RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 CASZ1Q86V15 1759 aa17.14■□□□□ 0.33
PRPF38B-204ENST00000467302 KCNQ4P56696 695 aa17.14■□□□□ 0.33
PRPF38B-204ENST00000467302 TPD52L1Q16890 204 aaPredicted RBP17.14■□□□□ 0.33
PRPF38B-204ENST00000467302 PTF1AQ7RTS3 328 aa17.14■□□□□ 0.33
PRPF38B-204ENST00000467302 CEP57L1Q8IYX8 460 aa17.14■□□□□ 0.33
PRPF38B-204ENST00000467302 LINC00301Q8NCQ3 95 aa17.14■□□□□ 0.33
PRPF38B-204ENST00000467302 LPIN2Q92539 896 aa17.14■□□□□ 0.33
PRPF38B-204ENST00000467302 GPHNQ9NQX3 736 aaPredicted RBP17.14■□□□□ 0.33
PRPF38B-204ENST00000467302 TRPC5Q9UL62 973 aaPredicted RBP17.14■□□□□ 0.33
PRPF38B-204ENST00000467302 ZSCAN20P17040 1043 aaPredicted RBP17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 WASHC4Q2M389 1173 aa17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 HELBQ8NG08 1087 aaPredicted RBP17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 SEC31BQ9NQW1 1179 aa17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 CTNNA3Q9UI47 895 aa17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 NEDD4P46934 1319 aa17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 ONECUT3O60422 494 aaPredicted RBP17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 RPS6KA4O75676 772 aa17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 IGHMBP2P38935 993 aaKnown RBP17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 MCAMP43121 646 aa17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 NYAP1Q6ZVC0 841 aa17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 KCND1Q9NSA2 647 aa17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 CCNL1Q9UK58 526 aaPredicted RBP17.13■□□□□ 0.33
PRPF38B-204ENST00000467302 UQCRFS1P1P0C7P4 283 aa17.12■□□□□ 0.33
PRPF38B-204ENST00000467302 SKILP12757 684 aa17.12■□□□□ 0.33
PRPF38B-204ENST00000467302 FGFR2P21802 821 aa17.12■□□□□ 0.33
PRPF38B-204ENST00000467302 NDUFA8P51970 172 aa17.12■□□□□ 0.33
PRPF38B-204ENST00000467302 CBX1P83916 185 aa17.12■□□□□ 0.33
PRPF38B-204ENST00000467302 CCZ1BP86790 482 aa17.12■□□□□ 0.33
PRPF38B-204ENST00000467302 CCZ1P86791 482 aaPredicted RBP17.12■□□□□ 0.33
PRPF38B-204ENST00000467302 PI16Q6UXB8 463 aa17.12■□□□□ 0.33
PRPF38B-204ENST00000467302 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.12■□□□□ 0.33
PRPF38B-204ENST00000467302 NAT10Q9H0A0 1025 aaKnown RBP17.12■□□□□ 0.33
PRPF38B-204ENST00000467302 POLR3EQ9NVU0 708 aa17.12■□□□□ 0.33
PRPF38B-204ENST00000467302 HPS5Q9UPZ3 1129 aa17.12■□□□□ 0.33
PRPF38B-204ENST00000467302 USP27XA6NNY8 438 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 YEATS4O95619 227 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 SLC5A1P13866 664 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 TTF1Q15361 905 aaPredicted RBP17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 CEP135Q66GS9 1140 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 CCDC102BQ68D86 513 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 MB21D2Q8IYB1 491 aaPredicted RBP17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 AOPEPQ8N6M6 819 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 CCDC112Q8NEF3 446 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 FBXO18Q8NFZ0 1043 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 ERCC4Q92889 916 aaPredicted RBP17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 NARFQ9UHQ1 456 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 CLIC4Q9Y696 253 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 C4BP0C0L5 1744 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 A0A1B0GVL5 298 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 CCDC69A6NI79 296 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 FGAP02671 866 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 ARID4AP29374 1257 aaPredicted RBP17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 PHKA1P46020 1223 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 IMMTQ16891 758 aaKnown RBP17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 OTUD7BQ6GQQ9 843 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 KCNG4Q8TDN1 519 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 APPBP2Q92624 585 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 BPIFA3Q9BQP9 254 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 PRDM10Q9NQV6 1147 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 KIAA1468Q9P260 1216 aa17.11■□□□□ 0.33
PRPF38B-204ENST00000467302 A0A1B0GUL6 1792 aa17.1■□□□□ 0.33
PRPF38B-204ENST00000467302 DMTNQ08495 405 aa17.1■□□□□ 0.33
PRPF38B-204ENST00000467302 UTP14CQ5TAP6 766 aaKnown RBP17.1■□□□□ 0.33
PRPF38B-204ENST00000467302 NBPF11Q86T75 865 aa17.1■□□□□ 0.33
PRPF38B-204ENST00000467302 C8orf76Q96K31 380 aa17.1■□□□□ 0.33
PRPF38B-204ENST00000467302 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
PRPF38B-204ENST00000467302 SDF4Q9BRK5 362 aa17.1■□□□□ 0.33
PRPF38B-204ENST00000467302 OSBPL5Q9H0X9 879 aaPredicted RBP17.1■□□□□ 0.33
PRPF38B-204ENST00000467302 C4AP0C0L4 1744 aa17.1■□□□□ 0.33
PRPF38B-204ENST00000467302 GNPATO15228 680 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 PRC1O43663 620 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 DHX16O60231 1041 aaKnown RBP17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 U2AF2P26368 475 aaKnown RBP eCLIP17.09■□□□□ 0.333e-9■■■□□ 18.3
PRPF38B-204ENST00000467302 ANTXR2P58335 489 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 FAM182BQ5T319 152 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 BRAPQ7Z569 592 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 FILIP1Q7Z7B0 1213 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 HAND2P61296 217 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 ERFEQ4G0M1 354 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 MYSM1Q5VVJ2 828 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 SEPT12Q8IYM1 358 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 FEZ1Q99689 392 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 NYXQ9GZU5 481 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 RTCBQ9Y3I0 505 aaKnown RBP17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 WDR19Q8NEZ3 1342 aa17.09■□□□□ 0.33
PRPF38B-204ENST00000467302 KLF18A0A0U1RQI7 1052 aa17.08■□□□□ 0.33
PRPF38B-204ENST00000467302 SPTLC2O15270 562 aa17.08■□□□□ 0.33
PRPF38B-204ENST00000467302 POLR3DP05423 398 aaPredicted RBP17.08■□□□□ 0.33
PRPF38B-204ENST00000467302 GSDMDP57764 484 aa17.08■□□□□ 0.33
PRPF38B-204ENST00000467302 STK38Q15208 465 aa17.08■□□□□ 0.33
PRPF38B-204ENST00000467302 SF3B3Q15393 1217 aaKnown RBP17.08■□□□□ 0.33
PRPF38B-204ENST00000467302 DPCR1Q3MIW9 517 aa17.08■□□□□ 0.33
PRPF38B-204ENST00000467302 AEBP2Q6ZN18 517 aaPredicted RBP17.08■□□□□ 0.33
PRPF38B-204ENST00000467302 RGS22Q8NE09 1264 aa17.08■□□□□ 0.33
PRPF38B-204ENST00000467302 PUS7LQ9H0K6 701 aaKnown RBP17.08■□□□□ 0.33
PRPF38B-204ENST00000467302 IMPACTQ9P2X3 320 aa17.08■□□□□ 0.33
PRPF38B-204ENST00000467302 ORC3Q9UBD5 711 aaPredicted RBP17.08■□□□□ 0.33
PRPF38B-204ENST00000467302 DOCK2Q92608 1830 aa17.08■□□□□ 0.32
PRPF38B-204ENST00000467302 GOLGA8BA8MQT2 603 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms