RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 PTPN18Q99952 460 aa8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 TMEM106CQ9BVX2 250 aa8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 PCDHAC2Q9Y5I4 1007 aa8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 MED23Q9ULK4 1368 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 NEURL1BA8MQ27 555 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 SEMA3EO15041 775 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 PCCAP05165 728 aaPredicted RBP8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 ZBTB48P10074 688 aaPredicted RBP8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 SP3Q02447 781 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 PDE4DQ08499 809 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 POLA2Q14181 598 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 SLC4A8Q2Y0W8 1093 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 ALDH1L2Q3SY69 923 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 CCDC152Q4G0S7 254 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 APOBEC3FQ8IUX4 373 aaKnown RBP8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 ANKRD18AQ8IVF6 992 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 MRPL50Q8N5N7 158 aaKnown RBP8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 SLC17A8Q8NDX2 589 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 DNAAF4Q8WXU2 420 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 ZBED3Q96IU2 234 aaPredicted RBP8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 DEFB129Q9H1M3 183 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 YY1AP1Q9H869 796 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 CWC25Q9NXE8 425 aaPredicted RBP8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 RBM27Q9P2N5 1060 aaKnown RBP8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 ZSWIM8A7E2V4 1837 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 LAMB1P07942 1786 aa8.91□□□□□ -0.98
RPUSD3-212ENST00000466141 AOX1Q06278 1338 aa8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 F6X3S4 739 aa8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 CASP7P55210 303 aa8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 INHBEP58166 350 aa8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 SETDB1Q15047 1291 aa8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 CWF19L2Q2TBE0 894 aaKnown RBP8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 SLC9C1Q4G0N8 1177 aa8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 OTUD6BQ8N6M0 293 aa8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 KRI1Q8N9T8 703 aaKnown RBP8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 LINS1Q8NG48 757 aa8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 SH3TC2Q8TF17 1288 aa8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 MAP7D2Q96T17 732 aa8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 FAM117AQ9C073 453 aa8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 ARIH1Q9Y4X5 557 aaPredicted RBP8.9□□□□□ -0.98
RPUSD3-212ENST00000466141 PTPRCP08575 1304 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 MYO3BQ8WXR4 1341 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 CLRN2A0PK11 232 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 GOLIM4O00461 696 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 PDE8AO60658 829 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 CCT4P50991 539 aaKnown RBP8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 GTF2IP78347 998 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 NEXNQ0ZGT2 675 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 MKRN4PQ13434 485 aaPredicted RBP8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 GCKRQ14397 625 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 MAP3K11Q16584 847 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 CCDC96Q2M329 555 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 BEND3Q5T5X7 828 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 NBPF12Q5TAG4 269 aaPredicted RBP8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 STRIP1Q5VSL9 837 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 DRC1Q96MC2 740 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 ARHGAP39Q9C0H5 1083 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 MINPP1Q9UNW1 487 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 COL6A3P12111 3177 aa8.89□□□□□ -0.99
RPUSD3-212ENST00000466141 OTOFQ9HC10 1997 aa8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 ANKRD62A6NC57 917 aa8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 HMGB1P1B2RPK0 211 aaPredicted RBP8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 F8W031 263 aaPredicted RBP8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 ERCC3P19447 782 aa8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 SSR1P43307 286 aaKnown RBP8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 RARSP54136 660 aaKnown RBP8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 SLC20A2Q08357 652 aa8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 MYBPC2Q14324 1141 aa8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 TTLL5Q6EMB2 1281 aa8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 CERS5Q8N5B7 392 aa8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 RNF25Q96BH1 459 aaPredicted RBP8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 SHISA4Q96DD7 197 aa8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 COA1Q9GZY4 146 aa8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 GREM2Q9H772 168 aa8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 ELP3Q9H9T3 547 aa8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 SMC4Q9NTJ3 1288 aa8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 COL1A1P02452 1464 aaPredicted RBP8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 RANBP2P49792 3224 aaKnown RBP8.88□□□□□ -0.99
RPUSD3-212ENST00000466141 KIF16BQ96L93 1317 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 H7C1W4 665 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 TRIM66O15016 1216 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 PPP1R12BO60237 982 aaPredicted RBP8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 MARCH6O60337 910 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 USP2O75604 605 aaPredicted RBP8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 CTSWP56202 376 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 HDAC1Q13547 482 aaPredicted RBP8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 DLGAP5Q15398 846 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 SMYD5Q6GMV2 418 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 OTUD7BQ6GQQ9 843 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 UBE3BQ7Z3V4 1068 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 CDAN1Q8IWY9 1227 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 BRI3BPQ8WY22 251 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 DPF3Q92784 378 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 OPTNQ96CV9 577 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 CDC5LQ99459 802 aaKnown RBP8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 PLA2G12BQ9BX93 195 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 VEZTQ9HBM0 779 aa8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 GEMIN8Q9NWZ8 242 aaKnown RBP8.87□□□□□ -0.99
RPUSD3-212ENST00000466141 ZNF804BA4D1E1 1349 aa8.86□□□□□ -0.99
RPUSD3-212ENST00000466141 SNAP23O00161 211 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms