RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 DAGLAQ9Y4D2 1042 aa4.71□□□□□ -1.66
CCDC93-205ENST00000466171 SYNGAP1Q96PV0 1343 aa4.71□□□□□ -1.66
CCDC93-205ENST00000466171 NDUFB5O43674 189 aa4.7□□□□□ -1.66
CCDC93-205ENST00000466171 AOC2O75106 756 aa4.7□□□□□ -1.66
CCDC93-205ENST00000466171 CPNE3O75131 537 aaKnown RBP4.7□□□□□ -1.66
CCDC93-205ENST00000466171 SLFN14P0C7P3 912 aa4.7□□□□□ -1.66
CCDC93-205ENST00000466171 ITGB5P18084 799 aa4.7□□□□□ -1.66
CCDC93-205ENST00000466171 PLCL1Q15111 1095 aa4.7□□□□□ -1.66
CCDC93-205ENST00000466171 OGFOD3Q6PK18 319 aa4.7□□□□□ -1.66
CCDC93-205ENST00000466171 GLYCTKQ8IVS8 523 aa4.7□□□□□ -1.66
CCDC93-205ENST00000466171 FAM105AQ9NUU6 356 aa4.7□□□□□ -1.66
CCDC93-205ENST00000466171 CTSBP07858 339 aa4.69□□□□□ -1.66
CCDC93-205ENST00000466171 ITPKAP23677 461 aa4.69□□□□□ -1.66
CCDC93-205ENST00000466171 PTPN12Q05209 780 aaKnown RBP4.69□□□□□ -1.66
CCDC93-205ENST00000466171 NFXL1Q6ZNB6 911 aa4.69□□□□□ -1.66
CCDC93-205ENST00000466171 CCDC82Q8N4S0 544 aa4.69□□□□□ -1.66
CCDC93-205ENST00000466171 ATXN3LQ9H3M9 355 aa4.69□□□□□ -1.66
CCDC93-205ENST00000466171 GSX1Q9H4S2 264 aaPredicted RBP4.69□□□□□ -1.66
CCDC93-205ENST00000466171 ZNF576Q9H609 170 aa4.69□□□□□ -1.66
CCDC93-205ENST00000466171 ICMTO60725 284 aa4.68□□□□□ -1.66
CCDC93-205ENST00000466171 RPS26P11Q5JNZ5 115 aaPredicted RBP4.68□□□□□ -1.66
CCDC93-205ENST00000466171 ARHGAP27Q6ZUM4 889 aa4.68□□□□□ -1.66
CCDC93-205ENST00000466171 BCL7CQ8WUZ0 217 aaPredicted RBP4.68□□□□□ -1.66
CCDC93-205ENST00000466171 TRIM56Q9BRZ2 755 aaKnown RBP4.68□□□□□ -1.66
CCDC93-205ENST00000466171 WDR18Q9BV38 432 aa4.68□□□□□ -1.66
CCDC93-205ENST00000466171 C1GALT1Q9NS00 363 aa4.68□□□□□ -1.66
CCDC93-205ENST00000466171 TRAK1Q9UPV9 953 aa4.68□□□□□ -1.66
CCDC93-205ENST00000466171 H3BRB1 525 aa4.67□□□□□ -1.66
CCDC93-205ENST00000466171 GADD45BO75293 160 aaPredicted RBP4.67□□□□□ -1.66
CCDC93-205ENST00000466171 PHLDB3Q6NSJ2 640 aa4.67□□□□□ -1.66
CCDC93-205ENST00000466171 SEZ6L2Q6UXD5 910 aa4.67□□□□□ -1.66
CCDC93-205ENST00000466171 NETO1Q8TDF5 533 aa4.67□□□□□ -1.66
CCDC93-205ENST00000466171 CITED4Q96RK1 184 aa4.67□□□□□ -1.66
CCDC93-205ENST00000466171 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
CCDC93-205ENST00000466171 DNAJC25Q9H1X3 360 aa4.67□□□□□ -1.66
CCDC93-205ENST00000466171 TUT1Q9H6E5 874 aaKnown RBP4.67□□□□□ -1.66
CCDC93-205ENST00000466171 LGR6Q9HBX8 967 aa4.67□□□□□ -1.66
CCDC93-205ENST00000466171 NPHS2Q9NP85 383 aa4.67□□□□□ -1.66
CCDC93-205ENST00000466171 PPP4R2Q9NY27 417 aa4.67□□□□□ -1.66
CCDC93-205ENST00000466171 TMPRSS2O15393 492 aa4.66□□□□□ -1.66
CCDC93-205ENST00000466171 ECEL1O95672 775 aa4.66□□□□□ -1.66
CCDC93-205ENST00000466171 LIG1P18858 919 aa4.66□□□□□ -1.66
CCDC93-205ENST00000466171 ID3Q02535 119 aa4.66□□□□□ -1.66
CCDC93-205ENST00000466171 PPP2R3AQ06190 1150 aa4.66□□□□□ -1.66
CCDC93-205ENST00000466171 ZNF792Q3KQV3 632 aa4.66□□□□□ -1.66
CCDC93-205ENST00000466171 USPL1Q5W0Q7 1092 aa4.66□□□□□ -1.66
CCDC93-205ENST00000466171 TMC1Q8TDI8 760 aa4.66□□□□□ -1.66
CCDC93-205ENST00000466171 PPP1R9AQ9ULJ8 1098 aa4.66□□□□□ -1.66
CCDC93-205ENST00000466171 USTQ9Y2C2 406 aa4.66□□□□□ -1.66
CCDC93-205ENST00000466171 TMEM238LA0A1B0GVL6 79 aa4.65□□□□□ -1.67
CCDC93-205ENST00000466171 DYNC1LI2O43237 492 aaPredicted RBP4.65□□□□□ -1.67
CCDC93-205ENST00000466171 RNGTTO60942 597 aaKnown RBP4.65□□□□□ -1.67
CCDC93-205ENST00000466171 FAM87AP0C7U9 286 aa4.65□□□□□ -1.67
CCDC93-205ENST00000466171 COL19A1Q14993 1142 aa4.65□□□□□ -1.67
CCDC93-205ENST00000466171 PKN1Q16512 942 aa4.65□□□□□ -1.67
CCDC93-205ENST00000466171 PRPF40BQ6NWY9 871 aaKnown RBP4.65□□□□□ -1.67
CCDC93-205ENST00000466171 ZNF574Q6ZN55 896 aaPredicted RBP4.65□□□□□ -1.67
CCDC93-205ENST00000466171 ATG4DQ86TL0 474 aaPredicted RBP4.65□□□□□ -1.67
CCDC93-205ENST00000466171 SMYD4Q8IYR2 804 aaPredicted RBP4.65□□□□□ -1.67
CCDC93-205ENST00000466171 CCDC74AQ96AQ1 378 aa4.65□□□□□ -1.67
CCDC93-205ENST00000466171 FANCD2OSQ96PS1 177 aa4.65□□□□□ -1.67
CCDC93-205ENST00000466171 KRT82Q9NSB4 513 aa4.65□□□□□ -1.67
CCDC93-205ENST00000466171 CRIM1Q9NZV1 1036 aa4.65□□□□□ -1.67
CCDC93-205ENST00000466171 VAV3Q9UKW4 847 aa4.65□□□□□ -1.67
CCDC93-205ENST00000466171 FARP2O94887 1054 aaPredicted RBP4.64□□□□□ -1.67
CCDC93-205ENST00000466171 PAPLNO95428 1278 aa4.64□□□□□ -1.67
CCDC93-205ENST00000466171 FUT4P22083 530 aa4.64□□□□□ -1.67
CCDC93-205ENST00000466171 ZNF157P51786 506 aaPredicted RBP4.64□□□□□ -1.67
CCDC93-205ENST00000466171 PRKCQQ04759 706 aa4.64□□□□□ -1.67
CCDC93-205ENST00000466171 CDK5R2Q13319 367 aa4.64□□□□□ -1.67
CCDC93-205ENST00000466171 ORC1Q13415 861 aa4.64□□□□□ -1.67
CCDC93-205ENST00000466171 DTHD1Q6ZMT9 781 aa4.64□□□□□ -1.67
CCDC93-205ENST00000466171 PI4K2BQ8TCG2 481 aa4.64□□□□□ -1.67
CCDC93-205ENST00000466171 FAM129BQ96TA1 746 aa4.64□□□□□ -1.67
CCDC93-205ENST00000466171 ZC3H12CQ9C0D7 883 aaKnown RBP4.64□□□□□ -1.67
CCDC93-205ENST00000466171 RC3H2Q9HBD1 1191 aaKnown RBP4.64□□□□□ -1.67
CCDC93-205ENST00000466171 MKNK2Q9HBH9 465 aa4.64□□□□□ -1.67
CCDC93-205ENST00000466171 ABCB6Q9NP58 842 aa4.64□□□□□ -1.67
CCDC93-205ENST00000466171 SSU72Q9NP77 194 aaKnown RBP4.64□□□□□ -1.67
CCDC93-205ENST00000466171 GPN3Q9UHW5 284 aaPredicted RBP4.64□□□□□ -1.67
CCDC93-205ENST00000466171 PCOLCE2Q9UKZ9 415 aa4.64□□□□□ -1.67
CCDC93-205ENST00000466171 TMEM265A0A087WTH1 108 aa4.63□□□□□ -1.67
CCDC93-205ENST00000466171 CARNS1A5YM72 827 aa4.63□□□□□ -1.67
CCDC93-205ENST00000466171 EIF1AYO14602 144 aaKnown RBP4.63□□□□□ -1.67
CCDC93-205ENST00000466171 GSTP1P09211 210 aaKnown RBP4.63□□□□□ -1.67
CCDC93-205ENST00000466171 BNIP3Q12983 259 aa4.63□□□□□ -1.67
CCDC93-205ENST00000466171 IFI16Q16666 785 aaKnown RBP4.63□□□□□ -1.67
CCDC93-205ENST00000466171 KIF4BQ2VIQ3 1234 aa4.63□□□□□ -1.67
CCDC93-205ENST00000466171 SPRED2Q7Z698 418 aa4.63□□□□□ -1.67
CCDC93-205ENST00000466171 PLD6Q8N2A8 252 aaKnown RBP4.63□□□□□ -1.67
CCDC93-205ENST00000466171 FAM168AQ92567 244 aa4.63□□□□□ -1.67
CCDC93-205ENST00000466171 KCNB2Q92953 911 aa4.63□□□□□ -1.67
CCDC93-205ENST00000466171 HRASLS5Q96KN8 279 aa4.63□□□□□ -1.67
CCDC93-205ENST00000466171 SLC38A3Q99624 504 aa4.63□□□□□ -1.67
CCDC93-205ENST00000466171 NIF3L1Q9GZT8 377 aa4.63□□□□□ -1.67
CCDC93-205ENST00000466171 CCDC86Q9H6F5 360 aaKnown RBP4.63□□□□□ -1.67
CCDC93-205ENST00000466171 NLRP2Q9NX02 1062 aa4.63□□□□□ -1.67
CCDC93-205ENST00000466171 CEACAM5P06731 702 aa4.62□□□□□ -1.67
CCDC93-205ENST00000466171 CD8BP10966 210 aa4.62□□□□□ -1.67
CCDC93-205ENST00000466171 XRCC5P13010 732 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms