RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 C8orf86Q6ZUL3 223 aa6.18□□□□□ -1.42
VPS13A-209ENST00000467124 ANKS3Q6ZW76 656 aa6.18□□□□□ -1.42
VPS13A-209ENST00000467124 CKAP2LQ8IYA6 745 aa6.18□□□□□ -1.42
VPS13A-209ENST00000467124 IL22RA1Q8N6P7 574 aa6.18□□□□□ -1.42
VPS13A-209ENST00000467124 KLHL23Q8NBE8 558 aa6.18□□□□□ -1.42
VPS13A-209ENST00000467124 ARMC5Q96C12 935 aa6.18□□□□□ -1.42
VPS13A-209ENST00000467124 SEC16BQ96JE7 1060 aa6.18□□□□□ -1.42
VPS13A-209ENST00000467124 BTBD6Q96KE9 485 aa6.18□□□□□ -1.42
VPS13A-209ENST00000467124 HIRIP3Q9BW71 556 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-209ENST00000467124 MIR1-1HGQ9H1L0 117 aa6.18□□□□□ -1.42
VPS13A-209ENST00000467124 SOX1O00570 391 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-209ENST00000467124 ECEL1O95672 775 aa6.17□□□□□ -1.42
VPS13A-209ENST00000467124 CELA2BP08218 269 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-209ENST00000467124 AMPD1P23109 780 aa6.17□□□□□ -1.42
VPS13A-209ENST00000467124 BAG6P46379 1132 aa6.17□□□□□ -1.42
VPS13A-209ENST00000467124 DGKGP49619 791 aa6.17□□□□□ -1.42
VPS13A-209ENST00000467124 GSTM4Q03013 218 aa6.17□□□□□ -1.42
VPS13A-209ENST00000467124 COL9A2Q14055 689 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-209ENST00000467124 MAP1SQ66K74 1059 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-209ENST00000467124 GK5Q6ZS86 529 aa6.17□□□□□ -1.42
VPS13A-209ENST00000467124 C1orf229Q6ZS94 237 aaPredicted RBP6.17□□□□□ -1.42
VPS13A-209ENST00000467124 TRIM42Q8IWZ5 723 aa6.17□□□□□ -1.42
VPS13A-209ENST00000467124 CARD10Q9BWT7 1032 aa6.17□□□□□ -1.42
VPS13A-209ENST00000467124 BRMS1Q9HCU9 246 aa6.17□□□□□ -1.42
VPS13A-209ENST00000467124 ROBO2Q9HCK4 1378 aa6.17□□□□□ -1.42
VPS13A-209ENST00000467124 SPDYE3A6NKU9 549 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 SHISA8B8ZZ34 492 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 LINC01387J3KSC0 135 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 GRIN3BO60391 1043 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 CYP11A1P05108 521 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 NID1P14543 1247 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 ARNTP27540 789 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 GMPRP36959 345 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 SOX9P48436 509 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 C19orf57Q0VDD7 668 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 LLGL2Q6P1M3 1020 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 KCNB2Q92953 911 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 FERD3LQ96RJ6 166 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 SRRTQ9BXP5 876 aaKnown RBP6.16□□□□□ -1.42
VPS13A-209ENST00000467124 LRRC3Q9BY71 257 aa6.16□□□□□ -1.42
VPS13A-209ENST00000467124 SMAD7O15105 426 aaKnown RBP6.15□□□□□ -1.42
VPS13A-209ENST00000467124 CLCQ05315 142 aa6.15□□□□□ -1.42
VPS13A-209ENST00000467124 TREML4Q6UXN2 200 aa6.15□□□□□ -1.42
VPS13A-209ENST00000467124 ILDR2Q71H61 639 aa6.15□□□□□ -1.42
VPS13A-209ENST00000467124 FAM169BQ8N8A8 192 aa6.15□□□□□ -1.42
VPS13A-209ENST00000467124 GATAD2BQ8WXI9 593 aa6.15□□□□□ -1.42
VPS13A-209ENST00000467124 ST7Q9NRC1 585 aa6.15□□□□□ -1.42
VPS13A-209ENST00000467124 KRT82Q9NSB4 513 aa6.15□□□□□ -1.42
VPS13A-209ENST00000467124 FAM221AA4D161 298 aa6.14□□□□□ -1.43
VPS13A-209ENST00000467124 K7ELQ4 463 aaPredicted RBP6.14□□□□□ -1.43
VPS13A-209ENST00000467124 FSCN2O14926 492 aa6.14□□□□□ -1.43
VPS13A-209ENST00000467124 TRIM37O94972 964 aa6.14□□□□□ -1.43
VPS13A-209ENST00000467124 BPNT1O95861 308 aa6.14□□□□□ -1.43
VPS13A-209ENST00000467124 ZNF252P-AS1Q0IIN9 211 aa6.14□□□□□ -1.43
VPS13A-209ENST00000467124 LYPD4Q6UWN0 246 aa6.14□□□□□ -1.43
VPS13A-209ENST00000467124 ZNF662Q6ZS27 426 aa6.14□□□□□ -1.43
VPS13A-209ENST00000467124 GAL3ST3Q96A11 431 aa6.14□□□□□ -1.43
VPS13A-209ENST00000467124 TRIM55Q9BYV6 548 aa6.14□□□□□ -1.43
VPS13A-209ENST00000467124 NRSN2Q9GZP1 204 aa6.14□□□□□ -1.43
VPS13A-209ENST00000467124 STRIP2Q9ULQ0 834 aa6.14□□□□□ -1.43
VPS13A-209ENST00000467124 CDK11AQ9UQ88 783 aaPredicted RBP6.14□□□□□ -1.43
VPS13A-209ENST00000467124 WIPF1O43516 503 aa6.13□□□□□ -1.43
VPS13A-209ENST00000467124 GSTP1P09211 210 aaKnown RBP6.13□□□□□ -1.43
VPS13A-209ENST00000467124 COL9A3Q14050 684 aaPredicted RBP6.13□□□□□ -1.43
VPS13A-209ENST00000467124 SUZ12Q15022 739 aaKnown RBP6.13□□□□□ -1.43
VPS13A-209ENST00000467124 CWF19L2Q2TBE0 894 aaKnown RBP6.13□□□□□ -1.43
VPS13A-209ENST00000467124 LCE2CQ5TA81 110 aa6.13□□□□□ -1.43
VPS13A-209ENST00000467124 REC114Q7Z4M0 266 aa6.13□□□□□ -1.43
VPS13A-209ENST00000467124 NOP9Q86U38 636 aaKnown RBP6.13□□□□□ -1.43
VPS13A-209ENST00000467124 PDZD3Q86UT5 571 aa6.13□□□□□ -1.43
VPS13A-209ENST00000467124 JAZF1Q86VZ6 243 aa6.13□□□□□ -1.43
VPS13A-209ENST00000467124 SLITRK4Q8IW52 837 aa6.13□□□□□ -1.43
VPS13A-209ENST00000467124 ACSBG1Q96GR2 724 aa6.13□□□□□ -1.43
VPS13A-209ENST00000467124 SHDQ96IW2 340 aa6.13□□□□□ -1.43
VPS13A-209ENST00000467124 CORO1BQ9BR76 489 aa6.13□□□□□ -1.43
VPS13A-209ENST00000467124 CACNA2D2Q9NY47 1150 aa6.13□□□□□ -1.43
VPS13A-209ENST00000467124 TMA7Q9Y2S6 64 aaKnown RBP6.13□□□□□ -1.43
VPS13A-209ENST00000467124 R3HCC1Q9Y3T6 440 aaKnown RBP6.13□□□□□ -1.43
VPS13A-209ENST00000467124 SYNGAP1Q96PV0 1343 aa6.13□□□□□ -1.43
VPS13A-209ENST00000467124 GNB5O14775 395 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 KLF4O43474 513 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 CILPO75339 1184 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 CTSBP07858 339 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 EIF6P56537 245 aaKnown RBP6.12□□□□□ -1.43
VPS13A-209ENST00000467124 RAC1P63000 192 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 MPP2Q14168 576 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 PPP2R5EQ16537 467 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 SOGA3Q5TF21 947 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 ZNF385CQ66K41 422 aaPredicted RBP6.12□□□□□ -1.43
VPS13A-209ENST00000467124 RUFY4Q6ZNE9 571 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 SVOPQ8N4V2 548 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 CELF2-AS1Q8N7Q2 184 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 NEDD1Q8NHV4 660 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 GPBAR1Q8TDU6 330 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 SRPK1Q96SB4 655 aaKnown RBP6.12□□□□□ -1.43
VPS13A-209ENST00000467124 CRBNQ96SW2 442 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 ANTXR1Q9H6X2 564 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 NOP53Q9NZM5 478 aaKnown RBP6.12□□□□□ -1.43
VPS13A-209ENST00000467124 PCDHA4Q9UN74 947 aa6.12□□□□□ -1.43
VPS13A-209ENST00000467124 POLR3KQ9Y2Y1 108 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms