RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 ZBTB1Q9Y2K1 713 aa7.79□□□□□ -1.16
PSMB4-202ENST00000466425 CCDC9Q9Y3X0 531 aaKnown RBP7.79□□□□□ -1.16
PSMB4-202ENST00000466425 RGPD3A6NKT7 1758 aaPredicted RBP7.79□□□□□ -1.16
PSMB4-202ENST00000466425 RGPD4Q7Z3J3 1758 aa7.79□□□□□ -1.16
PSMB4-202ENST00000466425 TNS1Q9HBL0 1735 aaKnown RBP7.78□□□□□ -1.16
PSMB4-202ENST00000466425 LOC102724428A0A0B4J2F2 783 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 SOCS7O14512 581 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 ST8SIA5O15466 376 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 F13A1P00488 732 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 XRCC6P12956 609 aaKnown RBP eCLIP7.78□□□□□ -1.16
PSMB4-202ENST00000466425 SYT1P21579 422 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 GPTP24298 496 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 GJB2P29033 226 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 ATP6V1AP38606 617 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 APLP1P51693 650 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 EIF5P55010 431 aaKnown RBP7.78□□□□□ -1.16
PSMB4-202ENST00000466425 SIK1P57059 783 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 HLFQ16534 295 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 CCDC152Q4G0S7 254 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 CAVIN1Q6NZI2 390 aaKnown RBP7.78□□□□□ -1.16
PSMB4-202ENST00000466425 CLEC4GQ6UXB4 293 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 LPIN2Q92539 896 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 EDC3Q96F86 508 aaKnown RBP7.78□□□□□ -1.16
PSMB4-202ENST00000466425 XAGE2Q96GT9 111 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 ZNF594Q96JF6 807 aaPredicted RBP7.78□□□□□ -1.16
PSMB4-202ENST00000466425 GJD4Q96KN9 370 aaPredicted RBP7.78□□□□□ -1.16
PSMB4-202ENST00000466425 LLPHQ9BRT6 129 aaKnown RBP7.78□□□□□ -1.16
PSMB4-202ENST00000466425 PUS3Q9BZE2 481 aaKnown RBP7.78□□□□□ -1.16
PSMB4-202ENST00000466425 TBC1D2BQ9UPU7 963 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 RIPOR2Q9Y4F9 1068 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 SHANK3Q9BYB0 1731 aa7.78□□□□□ -1.16
PSMB4-202ENST00000466425 ARFGEF2Q9Y6D5 1785 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 SLC5A1P13866 664 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 CRKLP46109 303 aaKnown RBP7.77□□□□□ -1.17
PSMB4-202ENST00000466425 COPS2P61201 443 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 UBE2HP62256 183 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 HMGN5P82970 282 aaKnown RBP7.77□□□□□ -1.17
PSMB4-202ENST00000466425 FKBP4Q02790 459 aaKnown RBP eCLIP7.77□□□□□ -1.17
PSMB4-202ENST00000466425 PUM3Q15397 648 aaKnown RBP7.77□□□□□ -1.17
PSMB4-202ENST00000466425 ME3Q16798 604 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 IMMTQ16891 758 aaKnown RBP7.77□□□□□ -1.17
PSMB4-202ENST00000466425 WASHC4Q2M389 1173 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 ZSCAN23Q3MJ62 389 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 FOXD4L5Q5VV16 416 aaPredicted RBP7.77□□□□□ -1.17
PSMB4-202ENST00000466425 LARP1BQ659C4 914 aaKnown RBP7.77□□□□□ -1.17
PSMB4-202ENST00000466425 DHX32Q7L7V1 743 aaKnown RBP7.77□□□□□ -1.17
PSMB4-202ENST00000466425 FOXD4L4Q8WXT5 416 aaPredicted RBP7.77□□□□□ -1.17
PSMB4-202ENST00000466425 APPBP2Q92624 585 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 SLC4A9Q96Q91 983 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 MPHOSPH8Q99549 860 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 AAASQ9NRG9 546 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 BRPF3Q9ULD4 1205 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 TPCN1Q9ULQ1 816 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 TUBGCP6Q96RT7 1819 aa7.77□□□□□ -1.17
PSMB4-202ENST00000466425 ITGB4P16144 1822 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 RTL9Q8NET4 1388 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 FAM187AA6NFU0 413 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 DHX16O60231 1041 aaKnown RBP7.76□□□□□ -1.17
PSMB4-202ENST00000466425 PDE8BO95263 885 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 CYP21A2P08686 494 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 HSPD1P10809 573 aaKnown RBP7.76□□□□□ -1.17
PSMB4-202ENST00000466425 CPA1P15085 419 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 IGHMBP2P38935 993 aaKnown RBP7.76□□□□□ -1.17
PSMB4-202ENST00000466425 NASPP49321 788 aaPredicted RBP7.76□□□□□ -1.17
PSMB4-202ENST00000466425 KRT85P78386 507 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 CCDC173Q0VFZ6 552 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 INTS5Q6P9B9 1019 aaKnown RBP7.76□□□□□ -1.17
PSMB4-202ENST00000466425 LRSAM1Q6UWE0 723 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 FAM43AQ8N2R8 423 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 FBXL16Q8N461 479 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 MARCH10Q8NA82 808 aaPredicted RBP7.76□□□□□ -1.17
PSMB4-202ENST00000466425 RDH13Q8NBN7 331 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 TRIM44Q96DX7 344 aaPredicted RBP7.76□□□□□ -1.17
PSMB4-202ENST00000466425 CDC5LQ99459 802 aaKnown RBP7.76□□□□□ -1.17
PSMB4-202ENST00000466425 MTRQ99707 1265 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 PRR14Q9BWN1 585 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 FAM117AQ9C073 453 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 GREM2Q9H772 168 aa7.76□□□□□ -1.17
PSMB4-202ENST00000466425 VPS37CA5D8V6 355 aaPredicted RBP7.75□□□□□ -1.17
PSMB4-202ENST00000466425 PFKFB2O60825 505 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 CAMTA2O94983 1202 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 CFHP08603 1231 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 HMGB2P26583 209 aaKnown RBP7.75□□□□□ -1.17
PSMB4-202ENST00000466425 ARID4AP29374 1257 aaPredicted RBP7.75□□□□□ -1.17
PSMB4-202ENST00000466425 ZAP70P43403 619 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 TRDNQ13061 729 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 TOB2Q14106 344 aaPredicted RBP7.75□□□□□ -1.17
PSMB4-202ENST00000466425 UBE3CQ15386 1083 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 KMT5BQ4FZB7 885 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 ATL3Q6DD88 541 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 CCDC129Q6ZRS4 1044 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 Q6ZUG5 572 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 USP48Q86UV5 1035 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 FAM184AQ8NB25 1140 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 GPT2Q8TD30 523 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 GTF3C6Q969F1 213 aa7.75□□□□□ -1.17
PSMB4-202ENST00000466425 ZNF274Q96GC6 653 aaPredicted RBP7.75□□□□□ -1.17
PSMB4-202ENST00000466425 SCAND2PQ9GZW5 306 aaPredicted RBP7.75□□□□□ -1.17
PSMB4-202ENST00000466425 ZSCAN16Q9H4T2 348 aaPredicted RBP7.75□□□□□ -1.17
PSMB4-202ENST00000466425 IL21Q9HBE4 155 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms