RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 RPGRQ92834 1020 aaKnown RBP11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 STRBPQ96SI9 672 aaKnown RBP11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 BRIP1Q9BX63 1249 aa11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 AGXT2Q9BYV1 514 aa11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 UBR3Q6ZT12 1888 aa11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 COL4A1P02462 1669 aa11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 XDHP47989 1333 aa11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 E7EWF7 191 aa11.32□□□□□ -0.6
APOBEC1-202ENST00000467171 EXOSC10Q01780 885 aaKnown RBP11.32□□□□□ -0.6
APOBEC1-202ENST00000467171 STOX1Q6ZVD7 989 aa11.32□□□□□ -0.6
APOBEC1-202ENST00000467171 MAGEB6Q8N7X4 407 aa11.32□□□□□ -0.6
APOBEC1-202ENST00000467171 GPHNQ9NQX3 736 aaPredicted RBP11.32□□□□□ -0.6
APOBEC1-202ENST00000467171 WDR19Q8NEZ3 1342 aa11.32□□□□□ -0.6
APOBEC1-202ENST00000467171 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
APOBEC1-202ENST00000467171 BRD1O95696 1058 aa11.31□□□□□ -0.6
APOBEC1-202ENST00000467171 ATP2B4P23634 1241 aa11.31□□□□□ -0.6
APOBEC1-202ENST00000467171 LSM11P83369 360 aaKnown RBP eCLIP11.31□□□□□ -0.6
APOBEC1-202ENST00000467171 TOB2Q14106 344 aaPredicted RBP11.31□□□□□ -0.6
APOBEC1-202ENST00000467171 ME3Q16798 604 aa11.31□□□□□ -0.6
APOBEC1-202ENST00000467171 PTCD2Q8WV60 388 aaKnown RBP11.31□□□□□ -0.6
APOBEC1-202ENST00000467171 AIDAQ96BJ3 306 aa11.31□□□□□ -0.6
APOBEC1-202ENST00000467171 CAMKK2Q96RR4 588 aa11.31□□□□□ -0.6
APOBEC1-202ENST00000467171 PODXL2Q9NZ53 605 aa11.31□□□□□ -0.6
APOBEC1-202ENST00000467171 LRP2BPQ9P2M1 347 aa11.31□□□□□ -0.6
APOBEC1-202ENST00000467171 TPCN1Q9ULQ1 816 aa11.31□□□□□ -0.6
APOBEC1-202ENST00000467171 TTLL5Q6EMB2 1281 aa11.3□□□□□ -0.6
APOBEC1-202ENST00000467171 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
APOBEC1-202ENST00000467171 CHMP4CQ96CF2 233 aa11.3□□□□□ -0.6
APOBEC1-202ENST00000467171 ZDHHC9Q9Y397 364 aa11.3□□□□□ -0.6
APOBEC1-202ENST00000467171 AKAP11Q9UKA4 1901 aa11.3□□□□□ -0.6
APOBEC1-202ENST00000467171 SALL1Q9NSC2 1324 aa11.3□□□□□ -0.6
APOBEC1-202ENST00000467171 PSDA5PKW4 1024 aaPredicted RBP11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 WTIPA6NIX2 430 aaPredicted RBP11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 ZNF213O14771 459 aa11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 MBD4O95243 580 aa11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 LARGE1O95461 756 aa11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 KLRK1P26718 216 aa11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 EVCP57679 992 aa11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 COL9A3Q14050 684 aaPredicted RBP11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 Q6ZUG5 572 aa11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 SP8Q8IXZ3 490 aa11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 PLPP6Q8IY26 295 aa11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 MB21D2Q8IYB1 491 aaPredicted RBP11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 NACAP1Q9BZK3 213 aa11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 ANKIB1Q9P2G1 1089 aa11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 SMC3Q9UQE7 1217 aa11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 COL1A1P02452 1464 aaPredicted RBP11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 WDR33Q9C0J8 1336 aaKnown RBP11.29□□□□□ -0.6
APOBEC1-202ENST00000467171 TNRC6CQ9HCJ0 1690 aaKnown RBP11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 GOLGA6L22H0YM25 854 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 BAG4O95429 457 aaKnown RBP11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 NPR1P16066 1061 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 CYP7A1P22680 504 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 PDE6BP35913 854 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 PKP1Q13835 747 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 SLC15A2Q16348 729 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 SPTY2D1Q68D10 685 aaPredicted RBP11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 GIMAP6Q6P9H5 292 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 ZNF804AQ7Z570 1209 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 CCDC83Q8IWF9 413 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 IFNL3Q8IZI9 196 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 TDRD7Q8NHU6 1098 aaKnown RBP11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 NCOA7Q8NI08 942 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 WDR66Q8TBY9 1149 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 ZNF274Q96GC6 653 aaPredicted RBP11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 RAI14Q9P0K7 980 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 GGA1Q9UJY5 639 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 PARP3Q9Y6F1 533 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 RGPD3A6NKT7 1758 aaPredicted RBP11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 RGPD4Q7Z3J3 1758 aa11.28□□□□□ -0.6
APOBEC1-202ENST00000467171 A0A0G2JLW4 131 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 GSG1L2A8MUP6 293 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 PFKFB2O60825 505 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 MMP10P09238 476 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 SRGNP10124 158 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 MCM5P33992 734 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 GPSM2P81274 684 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 SKOR2Q2VWA4 1001 aaPredicted RBP11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 TXNRD3Q86VQ6 643 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 GTF3C6Q969F1 213 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 TCEANC2Q96MN5 208 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 RIOK1Q9BRS2 568 aaKnown RBP11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 LLPHQ9BRT6 129 aaKnown RBP11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 ARMT1Q9H993 441 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 EPB41L4AQ9HCS5 686 aaPredicted RBP11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 STK32BQ9NY57 414 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 ABCF2Q9UG63 623 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 IQSEC3Q9UPP2 1182 aaPredicted RBP11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 ATP6V0A2Q9Y487 856 aa11.27□□□□□ -0.61
APOBEC1-202ENST00000467171 MAGEB6P1A0A0J9YX57 407 aa11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 PPEF1O14829 653 aaPredicted RBP11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 APPP05067 770 aa11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 IL1R1P14778 569 aa11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 PDCP20941 246 aa11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 ALDH1B1P30837 517 aa11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 TRDNQ13061 729 aa11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 DSG2Q14126 1118 aa11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 NAA16Q6N069 864 aaPredicted RBP11.26□□□□□ -0.61
APOBEC1-202ENST00000467171 RALYLQ86SE5 291 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms