RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 YIPF2Q9BWQ6 316 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 OSBPL1AQ9BXW6 950 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 CCDC86Q9H6F5 360 aaKnown RBP6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 DCTN4Q9UJW0 460 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 PPP1R9AQ9ULJ8 1098 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 AP4E1Q9UPM8 1137 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 TRAK1Q9UPV9 953 aa6.06□□□□□ -1.44
GTF3C3-209ENST00000466862 ZNF862O60290 1169 aa6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 GADD45BO75293 160 aaPredicted RBP6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 NFICP08651 508 aa6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 PDE4CQ08493 712 aa6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 ENOX2Q16206 610 aaKnown RBP6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 ERICH6Q7L0X2 663 aa6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 WFDC3Q8IUB2 231 aa6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 TBC1D32Q96NH3 1257 aa6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 ZFYVE1Q9HBF4 777 aa6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 ATG3Q9NT62 314 aa6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 CRIM1Q9NZV1 1036 aa6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 ADGRE2Q9UHX3 823 aa6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 LEMD3Q9Y2U8 911 aa6.05□□□□□ -1.44
GTF3C3-209ENST00000466862 WNT11O96014 354 aa6.04□□□□□ -1.44
GTF3C3-209ENST00000466862 IRAK1P51617 712 aa6.04□□□□□ -1.44
GTF3C3-209ENST00000466862 MAP7Q14244 749 aa6.04□□□□□ -1.44
GTF3C3-209ENST00000466862 PDE3AQ14432 1141 aa6.04□□□□□ -1.44
GTF3C3-209ENST00000466862 KIF4BQ2VIQ3 1234 aa6.04□□□□□ -1.44
GTF3C3-209ENST00000466862 DYMQ7RTS9 669 aa6.04□□□□□ -1.44
GTF3C3-209ENST00000466862 C3orf58Q8NDZ4 430 aa6.04□□□□□ -1.44
GTF3C3-209ENST00000466862 DDX54Q8TDD1 881 aaKnown RBP6.04□□□□□ -1.44
GTF3C3-209ENST00000466862 FMNL2Q96PY5 1086 aa6.04□□□□□ -1.44
GTF3C3-209ENST00000466862 KRT82Q9NSB4 513 aa6.04□□□□□ -1.44
GTF3C3-209ENST00000466862 CCDC39Q9UFE4 941 aa6.04□□□□□ -1.44
GTF3C3-209ENST00000466862 PAX4O43316 350 aa6.03□□□□□ -1.44
GTF3C3-209ENST00000466862 GSTP1P09211 210 aaKnown RBP6.03□□□□□ -1.44
GTF3C3-209ENST00000466862 FMR1Q06787 632 aaKnown RBP eCLIP6.03□□□□□ -1.44
GTF3C3-209ENST00000466862 COL19A1Q14993 1142 aa6.03□□□□□ -1.44
GTF3C3-209ENST00000466862 ZNF765Q7L2R6 523 aa6.03□□□□□ -1.44
GTF3C3-209ENST00000466862 VSIG10LQ86VR7 867 aa6.03□□□□□ -1.44
GTF3C3-209ENST00000466862 ABI1Q8IZP0 508 aa6.03□□□□□ -1.44
GTF3C3-209ENST00000466862 GIMAP7Q8NHV1 300 aa6.03□□□□□ -1.44
GTF3C3-209ENST00000466862 TMC1Q8TDI8 760 aa6.03□□□□□ -1.44
GTF3C3-209ENST00000466862 STK35Q8TDR2 534 aa6.03□□□□□ -1.44
GTF3C3-209ENST00000466862 BCO2Q9BYV7 579 aa6.03□□□□□ -1.44
GTF3C3-209ENST00000466862 CACNA2D2Q9NY47 1150 aa6.03□□□□□ -1.44
GTF3C3-209ENST00000466862 PNMA6FA0A0J9YX94 578 aa6.02□□□□□ -1.45
GTF3C3-209ENST00000466862 TAL1P17542 331 aaPredicted RBP6.02□□□□□ -1.45
GTF3C3-209ENST00000466862 LIG1P18858 919 aa6.02□□□□□ -1.45
GTF3C3-209ENST00000466862 FCGRTP55899 365 aa6.02□□□□□ -1.45
GTF3C3-209ENST00000466862 CBLL1Q75N03 491 aa6.02□□□□□ -1.45
GTF3C3-209ENST00000466862 FANCD2OSQ96PS1 177 aa6.02□□□□□ -1.45
GTF3C3-209ENST00000466862 ASPAP45381 313 aa6.01□□□□□ -1.45
GTF3C3-209ENST00000466862 ZNF157P51786 506 aaPredicted RBP6.01□□□□□ -1.45
GTF3C3-209ENST00000466862 ID3Q02535 119 aa6.01□□□□□ -1.45
GTF3C3-209ENST00000466862 ZNF252P-AS1Q0IIN9 211 aa6.01□□□□□ -1.45
GTF3C3-209ENST00000466862 DTHD1Q6ZMT9 781 aa6.01□□□□□ -1.45
GTF3C3-209ENST00000466862 RAD18Q9NS91 495 aa6.01□□□□□ -1.45
GTF3C3-209ENST00000466862 ZC3H7BQ9UGR2 993 aaKnown RBP6.01□□□□□ -1.45
GTF3C3-209ENST00000466862 DAGLAQ9Y4D2 1042 aa6.01□□□□□ -1.45
GTF3C3-209ENST00000466862 CYP26A1O43174 497 aa6□□□□□ -1.45
GTF3C3-209ENST00000466862 NEFMP07197 916 aa6□□□□□ -1.45
GTF3C3-209ENST00000466862 XRCC5P13010 732 aaKnown RBP6□□□□□ -1.45
GTF3C3-209ENST00000466862 MAPK1P28482 360 aa6□□□□□ -1.45
GTF3C3-209ENST00000466862 LARP7Q4G0J3 582 aaKnown RBP eCLIP6□□□□□ -1.45
GTF3C3-209ENST00000466862 NXPE4Q6UWF7 544 aa6□□□□□ -1.45
GTF3C3-209ENST00000466862 SETDB2Q96T68 719 aa6□□□□□ -1.45
GTF3C3-209ENST00000466862 DISC1Q9NRI5 854 aa6□□□□□ -1.45
GTF3C3-209ENST00000466862 TMEM39AQ9NV64 488 aa6□□□□□ -1.45
GTF3C3-209ENST00000466862 BSDC1Q9NW68 430 aaPredicted RBP6□□□□□ -1.45
GTF3C3-209ENST00000466862 BIN2Q9UBW5 565 aaPredicted RBP6□□□□□ -1.45
GTF3C3-209ENST00000466862 GPN3Q9UHW5 284 aaPredicted RBP6□□□□□ -1.45
GTF3C3-209ENST00000466862 U3KQE9 123 aa6□□□□□ -1.45
GTF3C3-209ENST00000466862 TXKP42681 527 aa5.99□□□□□ -1.45
GTF3C3-209ENST00000466862 SULF2Q8IWU5 870 aa5.99□□□□□ -1.45
GTF3C3-209ENST00000466862 FBF1Q8TES7 1133 aa5.99□□□□□ -1.45
GTF3C3-209ENST00000466862 ANKRD24Q8TF21 1146 aa5.99□□□□□ -1.45
GTF3C3-209ENST00000466862 ZC3H12CQ9C0D7 883 aaKnown RBP5.99□□□□□ -1.45
GTF3C3-209ENST00000466862 ATXN3LQ9H3M9 355 aa5.99□□□□□ -1.45
GTF3C3-209ENST00000466862 PAK6Q9NQU5 681 aaPredicted RBP5.99□□□□□ -1.45
GTF3C3-209ENST00000466862 ANGEL1Q9UNK9 670 aaKnown RBP5.99□□□□□ -1.45
GTF3C3-209ENST00000466862 NTF4P34130 210 aa5.98□□□□□ -1.45
GTF3C3-209ENST00000466862 CYP27A1Q02318 531 aa5.98□□□□□ -1.45
GTF3C3-209ENST00000466862 CDK5R2Q13319 367 aa5.98□□□□□ -1.45
GTF3C3-209ENST00000466862 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
GTF3C3-209ENST00000466862 OGFOD3Q6PK18 319 aa5.98□□□□□ -1.45
GTF3C3-209ENST00000466862 ASB16Q96NS5 453 aa5.98□□□□□ -1.45
GTF3C3-209ENST00000466862 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
GTF3C3-209ENST00000466862 NLRP2Q9NX02 1062 aa5.98□□□□□ -1.45
GTF3C3-209ENST00000466862 ENC1O14682 589 aa5.97□□□□□ -1.45
GTF3C3-209ENST00000466862 NME2P22392 152 aa5.97□□□□□ -1.45
GTF3C3-209ENST00000466862 PPP2R3AQ06190 1150 aa5.97□□□□□ -1.45
GTF3C3-209ENST00000466862 TTLL4Q14679 1199 aa5.97□□□□□ -1.45
GTF3C3-209ENST00000466862 ZC3H12AQ5D1E8 599 aaKnown RBP5.97□□□□□ -1.45
GTF3C3-209ENST00000466862 RASIP1Q5U651 963 aa5.97□□□□□ -1.45
GTF3C3-209ENST00000466862 FBXL18Q96ME1 805 aa5.97□□□□□ -1.45
GTF3C3-209ENST00000466862 NECAB3Q96P71 396 aaPredicted RBP5.97□□□□□ -1.45
GTF3C3-209ENST00000466862 OSBPL7Q9BZF2 842 aa5.97□□□□□ -1.45
GTF3C3-209ENST00000466862 RNF114Q9Y508 228 aa5.97□□□□□ -1.45
GTF3C3-209ENST00000466862 IVNS1ABPQ9Y6Y0 642 aa5.97□□□□□ -1.45
GTF3C3-209ENST00000466862 PAGE1O75459 146 aa5.96□□□□□ -1.46
GTF3C3-209ENST00000466862 YBX3P16989 372 aaKnown RBP eCLIP5.96□□□□□ -1.46
GTF3C3-209ENST00000466862 ITGB5P18084 799 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms