O60883 481 aa15.06■□□□□ 0
VPS26A-204ENST00000467852 VASPP50552 380 aaPredicted RBP15.06■□□□□ 0
VPS26A-204ENST00000467852 CACNB3P54284 484 aa15.06■□□□□ 0
VPS26A-204ENST00000467852 FAM110CQ1W6H9 321 aa15.06■□□□□ 0
VPS26A-204ENST00000467852 MAP3K21Q5TCX8 1036 aa15.06■□□□□ 0
VPS26A-204ENST00000467852 GJD2Q9UKL4 321 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms