RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 NEDD4P46934 1319 aa24.04■■□□□ 1.44
CCDC78-207ENST00000466708 IRS2Q9Y4H2 1338 aa24.04■■□□□ 1.44
CCDC78-207ENST00000466708 ADGRA1Q86SQ6 560 aa24.04■■□□□ 1.44
CCDC78-207ENST00000466708 RIOK1Q9BRS2 568 aaKnown RBP24.04■■□□□ 1.44
CCDC78-207ENST00000466708 MTA3Q9BTC8 594 aa24.04■■□□□ 1.44
CCDC78-207ENST00000466708 RNF41Q9H4P4 317 aaPredicted RBP24.04■■□□□ 1.44
CCDC78-207ENST00000466708 XDHP47989 1333 aa24.03■■□□□ 1.44
CCDC78-207ENST00000466708 TFCP2L1Q9NZI6 479 aa24.03■■□□□ 1.44
CCDC78-207ENST00000466708 ANKIB1Q9P2G1 1089 aa24.03■■□□□ 1.44
CCDC78-207ENST00000466708 LIFRP42702 1097 aa24.03■■□□□ 1.44
CCDC78-207ENST00000466708 CTDSPL2Q05D32 466 aa24.03■■□□□ 1.44
CCDC78-207ENST00000466708 RGS22Q8NE09 1264 aa24.03■■□□□ 1.44
CCDC78-207ENST00000466708 IGDCC4Q8TDY8 1250 aa24.03■■□□□ 1.44
CCDC78-207ENST00000466708 CPLX1O14810 134 aa24.02■■□□□ 1.44
CCDC78-207ENST00000466708 LETM1O95202 739 aaPredicted RBP24.02■■□□□ 1.44
CCDC78-207ENST00000466708 GIMAP6Q6P9H5 292 aa24.02■■□□□ 1.44
CCDC78-207ENST00000466708 SGMS1Q86VZ5 419 aa24.02■■□□□ 1.44
CCDC78-207ENST00000466708 ANAPC4Q9UJX5 808 aa24.02■■□□□ 1.44
CCDC78-207ENST00000466708 SYCE3A1L190 88 aa24.01■■□□□ 1.43
CCDC78-207ENST00000466708 CCDC183Q5T5S1 534 aa24.01■■□□□ 1.43
CCDC78-207ENST00000466708 SPTY2D1Q68D10 685 aaPredicted RBP24.01■■□□□ 1.43
CCDC78-207ENST00000466708 C15orf52Q6ZUT6 534 aaKnown RBP24.01■■□□□ 1.43
CCDC78-207ENST00000466708 PROM2Q8N271 834 aa24.01■■□□□ 1.43
CCDC78-207ENST00000466708 NSUN4Q96CB9 384 aaKnown RBP24.01■■□□□ 1.43
CCDC78-207ENST00000466708 RBM17Q96I25 401 aaKnown RBP24.01■■□□□ 1.43
CCDC78-207ENST00000466708 PANK2Q9BZ23 570 aa24.01■■□□□ 1.43
CCDC78-207ENST00000466708 PLSCR1O15162 318 aa24■■□□□ 1.43
CCDC78-207ENST00000466708 TTC6Q86TZ1 520 aa24■■□□□ 1.43
CCDC78-207ENST00000466708 BRIP1Q9BX63 1249 aa24■■□□□ 1.43
CCDC78-207ENST00000466708 ZSWIM5Q9P217 1185 aa24■■□□□ 1.43
CCDC78-207ENST00000466708 FDPSP14324 419 aaKnown RBP24■■□□□ 1.43
CCDC78-207ENST00000466708 ATL3Q6DD88 541 aa24■■□□□ 1.43
CCDC78-207ENST00000466708 SPATA32Q96LK8 384 aa24■■□□□ 1.43
CCDC78-207ENST00000466708 CFAP45Q9UL16 551 aa24■■□□□ 1.43
CCDC78-207ENST00000466708 KDM4AO75164 1064 aa23.99■■□□□ 1.43
CCDC78-207ENST00000466708 CDKL5O76039 1030 aa23.99■■□□□ 1.43
CCDC78-207ENST00000466708 MECOMQ03112 1051 aa23.99■■□□□ 1.43
CCDC78-207ENST00000466708 PPARAQ07869 468 aa23.99■■□□□ 1.43
CCDC78-207ENST00000466708 TMEM67Q5HYA8 995 aa23.99■■□□□ 1.43
CCDC78-207ENST00000466708 FAM173BQ6P4H8 233 aa23.99■■□□□ 1.43
CCDC78-207ENST00000466708 APOA5Q6Q788 366 aa23.99■■□□□ 1.43
CCDC78-207ENST00000466708 MAST2Q6P0Q8 1798 aa23.99■■□□□ 1.43
CCDC78-207ENST00000466708 CCDC88AQ3V6T2 1871 aa23.99■■□□□ 1.43
CCDC78-207ENST00000466708 METAP2P50579 478 aaKnown RBP eCLIP23.98■■□□□ 1.43
CCDC78-207ENST00000466708 SART3Q15020 963 aaKnown RBP23.98■■□□□ 1.43
CCDC78-207ENST00000466708 CPLX2Q6PUV4 134 aaKnown RBP23.98■■□□□ 1.43
CCDC78-207ENST00000466708 TXNRD3Q86VQ6 643 aa23.98■■□□□ 1.43
CCDC78-207ENST00000466708 ZNF384Q8TF68 577 aa23.98■■□□□ 1.43
CCDC78-207ENST00000466708 LY9Q9HBG7 655 aa23.98■■□□□ 1.43
CCDC78-207ENST00000466708 IFIT3O14879 490 aaKnown RBP23.98■■□□□ 1.43
CCDC78-207ENST00000466708 BBOX1O75936 387 aa23.98■■□□□ 1.43
CCDC78-207ENST00000466708 HOXA10P31260 410 aaPredicted RBP23.98■■□□□ 1.43
CCDC78-207ENST00000466708 NASPP49321 788 aaPredicted RBP23.98■■□□□ 1.43
CCDC78-207ENST00000466708 NKX2-3Q8TAU0 364 aa23.98■■□□□ 1.43
CCDC78-207ENST00000466708 WDR66Q8TBY9 1149 aa23.98■■□□□ 1.43
CCDC78-207ENST00000466708 ORC3Q9UBD5 711 aaPredicted RBP23.98■■□□□ 1.43
CCDC78-207ENST00000466708 KLRG2A4D1S0 409 aaPredicted RBP23.97■■□□□ 1.43
CCDC78-207ENST00000466708 POLRMTO00411 1230 aaKnown RBP23.97■■□□□ 1.43
CCDC78-207ENST00000466708 CHAF1AQ13111 956 aaPredicted RBP23.97■■□□□ 1.43
CCDC78-207ENST00000466708 NFXL1Q6ZNB6 911 aa23.97■■□□□ 1.43
CCDC78-207ENST00000466708 ZNF804AQ7Z570 1209 aa23.97■■□□□ 1.43
CCDC78-207ENST00000466708 TMTC2Q8N394 836 aa23.97■■□□□ 1.43
CCDC78-207ENST00000466708 SDR42E1Q8WUS8 393 aa23.97■■□□□ 1.43
CCDC78-207ENST00000466708 LEO1Q8WVC0 666 aaPredicted RBP23.97■■□□□ 1.43
CCDC78-207ENST00000466708 TACC3Q9Y6A5 838 aa23.97■■□□□ 1.43
CCDC78-207ENST00000466708 ZBTB43O43298 467 aa23.96■■□□□ 1.43
CCDC78-207ENST00000466708 PCP11498 1178 aaKnown RBP23.96■■□□□ 1.43
CCDC78-207ENST00000466708 TDRD7Q8NHU6 1098 aaKnown RBP23.96■■□□□ 1.43
CCDC78-207ENST00000466708 INCENPQ9NQS7 918 aa23.96■■□□□ 1.43
CCDC78-207ENST00000466708 TFIP11Q9UBB9 837 aaKnown RBP23.96■■□□□ 1.43
CCDC78-207ENST00000466708 ATP2B4P23634 1241 aa23.96■■□□□ 1.43
CCDC78-207ENST00000466708 DYNLL1P63167 89 aaKnown RBP23.96■■□□□ 1.43
CCDC78-207ENST00000466708 DDR1Q08345 913 aa23.96■■□□□ 1.43
CCDC78-207ENST00000466708 CRAMP1Q96RY5 1269 aa23.96■■□□□ 1.43
CCDC78-207ENST00000466708 MYH15Q9Y2K3 1946 aa23.95■■□□□ 1.42
CCDC78-207ENST00000466708 CCDC69A6NI79 296 aa23.95■■□□□ 1.42
CCDC78-207ENST00000466708 SYNE3Q6ZMZ3 975 aa23.95■■□□□ 1.42
CCDC78-207ENST00000466708 TMC4Q7Z404 712 aa23.95■■□□□ 1.42
CCDC78-207ENST00000466708 ANP32BQ92688 251 aaKnown RBP23.95■■□□□ 1.42
CCDC78-207ENST00000466708 C8orf76Q96K31 380 aa23.95■■□□□ 1.42
CCDC78-207ENST00000466708 CRNKL1Q9BZJ0 848 aaKnown RBP23.95■■□□□ 1.42
CCDC78-207ENST00000466708 TOMM22Q9NS69 142 aa23.95■■□□□ 1.42
CCDC78-207ENST00000466708 ERICH2A1L162 156 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 GOLGA6L4A6NEF3 574 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 PRDX5P30044 214 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 NLGN1Q8N2Q7 840 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 ZNF396Q96N95 335 aaPredicted RBP23.94■■□□□ 1.42
CCDC78-207ENST00000466708 RBSNQ9H1K0 784 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 TSPY26PQ9H489 355 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 SLC12A7Q9Y666 1083 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 KIAA1551Q9HCM1 1747 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 NID2Q14112 1375 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 MINDY4BA8MYZ0 360 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 RCAN1P53805 252 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 RRP12Q5JTH9 1297 aaKnown RBP23.94■■□□□ 1.42
CCDC78-207ENST00000466708 FLAD1Q8NFF5 587 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 FBXO18Q8NFZ0 1043 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 ESR2Q92731 530 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 ATP8A2Q9NTI2 1148 aa23.94■■□□□ 1.42
CCDC78-207ENST00000466708 GPSM2P81274 684 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms