RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 MOGSQ13724 837 aa8.3□□□□□ -1.08
PTPRE-206ENST00000467366 TNFAIP1Q13829 316 aa8.3□□□□□ -1.08
PTPRE-206ENST00000467366 KRT24Q2M2I5 525 aa8.3□□□□□ -1.08
PTPRE-206ENST00000467366 MYH3P11055 1940 aa8.3□□□□□ -1.08
PTPRE-206ENST00000467366 TNPO2O14787 897 aaKnown RBP8.29□□□□□ -1.08
PTPRE-206ENST00000467366 PCCAP05165 728 aaPredicted RBP8.29□□□□□ -1.08
PTPRE-206ENST00000467366 RBM10P98175 930 aaKnown RBP8.29□□□□□ -1.08
PTPRE-206ENST00000467366 TRIM32Q13049 653 aa8.29□□□□□ -1.08
PTPRE-206ENST00000467366 LRRC26Q2I0M4 334 aa8.29□□□□□ -1.08
PTPRE-206ENST00000467366 ALYREFQ86V81 257 aaKnown RBP8.29□□□□□ -1.08
PTPRE-206ENST00000467366 WRNIP1Q96S55 665 aa8.29□□□□□ -1.08
PTPRE-206ENST00000467366 CDC5LQ99459 802 aaKnown RBP8.29□□□□□ -1.08
PTPRE-206ENST00000467366 JAG2Q9Y219 1238 aa8.29□□□□□ -1.08
PTPRE-206ENST00000467366 ARIH1Q9Y4X5 557 aaPredicted RBP8.29□□□□□ -1.08
PTPRE-206ENST00000467366 A0A1B0GUL6 1792 aa8.29□□□□□ -1.08
PTPRE-206ENST00000467366 BDP1A6H8Y1 2624 aa8.28□□□□□ -1.08
PTPRE-206ENST00000467366 A0A0U1RQG5 324 aaPredicted RBP8.28□□□□□ -1.08
PTPRE-206ENST00000467366 SNAP23O00161 211 aa8.28□□□□□ -1.08
PTPRE-206ENST00000467366 COL6A1P12109 1028 aa8.28□□□□□ -1.08
PTPRE-206ENST00000467366 PPATQ06203 517 aa8.28□□□□□ -1.08
PTPRE-206ENST00000467366 NFE2L2Q16236 605 aa8.28□□□□□ -1.08
PTPRE-206ENST00000467366 GPAT2Q6NUI2 795 aa8.28□□□□□ -1.08
PTPRE-206ENST00000467366 ADAMTS19Q8TE59 1207 aa8.28□□□□□ -1.08
PTPRE-206ENST00000467366 OGDHLQ9ULD0 1010 aa8.28□□□□□ -1.08
PTPRE-206ENST00000467366 SHHQ15465 462 aa8.27□□□□□ -1.09
PTPRE-206ENST00000467366 C9orf50Q5SZB4 431 aa8.27□□□□□ -1.09
PTPRE-206ENST00000467366 TTLL11Q8NHH1 800 aa8.27□□□□□ -1.09
PTPRE-206ENST00000467366 PLEKHF1Q96S99 279 aa8.27□□□□□ -1.09
PTPRE-206ENST00000467366 UHRF1Q96T88 793 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-206ENST00000467366 PARK7Q99497 189 aaKnown RBP8.27□□□□□ -1.09
PTPRE-206ENST00000467366 MYD88Q99836 296 aa8.27□□□□□ -1.09
PTPRE-206ENST00000467366 LBHD1Q9BQE6 289 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-206ENST00000467366 C1QTNF1Q9BXJ1 281 aa8.27□□□□□ -1.09
PTPRE-206ENST00000467366 GREM2Q9H772 168 aa8.27□□□□□ -1.09
PTPRE-206ENST00000467366 HMX1Q9NP08 348 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-206ENST00000467366 KCNH4Q9UQ05 1017 aa8.27□□□□□ -1.09
PTPRE-206ENST00000467366 AK9Q5TCS8 1911 aa8.27□□□□□ -1.09
PTPRE-206ENST00000467366 PLXNB2O15031 1838 aa8.26□□□□□ -1.09
PTPRE-206ENST00000467366 HMGCRP04035 888 aa8.26□□□□□ -1.09
PTPRE-206ENST00000467366 INPP5BP32019 993 aa8.26□□□□□ -1.09
PTPRE-206ENST00000467366 DEKP35659 375 aaKnown RBP8.26□□□□□ -1.09
PTPRE-206ENST00000467366 TNNI2P48788 182 aa8.26□□□□□ -1.09
PTPRE-206ENST00000467366 CTSWP56202 376 aa8.26□□□□□ -1.09
PTPRE-206ENST00000467366 FKBP1AP62942 108 aaKnown RBP8.26□□□□□ -1.09
PTPRE-206ENST00000467366 SMAD3P84022 425 aaKnown RBP8.26□□□□□ -1.09
PTPRE-206ENST00000467366 RIC3Q7Z5B4 369 aa8.26□□□□□ -1.09
PTPRE-206ENST00000467366 DZIP1LQ8IYY4 767 aaKnown RBP8.26□□□□□ -1.09
PTPRE-206ENST00000467366 ASB2Q96Q27 587 aa8.26□□□□□ -1.09
PTPRE-206ENST00000467366 LRFN3Q9BTN0 628 aa8.26□□□□□ -1.09
PTPRE-206ENST00000467366 ZMYND15Q9H091 742 aa8.26□□□□□ -1.09
PTPRE-206ENST00000467366 HCN4Q9Y3Q4 1203 aa8.26□□□□□ -1.09
PTPRE-206ENST00000467366 FRMPD3Q5JV73 1810 aa8.26□□□□□ -1.09
PTPRE-206ENST00000467366 DOCK3Q8IZD9 2030 aa8.25□□□□□ -1.09
PTPRE-206ENST00000467366 CLSTN1O94985 981 aa8.25□□□□□ -1.09
PTPRE-206ENST00000467366 NEFMP07197 916 aa8.25□□□□□ -1.09
PTPRE-206ENST00000467366 IL1R1P14778 569 aa8.25□□□□□ -1.09
PTPRE-206ENST00000467366 CACNB3P54284 484 aa8.25□□□□□ -1.09
PTPRE-206ENST00000467366 GRIN2CQ14957 1233 aa8.25□□□□□ -1.09
PTPRE-206ENST00000467366 HDGFL1Q5TGJ6 251 aa8.25□□□□□ -1.09
PTPRE-206ENST00000467366 CCDC191Q8NCU4 936 aa8.25□□□□□ -1.09
PTPRE-206ENST00000467366 CCER1Q8TC90 406 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-206ENST00000467366 ATXN2LQ8WWM7 1075 aaKnown RBP8.25□□□□□ -1.09
PTPRE-206ENST00000467366 PPM1EQ8WY54 764 aa8.25□□□□□ -1.09
PTPRE-206ENST00000467366 CCDC136Q96JN2 1154 aa8.25□□□□□ -1.09
PTPRE-206ENST00000467366 DNAH12Q6ZR08 3092 aa8.24□□□□□ -1.09
PTPRE-206ENST00000467366 NCLP19338 710 aaKnown RBP8.24□□□□□ -1.09
PTPRE-206ENST00000467366 KCNJ4P48050 445 aa8.24□□□□□ -1.09
PTPRE-206ENST00000467366 MIGA2Q7L4E1 593 aa8.24□□□□□ -1.09
PTPRE-206ENST00000467366 COA7Q96BR5 231 aa8.24□□□□□ -1.09
PTPRE-206ENST00000467366 NECAB3Q96P71 396 aaPredicted RBP8.24□□□□□ -1.09
PTPRE-206ENST00000467366 ANKRD2Q9GZV1 360 aa8.24□□□□□ -1.09
PTPRE-206ENST00000467366 PHAXQ9H814 394 aaKnown RBP8.24□□□□□ -1.09
PTPRE-206ENST00000467366 BABAM1Q9NWV8 329 aa8.24□□□□□ -1.09
PTPRE-206ENST00000467366 HYPKQ9NX55 129 aa8.24□□□□□ -1.09
PTPRE-206ENST00000467366 CWC25Q9NXE8 425 aaPredicted RBP8.24□□□□□ -1.09
PTPRE-206ENST00000467366 THEGQ9P2T0 379 aa8.24□□□□□ -1.09
PTPRE-206ENST00000467366 DBF4Q9UBU7 674 aaPredicted RBP8.24□□□□□ -1.09
PTPRE-206ENST00000467366 SERPINA10Q9UK55 444 aa8.24□□□□□ -1.09
PTPRE-206ENST00000467366 TTF2Q9UNY4 1162 aaKnown RBP8.24□□□□□ -1.09
PTPRE-206ENST00000467366 PTPRFP10586 1907 aa8.23□□□□□ -1.09
PTPRE-206ENST00000467366 TAF5LO75529 589 aa8.23□□□□□ -1.09
PTPRE-206ENST00000467366 PPP2R1AP30153 589 aa8.23□□□□□ -1.09
PTPRE-206ENST00000467366 IGHMBP2P38935 993 aaKnown RBP8.23□□□□□ -1.09
PTPRE-206ENST00000467366 CRKP46108 304 aa8.23□□□□□ -1.09
PTPRE-206ENST00000467366 CHRNDQ07001 517 aa8.23□□□□□ -1.09
PTPRE-206ENST00000467366 C15orf52Q6ZUT6 534 aaKnown RBP8.23□□□□□ -1.09
PTPRE-206ENST00000467366 MRPS5P82675 430 aaKnown RBP8.22□□□□□ -1.09
PTPRE-206ENST00000467366 GRIK5Q16478 980 aa8.22□□□□□ -1.09
PTPRE-206ENST00000467366 MFSD14BQ5SR56 506 aa8.22□□□□□ -1.09
PTPRE-206ENST00000467366 POTEEQ6S8J3 1075 aa8.22□□□□□ -1.09
PTPRE-206ENST00000467366 ZNF804AQ7Z570 1209 aa8.22□□□□□ -1.09
PTPRE-206ENST00000467366 ANKRD13CQ8N6S4 541 aa8.22□□□□□ -1.09
PTPRE-206ENST00000467366 TRIB2Q92519 343 aa8.22□□□□□ -1.09
PTPRE-206ENST00000467366 ZNF341Q9BYN7 854 aa8.22□□□□□ -1.09
PTPRE-206ENST00000467366 EPHX3Q9H6B9 360 aa8.22□□□□□ -1.09
PTPRE-206ENST00000467366 ZNF112Q9UJU3 913 aa8.22□□□□□ -1.09
PTPRE-206ENST00000467366 GJD2Q9UKL4 321 aa8.22□□□□□ -1.09
PTPRE-206ENST00000467366 TCF20Q9UGU0 1960 aaKnown RBP8.22□□□□□ -1.09
PTPRE-206ENST00000467366 CXCL11O14625 94 aa8.21□□□□□ -1.1
PTPRE-206ENST00000467366 PRKAR2AP13861 404 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms